morexGenes - Barley RNA-seq Database

Contig contig_46703
Source Contig contig_46703
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_46703 (7088 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_46703

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_62564	2	3807 bp	MLOC_62564.2	Available	Available	LOC_Os05g48800.2, FRAME:-3, EVALUE:1e-89, 13105.m05204 protein drought induced 19 protein, putative, expressed
CDS Structure of MLOC_62564

Contig Sequence (7088 bp)

>contig_46703 7088 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCAACAGCCTACCAGATCAGCGAGCGACCCAAATATTGCTCGTTGT
CCACCCGTCCTATGATCCTTCCCTGTATGGCGTCGGCCAATCACTATGTCTCCTTGTATA
GTTGCCATAGACCGTAAAGAAGCGGCTGAATCTTAGCAGATGATCTACCAATTCTTGCAT
GAGTCGACTTGGATGAATTGTAGATCTTGCATTGATTAAAGTGCTTTTTCCCAAGAAAGA
CCATGCATTTATTTAGACTAGCTCAAAATTGGATTATTTTAATTTGACAACTACATCCCC
CTGTTGCGAGAGGCACTTTGGTTTGCTATGATAGAGGTATAAATAATATTCATCAAGTCG
ACAAAACCATATTTCACCGATACGCCTCTTATTCTTCACGGTTTTTCAAAATTGTTTTCC
TTTTTCAAAAAAAAATTCTCAAGATTTAAAAAATTGTTCGCGCTTCCAAATTTATTCACA
ATTTTTCAAAAGTTGTTCTAAAATTCAAAAAATTGTTGTGCTTTCAAATTATTCGGGATT
TTTCAAAATTATTCTCCTTTTCAATAATTTGTTCTTAATATTCAAAAAATATTCGTGTTT
AAAAAAAATGTCCGCGCTTTCAAATTTATTCACGATTTTTCAAAATTATTCTGCAAATTC
GAAAAATGTTTTTTTGCTTTAAATAAAAAAGGAAAGAAAAAACGAACCAAAAAATAAACA
AAAAAGGAAAAAAATTAACAGGAAAAGAAAATCTGGGTCGCAATGAGTGACAGGTAGGAG
CTCCCGTCCCCCACCCCCTCCTTCGGGGGTGGGCTCCTGCGTACCTCAGTCTCCAATCGA
TACTCTGCACATCACTCGTTACGTTAGACCCGTAACTAAAATTACATAGGTGTAGCGTTA
CTTCTTACATTATATACGGTGTTCAAACAATGGAGACACGTTGTGGATTAATTGTCTCTT
GACATGTCAAGAACGAATTGCATTTGGGCTCGACGGGTGCGTCTCTGTCTCTCACGCATA
TGCACGCAAGCAAGCGCACAAATATATCTCCAACAGCACAAGTTAACGTCCGAAATGCGG
CAAAGCTTTCCAGGCCCGCGGCGAAGCACCGTGACCTGCTGCGCGCTCTTCTCCGGGTGC
CTGCTGCCGGAGTCTATATTGCTGTAAAAATTGGAAGCATACTACTGTAAACCGCAAGAA
CACCCACACTAGAAATAAGTAAACTGCATACCCTTCTGCTGTTGCATAGCAACACAACAT
TATTATGTAACTGGTACAACAAAAACAATGCTTGTAAGCAAAGAAGCAGCGGTATGGTAC
GGTACAGACACCACCGCGACCTGCGCAGATATCTATCTCGCCTGCGAGACCGCGTGCGAT
