Map Locations of contig_46722 (10483 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46722

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62583 1 269 bp AK366927 Available Available None





CDS Structure of MLOC_62583






Contig Sequence (10483 bp)

>contig_46722 10483 assembly3_WGSMorex_rbca.fasta
CCCAGCCGATCCCGATCTGGATCGGGCCCGAGCAGAGAGCGGCGATGGCGGCGGCGGCTA
CCAGGCGATCGAGCAAGGAGGGACCAGGCGAAAGAGGCAGCAGCCAGGAGAAGTGGCAGC
AGCCGGCGGAGGCAGGAGGTCACCGGCAGTGACTGGGCGAGGCAGGCGCCGGTGGGGTCG
AGGCAAGTGGCGGCCGTGGCAGAGGAGGGGAGTGGCGTCCGGGTGAGCGTCGGTCGAACG
CGTAGGCTGCGACGGCGGCGGCAACTCCAAGCGAGGTCGTGCATGGAGCGGCCGCCGACG
GTGAATCCAGGCGTGGGCAGGCTGACGGGGGCCAGTGGCGATAGAGCCTGGCGGGACGGG
GACTGGGGAGCAGCGACGGCGGATCCAGGCAAAAGGTATCCGGCAGAGGGCGCTGGAGCA
ACCGAACGGAGGAGGGCCGACGAGGTGGCCGGAGTGACCGGAGCTAGCGGCGTCTGTGGA
GGTGGAGCACGCGAGTTGCGGGCGTGGGGAGGAAGAACGTAAGCAACTGATACCATGTTA
GGAATGGGAAAATAACATTCACAGAGGGCTAAGGGCTAGTACATATACATGTGGTAAAAG
ACAAGAAACCCCTCATATAATGGGGATATACAGTAAAGGGACTATACACATGTTAACACC
TCCTTGTCCTTGATACCCTGTCACATGACTATGCTTCGGACCTTTGGAACAACTTGGTGC
CTTCGAAAGAGAGATATTTTACTTGGCTAGTGATGTGTGATCGCTGTTGGCTGGACCGCT
GATCGATTGGCGAAGAGAGGTACGCAGCACCCTGCTTGTTGCATACTCTGCGGTCAGGAT
GATGAAACAATGGATCATGTTTCAGTTCAGTGTTCTTTCGCGAGAAAATTTTGGTTCCTG
TTCTACGTCGATTCGGTTTGCAAAGGCTCAATCCGAGTCAGCTCGATACGGTCAGAGGAT
GGTGGTGCTCTCGGCCGATCCCCACTCTTCAAGTTTGCAAAAGAGAACCGGCGACGATCA
AGATTGTGGCCGTGGGTCTCCGAAGGTTATCACTGGAAAGAAATGCCTGTGTGTTTGAAG
GGAAGATCTCCAACATCCAGAGAGTGGTCACAGCAGGGGCGGACGAGCTCAAACTTTGGA
TCTAGGCACGACAGCAGACGGCAGGTGTACGGGAGGAGTAGGTATATATAGCTTTGCCGT
AGCAGTGGAGTTGGAGGTTGACATTTTTCACGTTCTGAACTGAACCTTTAGGATACAAGA
GTCTCTTCTTGTTTCCTCAGCAGCTCTCTGTAACCATTTCCCCTCTCGCCTAATGAAAAT
GACAGGCGACAAATTGTTGCTTGTTCTTGAGAAGAAAACATCTGGTCTGTACGGTTTTCC
AAGGTCACTCTCCGCTAAGACTGTGGGGAGTATTTCAATGTTTTTTTTCTCTCGACAGGA
ACTGACATGATAGTATCCTCGGCATTTTCACTTTACTGAAAGTTAACTCGTACATTCTTT
