Contig Data
morexGenes
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Map Locations of contig_46729 (3810 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_46729

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62588 1 1758 bp AK354140 Available Available None





CDS Structure of MLOC_62588






Contig Sequence (3810 bp)

>contig_46729 3810 assembly3_WGSMorex_rbca.fasta
CAAGGGAGCATATGTGCTTTCAATGTACTAAAAGTTCTCACGCATATCCCTCTCGTCTTC
AATGATCTTATTAGCGCCACAAACAATTGCAAAGTGCTTATGAAGCACACCGAAGGCTTA
TCATGGTTTGATGTGTATGCAGCCAGACTGCGATCCTATATCGTCATTGAAAATCATGCC
TAAAATGGTTTCAAAATGTTCGTCGTCTTCTTCCACTTCGTATGACGACGAGTCCTCGAA
GACAATCTCCCTCGACCTCTTCATCTACAATTTAAACGGCTTGGTTCAATCCAAATGGCT
CGGTCAAAAAAGAAGTGAACGGAAAAACTAACCTAAACAAACCGCCGAACACTCGGTGGT
GGTGCACCGGCCGACCATTGTCATTTAGACCAAACCAGTGGTCAGTGACGTGTGTGAATG
ACCTGCAGCGGTGTGCACGCAAGGTCAGATGTAGCGTCCGACAAAAAATGAAGAAGCTTC
GAAGCAGTATGACGAATCGGCTATGGCGACGACGACGATGTTTCACCTTGATTCCAACGA
CATCGACGGTGGCCGGACAGGCTCGGCGTCGGGCAGAAGGGCGACAGAGGCCAAGGGAGG
CAACATGATAGCAGCGGGGCCGGATAGCGGTGCGTCAGTAAAAAGGCAGTGGCACGGGGT
GAGGTGAAGGAGAGGCTCTTCTTTTACTCTGAACGATGGAGGCCGAGTATATTTAGGGGA
AGGAGAGGCATCAGTGGATAATTTTTTTCTCCACTAATGATCTTAAGGAATCGGTTAGGT
GCACGTTAGAGGAGTAAAATTAACGATGGATAAGGGATGGGTTACAAAGAGTAATGCTAG
ATGTATTAAAAGTTAGGTATACGTTTTACGGGATTTATGTTTTGAAGGATTGGGATTGGA
TGTAGAAGGATGAAGGGGCCCACGCCCAGTGGCGGAGAACGAATAAATTTTGAGGTGGGG
CGAACTCACTAGCATGCCAAAAAAAGCCATTGCCAACAGCGCCGCTTTGCGGCGTGCCAG
CGGGCCTACATCCAGCAGGCTGGCCTGGATCAGTCGATCCCATGAGGTTTTTGCCGCCGT
CGTCGCCCTTGCCCTGCCCACTGGCTCATGCTATACGGTTCGTGCTGTCGTGTCACACGA
CGAGCGTGTGGTGCGTTGTTTGAGAAACTTGGCTAACTAATCGTGCGTGCATACAGGAGT
TCATGGGCTGGGTCACAATAAAGTAGCCCATGTGCATGTACGTTCTTCTTCGCCCAGCCT
CGCCCTACCGGCTCCTCCGCCCCTGTCCACACCCCTGAAAATAAGGGGAGAAGAGAATTA
TTTTTAAAAAGGTTACTTGAGTCTTTGTGGCTTCCTTCATAAATGAAGCATGGTTAGAAC
TGCCCTAACCAATCGAAATTGGTTTCTTGAGGAAACAATAGCAACGGAGTGAGACCAAAA
CGAGTATCATGGAGTTTTTTCTTTAAAGCAAACGAAGTCGCTCACATACACGAACGTGCA
CTCATTCCTATGAATGCACGCACGCACACCCTATCCTTATGAACATCTTTGAGAGACTAA
GCCGTCACATCATCTTGAGATTGATGAAGTCGTCACTGACGCCTTCGTTGTCACGGAAAC
GTGTCCTTCCAATGAAAGCACATCGCCGGAAGACTGAAATAAATTCAGGAAAATAGAAGT
ACCAATGTCAAGTCTAGGACTTGAATTCTGATGGACAAGGGATACCATACTCTTCTGACT