AACTGAGATGGAACTCAACACAAAGACCGGCTACAAATAACTTAGGACACCTCATGCCCA
CATCAACTCTGATCTGATGCACCTCCTTCCTTGCTGGGGTGCCCAAACCCTATCTTCCAT
GGATATCACATTTGGGGACTTGGTCTGGGGGCACCAACCTTTCGGAGTCTGCACCAGGGC
AGCGGTAACATCGGCTTGCCTCTGAGTTATTGGTCTCTGAATAGGGTGGAGAGCAGCAGG
TCTTGCACGAATGCCGCTCTCACGCTGGCTTGCTCCCTTTCTTCCCTTGTGAGGGACAAG
TCAATACTGCCAAAAGAAAATGACGCGGGTGACTCAATTATAAGGTTTCCCTCAAGATTT
ATAGGAAGTGGTTGCCCAGACATTCCACTCATTACTTCATTCATTAGTACTCCCTCCGTC
CCAAAATAACTGTCTTAAGCTTAGTATAATTTTGTATTAGAGCTAGTACAAAGTCAAGAC
AGTTATTTTGGGACGGAGGGAGTAAGAAAATACAAGGTTTGTAGCTAAATGATCTCTCTC
AAGTCAAACCAACGCTACTTGACGTTCTTACTTAGTGCAAGTCTGTCATCACTTATCATC
GACAGTAAGCATTCGTTTATCTAGAACTAATGAGTTCAGTTTTCATGGTCAACACAGATT
TTTTTTCCCTTCATCTGACTAAATTATGTAAAAGATGTTCTGCAACAAGTCAGATTTTCA
TGGTTAAAACAAATTTCTCATGATCTGAATAGATTAAGTAAAAGATGTACTGAAAATAAA
CATCGCCATGGTGCATTAGAGAACAGTTGGCATAAAGGCAGTTCCTCTGTCGACAGGTCA
CTAGATATATAAATAGGAGAGTAACAGGAAGAAGATGGTCAGTACGAAGTCTATAATATC
CACAGTATCAACAGATATTTACCTTGACCGCCACGGCCGAGCAGCTGCCTCTTTTAGCAC
TGGTACATCACTCTGAGCAGGAGTAGACAATTTTGATGTTTCCTCAGCATCTAATGTTGG
GAAGCTAAGGCCAAATGATGACAGAAGGGGATCAGCTGAAATATTTGCCGCATTATTGTT
GCTCGACCTATGCCCACCACCTCCCAGAAGCACCTGCAAATGGGCTTCACGTAGATCCCG
GCTCAGCAGAGAGAGCGACTGGCTGCCTGGAACAGCAAATCTGCGCAACCTGCGGCGATT
CTGCACATGGTCCAAAGTTAAAGAAACTCATATGAAAAGAGGGGAGGAGGGGATGAAGGA
GGGGATTTACCTTGAACAAGTACCCATGTTGCATGGTGATATGATTAAGCATATCTTTAG
AAACCTTTTCGGAACAGATAGGGCAAGGCTGAAATGAGGAGAGGTAAACCATATAAGAAT
ACATAGAAGCGAAAACATCAAGTTACAAAATTCCATATTATCTACTGTAGACACGCACAA
ATAGATAACAACAACAGGTCAATCAAAAAGAATTCCAAGCAACAGGTGAAACTAGTTGAT
GTCAAAAACAATGCTTAGTATATTTACTGGTTTTACCAACAGGATAAGTTGCACTCTCTT
CTATTTACTGATTTTACCTCACATATTCGTTCTTCTGCATTGTTCCTAATAGATAGAAAT
GGTCTATACGATGTGCATTGGCGGAGAGCTTTCGGCATGAAAAGTGACTGCACTGGGCAA
GAATGAAGAAGATCATGGTTCAATTTCCATTACTCTATGTTCCGTGATAGCCACTCCAGT
TTCGACTAAAAGGAGATGTTGACATATAAAATTGAGCATCTTCCGTGAAACTGATAACTG
CTATTTGCATTCAAACTAAATTGTTGCTCCTCATAATTCCTACTCCGAGTCATGGTTTAT
CAGCACATATTGCTAGTTTTATCAAGCAATCATGGCATGAGTTTATGGCAGCAAACAAAT