CTGAAGAAATTTGAGGGTTCGGTTAGAGATGCCCTAAATTGTGTGCACCAACCAATTCGA
CCAAAACACTCAATTTACTTGAGAAATAAAATATGGTTAACGCATTACAGTGGATAAGAT
CGGTGGGCAATTAGGAAACGGATCACATGATACCACCCATGCCATGCGTCTAATTAAACA
GGGTCAAGGCTTATCGTCTTACTACTTTATAATCTAAATTCCTCACTAATCCAACCACCC
ACGTAACAACTAGCTGGCAGGAATCAGAAACGAGAAAATTAAACTGGGGTCAAGTCTTTT
GTTTATTTTCTGGCAAGTCGTTCTTGCACCTTCTTCCTGCGACAGACCTGGTGTTGGATC
ACTACATTGCCAGTAGACCGAACACACTTTCAAACCGCAACTGAAAAGCTCGATCTGCTA
CTCTCCATCGCCCTTGCTACACCCCAGCTTTCTGATCATCCTCCAAAGTGATCCGGCTCA
TCGCTGCTCATCCCACCGGCTGGTCTCCTTCTAGTGTAAGTCAAACCAAGCTCACTATAT
CTTCTTCTTCTAGATCCATATACCTTGTATCCCTTGTATAAATGTGATATATTTGTTGTG
AAGAGGCGTTCTATTGGTCATGTATGCTTTTTAGTGGATCACACATCAATGGGAGGAGGA
GGACTTGTGGTGCGTGTGTGGAAAGAATGGGGAATTCAGATCTTGGTTGTCGCCAGCTTC
CTGCTTCAGCTCATCCTCCTCGTCTTCGGTGGGCTCCGGCGGCGCAGCTCCTCTGCCAGG
CTGCTGGCCTTCCTCTGGCTGTCATACCTGATGGCCGATAACATCGCGGTCTATGCCCTT
GGGCACATGTCCCTTGAGAGCAGGCCGGGAGATGACGGGCTCGTTGCGTTCTGGGCAACC
TTCTTTCTGCTCCACCTCGGCGGCCAGGACACCATCACTGCCTTCTCCCTAGAGGACAAC
CAGCTATGGAGGCGCCACCTCCTGACTCTCGTAGTGCAGGCATCGGGGGCCGGCTACGCC
ATCTACCGGTACACAATACCCGGTACCTGGACCTTGGTCTCGGCCACCATAGTGATGTTC
ATAGTGGGTTTCCTCAAGTACGGGGAGAGGGTGTGGGCTCTCCAAAGAGGCAACAATGGC
AATTTTGCTTTGTTGAAAGTTCACAGCAAAACCTCCCAAGATCGGCCTGAAATCTTGAAG
ACCACAGCTAAGATGGATAGAGAGGAGCTGATCTTATTCGAAGCTCATTACATGTTCCAA
TTTTGTATGTGTGCATTCATCAACGTCAGCCTGGAAAGATGGTCCAACGACACTGTTCGC
AGTTATCTACAGACCGGTCTGCCTCTGCCGTATAAACTCAACACGGACATGCTGTATGAC
CTGGTCGAGGCAGAGCTCTCCCTTCTGTACGACATGTTTTACACTAAGGCACAAGTGGCT
CACTCTTGGCAAGGCTACTTGATCCGTGCCATCTCACTGCTTGGCACGGTGAGCGCATTC
TTGTTGTTCCGTCTTGACGACGGTAAAGGTGCTCACAGGAGAGTAGATGTCTCCATCAGT
TACCTGCTATTGGTTGGGGCCATCATTCTGGAAACCATATCAGTATTTACAATTGTAGGA
TCAACATGGACGTGCAGCTACTTGCGCTGTCAGGGATGGAACCGAACTAATGCTATGGTT
TTGTGGATTCGACGACTTATCAAAGTGGGACGCCAAAGAAAATGGTTGCACTCCATCGGG
CAACATAGTGTGTTGGATTACTGCACCCGTGACCAAACCAAGTGCACAAAAATGATCGAA