ATCCAACCACGGATTAGTTTGTAGTAGCATGGAGTTTTATTAGGTCTAGAGACCGCATGC
GGATTGCTCGCGATGCCGGCACAAAACCCGGAATGATCAGCAGGAAGAACAAGAACTGCA
GCCTGCAACCACAACGCCCTGGCATTCTCGAATTACTAATTCGCTCCATTGATTATCTCC
TCGGAGAGACTCCCCAGGGCAGAGTAGGAGGACCCGCCCTCCTCGACGGCCTTCCTGCAC
GCTGCCTTCATCTCCGCGGCCTTCTCCCTCGCCCTCTTCCCCTCCTCGGAGTCGCGCTCC
ATGAGCACCTTCACGGCCCGCTCCAGCTCCGACGCGGCGACGAAGTTGTTCCTCTTCCTG
TCCACCTCCATGGCCACGGCCACGCCCATGTAGGCCACCAGCGTGAACGCGTTCAGGTGC
TGCTCCGCGTACAGCGGCCATGGCACCATCGGCACGCCGAACCACAGGCTCTCCAGGGTC
GAGTTCCACCCGCCGTGCGTCACGAAGCCCCCCACAGAGGCGTGCGCCAGGATCTCCTTC
TGCGGAGCCTTGGTCGGCCACACCATGCCCTTCTCCTTTGTCCTCTCCAAGAACCCCTCC
GGGAGCAGCTCCCCGAGGTCCGCGTCCGAGGGCTGTCCGGGTCCCGCACCGGCTGCCGGC
GGGCCGCGCAGAACCCACAGGAAGCGCTGCCCGCTGCGCTCCAGTCCGTGGGCTATCTCG
TGCGCCTGAGGCGCCGTGGAGAACCCCATACTGCCGAAACAGAGGAGCACCACGGACGCC
GGAGGCTGCGCGTCCAGCCACCGCACGCATTCGTGTGTCTCCTCCGCTGGCGGCGTCAAG
GAGAGCACGGGGCCTACTGGATAGACCGTCGGGGCAGGAATTCCGGGCGTGCACCGGCCG
TCGCCGATGGCTGCAAGAACGCTCTGCTCCAGCTCGGTGACCGTGTTAATGATGACGCCC
TTGGCCTCCGTGATACGCCTGCCGTGGTACACGAACCACGTGTAGTTGGGGTTCTTCTTA
TCCATCACCGGAACCGGGAGGGACGACGGCGGCACCGGCGGCAGGCCAGGCACGCCGACC
ATGCCTTCCATCTCCTCGAACTCGACGGCGACCTCCTCGTGGAGCGCCGGCAAGCGCAGG
AGGAGCGCGTAGAAGGCGGCGTCGGCTGTGATGTAGACGTAGGCCGGCACGACTAGCTCC
CGGGACACGTCGAGCATCGTTGTGCAGAAGAAGTCGACGACGAGCGCGGCCACGGGGCAT
GCCAAGCCGGAGATGGCTGCCTTCACGTGGGCCGCGTGGAGCTGCACGAACCGGGAGACG
AACTCCTCGATGCCCAGGCAGTCCGTCGGGGGCTCGACGGCGGGGAGGTGCTGGAAGCGG
ATGTCCAGGCCGGACGCCTCCTCCCTTTGTATGTGGGCGGCGACCTCGGCCCTGTCGTTC
GCCGCCGGCGCCTGCATGACGAGCACCGTGAGCGACAGCCCGCCGCCGCTGCGGGCAAGC
AGCCGCTTGCCGGCGTCGAGCATGGACATGAGGTGGCCGGCGGACCAGACGGGCAGCAGC
ACGACGGTCGGGGTCTCCATTTGGTTGGTGCGCGATCGACTAGGAGCCTCGGACGGATGA
TGCTCCCTGTACTTGCTTGGTATCAAAGGTCGATAAAGATTTTGAGCGAGCGAAAGCGAG
TGATACGGTGGATCTTGCTTTTTGACCACGGACTGGACTTGTAGGCAAACTCTTCTAGAG
AAATAATAATTGTTTTTCATGGTAATACGTGTCTATATAGATATAAAGATCATAATATAA
ATCATGTATACATCAATCTGATAAAACTGAATATGTAGACATTTACACAAAGAAACATCT
GTCAAAGTAAAATTACAAACAAAACCAAAAACCTTTAAATTCGACACCAATGACAGTCAC
CTGCCTCTGACATCATCATAATATTCACCAAAAGAAAAAATGATGGATCACCTCCGCACT
CGAGCTTGACGAGACTCGATGATGATATGCAGCTTTACGTACCTTCAAGGTGACTAAGAG
CATCTGTAGTAGAACCCTCAAACCCTTAAA