| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_46545
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62420 |
2 |
1723 bp |
None |
Available |
Available |
LOC_Os02g48964.1, FRAME:-2, EVALUE:5e-86, 13102.m05542 protein WD-40 repeat family protein, putative, expressed |
CDS Structure of MLOC_62420
Contig Sequence (7329 bp)
>contig_46545 7329 assembly3_WGSMorex_rbca.fasta
CAAGCCGTGTTAAAATAGAAGACCTGTCAAATTTTGAACTGCATTTTTGTAGGATAAGAC
CATCTTTATTTGTATCGTAACTATAAATTCTTAAATTATAGACATTTTTTATAAATTAAG
AGCGTGTGCCGTGTGNNNNNNNNNNNNNNNNNNNNNNCGCATGGGCCCTTTTGCTAGTTT
AACTGAATATGAGATGCACGAGCAACCAGGCAAGAGAATAGCTAACAGCACATCCGTACA
CATCCCCACCAGCAAAGAAGAGAGGCAAATGGAATCTTGTCATGTTTCCGTAAGAATAAT
GAAACCTCATCATATGTTACAAGCTAATACTAAGAGAGTGGGTTCAGATAACAAATAGCA
GATAGTGACAAATTTAAGGGAAACTATAAAGATAAATGCAGCGGACAATGTGTATCCACA
GAATGCAAGCCATCGGATCAGCAACAGGGGCATGCAGTCAAGCAGACCTTCAGATTGCAC
GAGGAGGTTCTGTCAGGTTCCTGCAGCTTTGCGAGAACTATGCACAAGGAGAAGCCAGTG
CCGAGGTCATGAAGCAAGTGAACAGGAGGAGAGGGTGTGGACACACTAAGGTGACAAAGG
TGCTACCGATGGCCAGTTGGCCACATGAAAGGTGGGCCGGTGCGGTAGGGAAATTGTATG
GTGGATGGGTGGGTGAGGCAGGAGAAACACAGGTGATGGCCACTGGTAGGGTACTGAGGA
GTGGACAGGGTAAGATCATTGCAGCAAGACGCAGCCACCCACAAGTTTGGGCTCTCCCAG
TCAATTGCGAGATAGAACTCCCAAAAAACTTTGGGGTGAGTGCAAAAACAAAGTGATACA
GTGATCTTACTTTGCATATTAGCTCTCCTTGGAAACCACCAGCTACTAGCAAATTATCCT
TGACTGCCAGCGTACTAACTTGAGTCTGAGAAAACCCTTCTAATAAACTTCCTGGATGTT
TCTGCAATGAGATAATAAAATGTCATTAATAGAGGTAGAATGGAAGTGCAACCTAGGATG
AAAATTAGTAACTGTAGACCTACCTCACTTGGTGCAATATGCCCTTCAACATTCATAATT
TCTGTTTTCACACCACTCAAGGCTGACCAGTGTAGCACCGAGTAATGCGATATTAGGTAG
GCATCATGCTTAGATGTGGCCCATACTAAATTTCTCAGCTGCAGGCATAGATTAATAATT
AGATTAATTTCTTATTTAACATCCATGTATCAGATGAAATATAAAGGAGCGTCAACTAAG
ACTGACAGCAAGCAGCCTCCATAATTAATTTAACCAACTGAAACAAAATTACAATCAGAA
TCATGGAACAGACAAGTCTTTGAACAGGTTAACCCATTATTTGAATAAATTTCCTCAGAT
TATATAATAAGCAGGGTGATTAATAGACTGATGTAATCAAGCCAAGAACCGAAAATTCCA
TCGGAGTTCTTGGTGGACTTTATTTTCACACAGTCGATCCATCTTGGCATAGAAAATACA
ATAATAGGCAAAATAATATATATTAATAATCAAAGATACTCCAGGCACCCCTTCAATTAA
TTAATTATAAACACATCTATCTGCAATAAGAGGCAGGCATGGTCATAAAGATGGCTATCA
GGTGCCACCGTGCCAGTAACAGGTAGCTGGTAGGACTGTTCCCCCTTCCCTGGCCACTGC
CATCTGTTAGAAGATAGTAAGCCCCTAAAGACCTATAAAATTGACCCGTTCTAGCTAACT
ACTAACAGAAATAGGTATCGTACAAAAGCAAATGTAGTGTTACGAGCTAAATTGGTAGAC
ACAAACATTGCACATACATCACAAGTGATCATAGTGAACCGAAGAGAAGTAGAGAGCATG