GAGACAAGTACTGTACTTAAAAAGTGGCGGAGAAAGGTGAAGTTCTCAGTTTATACGAAG
ATCACGATGAAGTTCAAGGAACTAGTGTTGGGACAGATAGTGATAACAATGACTGATCAT
TCTAAGTCATGGAGTATCCTGGATGGACCCGGAAAATATGTGCTAACGAGATACGAACTC
TGGGGTGATATGGACTTTTCTGTCAAGGACAGGGATTTCGCCCATTGCATTCTCATCTGG
CAGGTTGCAACCGATATTTACCTTTGCTGTTGTGATGACAACCAGCATCAAAGTAGGTGC
CTCAATGCTGAAGAGGATGATAAACTCCTTGTTGAGGCAATAAAGGTATTATCTAAGTAC
ATGGGTTTTTTAGTGATACACCCAAGCTTACTGCCCGGCGGAGTTCCAAGCGATTCTACC
ATCAATGATTTGGAGGAGCTGTGGAAGAACAGAAAATGTTCTACTAACGGGGAGTTTGCA
AGGTCATTACTTGACCATAAAAGTGATGATCGGCCTTATATATCTCTTGCTTGTGAGCTG
CTTGGAAACAAAATGAATTTGTCGATGCTGCAAGTCATCTTCGAGGTGTGGGTGGAGTTC
CTGTGCTATGCAGCCTACCATGGCACCGGTATTTCCCACTGTATACAGCTTGGCAGGGGC
GGTGAGTTCCTCTCTGTTATCCGCCTCGTCATCGATCACATCGAGCTATTTCAGAAGCAT
AAGGAGAAAAGCTTCAACTCGTGATGACCACCTATATGTTGATTGATATGCCTCGGATGT
AATGCAGTATCTATGCTACCCAGTTCTATTGGAATAATGACTGTTTTTTTGTGAGCAAGG
AACACCATATGAGTTACTCTATCTATCTATAATCTGCTATTGATTTCTATGCCTCGAATG
TAATGTAATATCTATGCTGCCCATTTGTATTGGAACAATAACTCTGTTTTTGTGAGCATG
GAACAATAATATGAGCTTCTCTATCATCCTTGTTGGTGTTCTTTATTGTATTTCTTTCTT
TTTAGTTTTCTGAAAAACTTAAAAGTGCCCCGTTGATTACAGTCGTCAGTTGCTGTTTGT
GCTGTTGATAAGTACTACTCCCTCCGATCCATAATAATAGATAGTTCCTACCACTCCAAA
AATGAAGTAAAGAGCAGAGGCACAGTTGAATTTTCAGTAACACACATAATTCATCTATTT
AGTAAATTTATTTTTCATTTCAGATTGACATCACGGCAATTTCAACATATGCACCCACAC
ACAGCAGGAGATCTTTATCACCTTGTGATCAGTCTGGGCCTTTGCATCCATCACCAAACT
GCTCATCACCCGGGATTGCAGGATCAGGTCTCTCCTCCACTGCAGCTGATGAAGTTTCTG
GCTGCTGCAAAATGCAATGAAGCCATGAAAGAAAGTAAGTAAATTATTACTAGTTTCCAG
CAGCGGTGAGAAGTGAGAGCACCTACCTATAACAAAGCACACAAAAATCAAATACGCCAT
TTCGGTCTAAAATCAAGTGGATGAGTGATGTTCATGCGCCAATTTCAGTCTAACTCGTTA
TGAATAGATAATATCCAATCCCCTTAGCCTTAGCCATAGCATACAGAATCAAAATGGCGA
TAACAATATATGCCTAAATGAAATAGATTATGTACTAGTACTACTACCGAATTGTCTCTG
GCAAGAACATATCTTATAGGTTGGTGAACCACTGAAACATCACAAGTAGATCCCTAAGGC
AAATCTCCCAGGAGCACTAAAAATTCAAGAATTGAAGTGAATCAGCACCTTGCAGTGGCT