GCCAAAAGCTACACTTTTTTTCTGTCTCCAGATTTTATGATAAACCTTTTCTACTCCAAG
AACACTGATCAAGGCCAAAAATCCCATGCTTTGCACACCTAAAATCATTTGCCAGGTCAG
AAGCATTATGCAAACCAATATTTTAGCATACCAAGCCATATTTCTACATCGAATTCCCAA
GGGACAAGATAAAGAAAAGAAGAGGACTCGTTCTGTCGTCCAGGTCTCTGAACAAGAGAG
CTCATTCTTGTTCCACGCCAATAGAAGGTATACTACAGAAATTTTGCTAAGTTCCAAAAT
TCCATATCTACTTTAGACGCGCAGACAGCAATAACCAACAGGTCAATCTCTTCTCTTTCG
AAGGAATAGGTGAAATTAATTGAGCAAAAGAAGAACACTTGATCTATATGCAGTACACTT
AAAGCTGCATAGAACCAAATCCTCTTTCACTTGACTCTAACAAAACAGGGGATAAGTTGA
GTTCTCCTCAATTTATTGATGTTCCCAATATATGATTTTCTTCCTGAGTAAAAACCTCCC
TCTTCATTGTAACAATAATAATATGATTGCTCTTCTTTGTTGTTCCTAACAGATAGAATG
GTGTACACAACACAAAATGCATTGATGGAGAGTTGCCAACATGATGAGTGAATACACCGG
GCAGAGAAGAGATCATGCTTCGGTTCCCATCACTCTCCACGATAACTACTCTAGTTTTGA
CTAAAATGAGATGTTGACATGTGTAATTGAGCATCTTTCAAGAAACTGACAACGGCCCCT
TGCATTCAAATTAAAGAATTTCTCCTCATAATTACTGCTCCTAGTCAAGAGTTTATCAGG
CCAGTGTTTTCTTCTTGTCAAGAAATGATCTCATGAGTTACAGCAGTAGCAAATGCCAAA
AGCTCCACCTTTTTTATCTCCGGATTCATGATCAGCCGTTTCTACTGAACACGGCCAAAA
TTCCCTCCCCTTCTGCACATCTAAAATCATTTGCCAGACCAGAGCATTATGACCATGATA
TTGCAGCCAAGCAAGCCATATTTGTACTTCGAATCCCCAAGGTGACAAGAGTGAAACAAA
AGGAGGACTCGTTCGGTCGTCCAGGTCAACGCCCTTCAGAAAAAGAGCTCTTCTCATTCT
CCAGGCCACTCAAAGCAGTACGAACTCCACCTTCTCTGAATCTCTAATAATCCAAGCAAC
GAGGTACAAACCGATAAACAACAGGCCAATCTAAAAAAAATCCCAAGGAGCGGGTGAAAC
TAATTGAGGTAAAACACAATACTTGGTGTCCAACTTTAGACAGGCAGAAACCAATAAACA
ACATGCCAAACTAAAATCTTCTCCGAGCAACAGGCGAAACTAGTTGATGTCAAAAACAAT
ACTTGGTCTATTTACTGATTTTACCAACAGGGTAAGTTGTGTTTTCTTCAACTTATTGAT
TGTATCTCACATATGACTGCTCTTCTGCATTGTTTTGTTCCTAATAGATAGAATCATAGA
ATGGTCTATATGGCGTGCATTGATGCAGAGTTGCTGACATGAAAAGTGACTGCACTGGGC
AGGGAAGAAGATTATGGTTTGGTTCCCATCACTCTATGTTCCGTGATAGCCGCTCCAGTT
TTGACTAAAAAGAGATGCTGACAATCTTTCACTGTTCCTTGTGTCCAAACTAAATCATTG
CTCCTCATAATTCCTACTCATAGTCACGGTTTATCAGCCTATATTGTTGTTCTGTCAAGA
ATCTTGGCATGAGCTTTACGGGAACAAACAAATGCCAAAAAGCTACACTTGTTTTTGCTT
CCTCCAGGTTCCACGATCAAACTTTTCTACTCCAAGAACACTGACCAAGGCCAAAAAATC