TTGGTTATGATTTAAAAAGTTTCTCGATGGCCTCTCCACAGCCATTTAAAAGGTAAATAG
ATAATTACAGAGGCAACTATAGGTTGAATTTCCGATCACTGGGCGCTTGTTGTGTAATGA
TGCAGTAGTTAGGTATAAATGTTAAATTGTTACAGCATAATTTCGTGTAATAAACTACGG
AAACGTTGCACCTGAACAAATGCACCATTTCATCTTTTGAAGAAATTTCTAGTGTCTGAT
AGTTAAAATGTTCAAATAAAATTTGTCTGGTAACCATCCTTATTGAAATGCAGGATTTAT
ATGTTACTTACTAAACAAGGATGTATAGGAACTCACCTGAAAGTGTAGAATAGTAGATTT
TACTGATCTAGTATTTTGCCTAAACTCATAATATGTTCCGTCTTTCTCAGTAGATTTGCA
TGCCTGTTTTACAGAAATGCCAATCACAATGTCAGAATATTTTCTCCCACAGAAATTAAC
TTATTTGAAAGGTATACCTTCATTGCTGTTTCTGCAGAATTAGGTACGTTCTCGTAGTTT
TTGTACTGTAATAATCTTGTCTCCCTGTATCCTTCTCTGGTAAGTTCCAAGCGATTCCAT
GGTATTCCTTGAATGTCTTTTCCACGCCTTGCTTCTTCAGATGATGTGTCGGATGCCTTA
TACTAAAGCAACAATTATTTCTTTTAGAGCATTCCAGTGAATATATAAGCAATGGGAATA
GTCAAACAAAGCTTTATTCAGTGATCCAGATACAAACTGAATCGTATGTACCTTAGCTCT
TGTGGCTCAAAACATAAATAAGAACTTAAAAGGTAAAACTACTGGATTGTTTTTCCTACC
TCATTGGACTGCACTCCTATGTATCATAACAATTTTATGAAAGCTCAGCAATCAAAGAGA
GAAAAGATAGGAAAAGGCAGTTTGAGAATTACACCCAAGTTATACAGGAAGGGGGCCACC
CAAAATGTATAGGGCAACTGAATGCAAAATGAGACTTCAAGGTTGTGTAAGCTTGTAGCT
ATCACTTGAAACTGTGGTGCCACACTAATTTCAAACTTAACATAGCAGTAAGTCAACAAT
TTCAACTGTCTAGTTATCCCTTCACTGCTTAATACGCCGGCACAAGTCAACAACCTGAGT
AAATTAGCTAAAGAATACTTAAAAGCCTACACAATCAAATTAACAAAAATCGACAGAAAG
ATACTTGGGCATCCTCGTCATCCTCGTCATCAGAGTCGTCCCTAGCCTCCGGCCCTAGGA
AATCTTCACCATCCATGTCATCCACCGGGTCGTCCATGTCGTAATCATCCTCCATGTCCT
CAACATTGTCCTCCTGATAGTGAGACATGTCTCGGGCCTGCAAGCGCGACAGCGGTAATC
AACAACACATGAAGCATAAACGGTGTACCATCACCGGAAACTTTCTAGAGCAGTTCCGCA
ATGGTACTATAATTCAACGCACCAATTTCACAACCCCGTGCTAAGATTCGGTTGCTGGAA
TGAAAAGAAAACGTTAGGGGGGAAATAGAATAGAATATACAGAGCAAGTTAGGTCTTCGT
TACCAAGAAGAGAAAATCCGCGGGGGTGGATCTCCACGCCAGGCCAATCGGGCAGAGGGG
GGCGGAAGGGGGAGAAGAATTCGACGTGGCGCGCTTTAGGCCTGGGGGCGCGACCGGCGG
CGCCGGGGAAGGGGTGACACGGCGGCGCCGGGTTTGGGAATTAGGCGTGCGAAAGCTCGA
GAAGGCGCCGATACCCGAGAGGAGAGGTCTGGCTGATACAGACAGAACTCCACGTTTTTA
TTTTTCCTTTTTGAAGGACGCTTTTGTTTTTATCATTTTTTTTATAACACACCCATTTTA
TAGATTATGACATAATGTCCATACAAATAGTTTTCCGGATGCATTCCGGAGACACACCAC
GTCAAACACGACACTCTAGCTGATTACATGATCGAGCCAACAGATGTGCAGCAACATTTT
GTTCCCGACGCACATGAAATATAGAACAACTAGTGACCGAAGCTCTAAGTTGCTTGATGT
CCTGAATCACAGGACCACAAATAGATCGACCCTGGCCCAGTGAATTGATACGTTGGACAA
CCGTCAAACAATCAGAACCAAGTAAGACCTCCTGAATACCTTCACACAATGCAAATTGCA
AGCCTCTCTGAATTGCAATGGCCTCCGCTAGCTCAGGAAGGATCACATCAGGAACACCAA
TACCACAACAAACAATGCAAGAACCTGAATGCTCTCGCATCACCACTCCTGCCCCCATGC