GTTGCTCGGCCGATTCTCCACGGACGACCCGTCAGCTGGCGCTCAGTGATCGATGTGTAC
GGCGGCGACCTTGCTCGAGGACGAACTTGCTCGATTCTCGAGGAAGACGGCGAGGCGAGG
ACGATATAGGTAGCCCACAACAAGGCCCTCGTCAGGCCCGTGATAGCAGATATACCGGGC
CGGGCTCCTTTGCCTGCCGTTTTCTCACTCCGTCTATGGGCGGGTTTGCATCGCCAATGT
GTCTCCCCTACCCATGGGCTCTCGACATGCTGTTTTTCTTTAAAAAAAAAACTGAACCAT
GCTATGATTCTCAAAAATAAAAAGAGCCGAACAATTTTTAGTAAGAAAAAAGGCTGAACC
TGGCTGCAGTTGTAAGAAAAGCTGAAGCATCTTTGTACGGGGTTCAATCTTATTCACCGT
CAATTATGACAGTACAACGAACACCGGAAACAACAAAAATTACATTCAGATTTATAGACT
GCCTAGCGACGATTAGAAGCACTGAAGCGAGACGAAGGTGCGCCGCCGTCAACATCCCTC
CCTAATCGGAGCTGGACAAAACTTGTTGTAGTAGACAATCAAAAAGTCATCGTGCTAAGG
CCACATGGGACCAGCGCACCAGAGTAGAAATCACCATCGATGAAGAGAAGCGTAGATAGG
AAAGATCCAATCTGAAGACACAAGAACATAGACGAATGAAGATCACATCTGAGCGGGTCC
ACTAAAGACAACCACCGATCGAATCATGTAAGATCCGTCGGAAACACACCTCCACAGACA
CTTCGATAATATAACACTAGTCGCACCGTCGAGACCCTTAGACCGAATCATGTAAGGAGA
ACCTTATTCCATCTCCAGGGATCCGTCGCCACCTCGTCTTTCTGGGCAGGACACAAATCC
TAAACGAACAGAAAAGATAACTAAAAACTAAGGAGGAGCTCTCTCGTCGGCAAGGATCGT
GATCCACTGCGTGCTCCATGGCCTAATGCCATAGGAGATGAGGTATATATGTGGCACCAT
CGAGGAGGCAAGAAACCCTAGTCTCACTAGCATAAGTTTCTCGCAAAATTAAACAAATCT
GTGAGAACCTTCCTTCATAAAAAAATAACATGAATATGATTATGGCTTCGGTTGTTACCC
CTTATACTCGAGAGCACGGGCATGATGGTTCTCATCGAAAGAAGGTCAAGTCCCGTATAC
ACACGCCCATTTTTCTCATCATCGGTCATCCTAACATAATTTCTAATTTTAATCAATTAT
GTGACAACATCATCCATATATATCCATACATATATCCATACAAATTGCAAACATAGGGAA
TATAAAAAACACATCCTCACACTTGCATATATTCATCCGTTCATTCATGATAATTGAGCG
GATACTTGCCTCAAACTGCCCACCTGGGCGACTCAAACCGTCCTCAAACATTCAGGTTGT
CCAACACCCCCTCGTATCTAGGCCAAATGTAGGACGGATATAAGACAACCCGAACGTATC
CGCCAAGTTAGCCCTACCCATCGCCAACCCCGATTCGTCCCCACAAAATACCCCAAATCA
AAAACCTTACGCTCACTTCGCTCTGCTCAAGCTCCGTCTCTTCTCCTCCCCTTCTCCGAT
TCGATCCATTCTAGTCATGGGCAAGCATGTTGAGCTCCTCCATCTGCTCCGACGACGATG
TTGTCGAAGAGCTGGCACTCCGCATTGCTCTCAAGGGGTCGCTGGTGGACATTGGGGGTA
GTTTCAAATCTTCTCTATCGTCGCTCGCCCGCCGGCACGTGCGAACACCTGAGCTAGATC