CTGCCCTTGTGCGCATCTAGAACCATTTGCCAGGCCAGAGCAGTATGCAAACCATGATAT
GATATTCTAGCAAAGCAAACCATACTTTCTTCTTCCGATTCGCAAGAGACAAGGTATAAG
GCGAAGGGGGGGGAGGAAGAGGAGGACTTGTTGGGTCGTGCAGGTCAACGCCCCTCTGAA
CAAGGGGGGCTCGTTCTTGGTCCCATGGATCTTGTGTCTCTGAATAACAATCCAAGGAAG
AGGAGGGGGAGGAGGAGGAGGTTAATGGGGTACTGACCGCGGCGTGGGGCTCGAAGGGGT
GCTCCTCCTCGAGGTGGGCGATCAGGGAGGCGACGTCGTGGTCCTCGTAGCAGTAGGGGC
AGGCCAAGTCGGGCCTGCCGGCGTTCTCGTCGCCGTCCATGTCCAGCTCGTCCATCCCCG
CCCGATCTGCGCCCACGCAAGAACCGGCAAATCAATCAGCCAGCCAACCAATCAATCAAC
CACGGAACCCGGCGCAGAGCGAATCGATCCAATCGATGGATCCCGGGAGGGGGGGAGGGT
ACCGGCGTGGCCGAGCTGCGCTGCGTAGAACCGCTTGGCGGCGGCCAGGCGCGAGATCCA
GTGCTCCGAGTCCATGCCGGCGTAGATAGATAGATGGGTAGGTAGAATATAGGGCCGGCT
CTCGCACGCGCCGCTCCTCTCCCGACCCCGCGCGCGGATCAGCTGGTGGGAGACAGGGGA
GGGAGGAGGATGCGAGGCGAGGCGAGGAGGGAGCTTCTCTCGGTCGCTGTCCGCCTTATC
GCTGGTTGGGGAACGAGATGTGTAGGGGACGGACGGACGGACGGACGGACAGACGGGGGA
CGGGAGGGGAGGGGAGGGGAGGAGTGAGGGATGGAGGCACGGCGCCGCTTTTATTATTCG
CCACCGGGGCCGGACCGGGTCGCCGTCCCCCACCGCGTCATCGGATCGGATCGGATCGGC
GGCGGCGGCGTCGTCGTCGTTTACCTTACCGCCCGCGCAGCGCCGTTAAAAAATTGCTTT
TGGCGCGCGAGTTGGCATGCAACTCAGCGGCGACGCCCGCGGTCGGTCCACCGTTTGCGC
GGTGGTGGGCCACCCACGGAAGGAGCTCCGGTCGGGTCTGTCTCGTGCCATCGGCCGCGC
AGGCACAGAGCCGTAGCACGCGTGGCAGTGACGCCGCATGCCTGCAGACCAACGGTCGAG
GGGGGCCGCGGGAGGTCGGCGCGTGGCGGCGATCTGCGGCTCGTCGGCAGGGAAGGGGCG
GTGCGAAATACATTTTGGTTTGGTTGTACTCTTCCGCCTAGTTTACGAATCCGGCACATA
TTTTTTTGAACCGGGTTCCTCGCCTTTCCATTACTTTTATAATGAAAATACAATGTTTTT
TCGGGCCAGAACCAAAAAGAAGGAAAAGAAAAAAAAGCGAGCTCGTAACAATACCATGAA
ACCCACCGTCTACGCCTGTCATCAGGAACGATAGACTGTGGGGCGAAAACCTGGTATCAT
CATTCATCACGCAAAACAAAATCTAGCCTACCATCATACCAGTATCACAGGAGTATCTCC
AACCATCAAACTACAAACCAGGCTCAAAGAGCACAAACAACTAAGATACCAAACTACAAC
CACAGATAATAGAAACTTTCTTGCTGATAATTAACCTGCAGACATCCAGCAAATGCCACC
AGCTCACCCCAAAAACCAGCTTCATCAGTATTACCATTTCTCCCAGCCTCCGTCTTCATC
ATCTTGCTTAGTAGATTCTGACAGTGGCGGCCCGCACAGCAACAACATCTACGAAGCATT
CTCTTTCAGCATGTCAGCGCCTTTTTTGACCACCTCCCTCGTCACAGGTTTTTGCAAGCC
TGACCAATATTTAAGAAATGCACATGTTGTAAAGACAATCTTAAAGGGAGTATTGATCCA
TTTCTTCT