CTCCCGGTCGACGCAGAACTCCGCGAGGTCTGCTCAATTTGCTCCTCTGTCGTCCACCTC
CCCCATCGGCCACTGCTTCGCAAGGGGAACGGTGGGTTCTAGTGCCCGCTTTGCCGGCTC
CGCGAACGCGCATGTCAAAAGTGGAGGGGCGCGTGCCCCGCCATGAAAGGCATGGGGCAA
GGAAGAGGGAGGCGATGGAACAATCTGTTCCCTGCCGCCATGAGTTCCAGGAGATGCCTG
AGGAGGAGAAGCGGTTCTTCACTTGGGTCTACCGTCGATCACTTTTACAACGACAGAGAC
ACACGCGCGCTTGAGTACTGAGTTAGCCATATCCAGATAGCGTAATATATCGTACAAACA
TTTCCACATGTACCGTTTGATATGCCATCTCATTGATATCGACCTATATGTACATAACAC
ACTTATTTCTTCTTAAAAAACAAATAATGGAAATAAAATTGTACATTAAAACCTCCATAG
AAATACGAAAGTAATACATATTGTCAATTACGATGCATGTATAATGTACTTTCATGTGAA
TTTAATGACTGATATTCATTTCTAATCAAACAGAAAAAGGTATGCCTGAGTCATTTTTTG
TATGGAAGAATCGTATTTGCGTAAAAAGATGCAATTTATGAACAGTGTTACAAAAATGAT
TATTTATCCGACTAACCACAATGAAATTAACATAGGTAGTAACATAAGTGTCACCTAAGC
AAAAAGTATGATGTGACAACTAATAAATGAGAAGGAAGAAAATTGAGTAACTTAGCATGT
TACTACCTCTATCAGTAATATAGCGGATACCAAGGTAAGATGAGTCTATAGTCTAATAAA
TGATAAATTCAAAGTTATTATCCCTATGTTAATATCCACTGTGAAGGTAATAACTTAGAT
TAATAACATATACTCCCTCTGTCCCGAAATAACTGTCTCAAGCTTAATACAAATTTGTAC
TAAAGCTAGTACAAAGTTGAGACACTTATTTTAGAACGGAGGGAGTATATGTTATTACTC
TATGTTACTCCTCATTATGAATAGTCTCCGAATGAACAACATACCAAGTTACCAACCAAT
AGATCCGGTGTGGCAAAGCCAAACCGCTTATTGGCAGCGCTCGGTGATGTGATAGGTGCT
CAATATATTACATTTTCTCCTGAAAACAAATATATACATGTCACAGAAGATTCACACAGT
AAATATACCTTGTACTTTTTTTAAATAGTTCAATGAGATAAACAATACACCATGGCTGAG
TGAGAGTGACCGGCCGGTGGGTGCCACCAGTTTTTGGAACATTGGCAAGATGGAGGGCCC
ACGAGAGCGATGGCCACCATCGTCCATAGGGGCAGGCTATTCCACGTATGAGTCAATTTC
CCAATTTTAAGCTTTCGGAATATAAATAGCGGGTAGGCAACTGAGAAAATGGAATAACAC
GTAGTAGCAGGTAGGCAGGCAGCTGCATGCATGGTGGACAGCACGACGGGTGTCAAATAA
TTGCACGACCTCGCTCCATGCCTTGCCAATATTATATCACGATTTTTTTTTCTAACATGG
TACTCCCTCCGTTCCTAAATATAAGTTTTTATAGAGGTTTCACTAGTAAACTACATATGA
ATGTATATAGACATACTTTAGACTATAGATTCACTTACTTTGCTCGGTATGTAGACCTCT
AGTGAAATATTTTAAAAGACTTATATTTAGAAACGGAGGGAGTACAATCCAAATCGTTCA
TACACTTTTTTATGTGAATGCATACATGCATATTTTATTCTTATGAGCATTTTTTTATAG
ACTGAATCAATACATAATGTTAAGATTAATGAAATCGTTACATACGCCTTTTTAGTGGAC
GAAAATTCTGACGAGCATGTATACCACTATTTTTCCTAATCATCATACCACAGGTTGATT
TGCATTATGTAACGAATACTTGGTAAGCAAAAATGCTAGACGTACGAGGTCTTACAAGCT
TTTACAGGTTCCTTCCTAACTAATTAAACATGACCCCCTGATTTCAGGTGGGTGGGGCCC
CTCATTTCCATTAAACCAATCACGATTTGCCAGCTAAAACTCACCCCGTAAAACCCCGTA
ATAGTCCGTCGATTTAGCATTGTTGCTTGGTAAGTAATATCAATTCCAAGATGGAATCGC
CTTCAAGGAACAGAGTCAGAAATCTAGTAAGAGGGGCCAACAGAAGAGGTAAATGTTGGA
AGGGGCTAAATTTAGAGCATTTTAAGCTACAACGGTGTTTATTTTGTAGATAAAAAATGC
CATGGAGAGGTAAAGGAAACGGACATAATGTTTTACTCTCTTCATCTTTTCTTTGCTTTG
CGGGTATTCGCCTTCTTCTTTCATTTTGTGCCTGCTTCTCGGTAACTCAGTAGGAGGTCC
TCTCACAAGAAAAAGAAGAAATGTTAAAAGAAGAAGATTCACGACGGACAAGAGTGTGAC
TTTAAGGTTACATACAAGCTTTTAGGAAAAAACAAAACATATTAAGATATTGCTTTGGGG
AACATGTTTTATGTTCATTCATGTCGTTTGCGTTTGGCTCATGTCAATGGAAATTCACGC
AATTGTGAGCCAAATTTATCCTCTATTCTTTTCTTACACAGGTCTTAGGATTTGAGTTTT
TTCAACTCAAGTTTTGTAGACACCCCGTAGCAACTGGCTAGCTAGCACGATCGCGCTCTC
CTCTCCGGGCTGCAACTTTGGGTTACCCAAAAAGAAAACGAACTAAATGGACACGGCAAT
ATCATAATCACGGAGACTATACACATAGTGGGAGACACGATGGGACCCGAACGAACAACA
TTTTTTCCCCTTTTTATAAAGCATCACAAAGAAAATATCCACTTTCGATGAAGAAAAAAT
ATCCATTTTTCAAGAGGCTACAAAGAGCAACTAGGCAACCTTGGTTAACAACGACCCCGT
TGACACGAACCAACATGTGATTGAATGGTTAGGGAAACTGTGGTATCCTCAGTCCATGAT
GAGATGACTGCGGCGACTTCGTAAATTTTAAGATGATATACCGCCTTAGTCTTTCGGAGA
TGCTCATAATGATAGAGTATGCATGTGTGCGTCCATAGAGATGAATGTATGCTCGCGTAT
ATGAACATTTGCGTTTGTACTGTGTTAAAAAAAACGCTGACAGCTACTTGAGCCCTAATT
AACAATCACCACCAACACCAAATCAAAGCTTCCCATACAATATACATAGTGCGTGTAGCT
ATTAGGGTTCGAATTTGCATCTTCTTTTCTTTTTAGCTGGCGAGTGGAGTGGAGTGGCGC
CTCCCTCTAGATTTTCCGCCTATAAATACCACCCCTGGGCAAGCCTTGTGGAGAGAAATC
TACCACCTCTCTCCATCTCCCTCCCGGCCTGCACACACAAGCATCGAAGACTTCTCTGCC
TTCTTCCTCCGCCAGTCTTCTTTCTGCCATGAAACCCCCTCACTTCACCGGGGAGGCCGC
GGCCAGCGCCTCATGGGCTCACGAGGTCAAGCAGGCCCTCCGTGACAAGCTCCGGTGGAC
ACCCCCCGCGGGCACCACGGGTACCGGCGGCGGCGCCGCGAGG