TCCTGTCATGTGTAAAAAGGGCAGCATCAGCGTTTATCATCACCTTACCTGCCGGCGGCG
GAACCCAGGATGCTGTTGTAGAGGGTTCACACCTATGGTTGGTTGTGGTAATGAACAAAT
GCTCCACTATCATGTCAACATAAGCTTTAATTTTCAGAGCAAGACTAGAAGGATGTTGAG
TAATATCTTCTTCTCGGAGTTTATTTCGAGCATCCCAAATATGCCAACACGTGACTGCAA
GAACTGTAGGAGCAAGATCATCACAACGAGCCAAAAAATCAAAGATCCATGTTTTGCAAT
TTGTGAATCCTTTCCGACAAAGATGCAAGTTGAAGTAATCTTTAACATCAGACCAAACCA
CTTGTGCATAAGGGCAAAATAGCAATGCATGTTCTACGTGCTCATCAACAAAACAATGGA
CACAAACCTTAGATGCAGGAATATGTCGCCGGTGTAGTTGCATTCCTATTGGCAAGCAAT
CATGAGCGAATCTCCATATAGTTATCAACATCTTCCCCGGCGCCTTGATCGCCCATATTT
TGTTCCACGATATATCATCACTTTGGAGATTAGAAGACATACCATGACCTGAATTGCTGT
GCGATGCGATCATCTTTGTCATCCTGGCCAAATGATAGGCAGACCGGACCGAGTATGTAC
CAGAACGGGTATGCGGCCACGATACAAAGTTAGTGTCCCCAAAACGACTGATGGGAAGTT
GTAGTACTTGATCCGCAATCGATTCCTCAAAGACTGATCGGACTAGTTGAATGTTCCAAG
TAAAGCCATCATCAGCAAAGAGCGAATTCACCCTCTGGCCAGCCGAGAGAGGAGACAACA
ACTGCAAACACTGAGGATTCACACCAAGGATCCAATGATCCTCCTGAATCTTAATGGTAG
CACCGTTACCCACACCCCCATCGGACTCCTCTATTGACAAGTTCCATGCCATGAAGTATA
CTCCGCCAAGTATAGGAAGCAGGCCGTGGACATTTAGCATCCCAGAAATCTGTATTTGGG
AAATAACGCCCCTTAAGAACACGAGCACTTAGGGAATTTGGTTCTGTGAGTAACCGCCAA
CATTGTTTGCCTAACATAGCTTGATTAAACATACTCATATATCTGAAACCAAGACCTCTC
ATAGCTTTTGGACATGTCAACCAGTCCCATGATCGCCAATGCATCTTTCTTTTACCATCA
GCAAAACCCCACCACTGATCAACAATGACTCTCCTCATTTGCTCGCAAGTACCAATAGGT
AGATGGAAACAACTCATAACGTATGTTGGAATCGCCCGAATCACAGATTTTAAAAGAATC
TCTATTCCTTTCCTAGACAAAGGTCGATCAGACATACCATTGATACGCTTCCACATCCGA
TCATACAAATATTTGGAAGTCGGAGTAGTTGATCGCCCCACTTCTGTTGGCATGCCAAGA
TAAGAATCTTGGAGTGACTCATTGAAAAAGCCAAGGATATGTTTAACCTCATTCTTGATC
ACCTCCGGGCAACCATTACCAAAGAAAATAGATGACTTTTCCAAATTAATCTTTTGTCCA
GAACCCTGACAATAGAGATAAAGGGTATGTTTCAAAGCTTCCACATTCCTCCTGTCACTT
CTTGCAAAGAAAATGCTGTCATCTGCAAACAGTAAATGGGAAATAGTAGGACCAAGTCGA
CCATTTTTAATGCCATGTAGCACACCTTGGTCCTCCTGCTGTTTGAGCAAACATAACAGT
CCTTCAGTACAAAGAAGAAAGAGATAGGGGCTGATTGGATCACCTTGACGAATACCCCGG
GTTGGCACCACAGGCTCTGTGAGATCTCCGTTGACCCGGACAACATAACGAGTAGAAGTA
ACACACTTCATCACCGAGTGTATCCAAGAATCAGCAAAAGCCAAACGAGAGAGGCAGCCA
CGAAGAAAATTCCACTCAACACGGTCATATGCTTTCATCATATCAATCTTGAGAGCAAAG
TAAGGCTTCTTCACTCTTTGAGATCTTATCGTATGTAAACTTTCAAAAGCAATAAGAGCA
TTATCCGTGATAAGACGACCAGGAATGAAAGTACTTTGATTCTCAGAAATCACCTTTGAC
AGAAAAACTTTAAGTCGGTTTGAGAGTACCTTCGAGGCGAGTTTATAAAGGACATTACAC
AGACTAATTGGCCGAAAGTTCTTGAGATGTTGTGGGTTATTAATCTTTGGAATGAGCACA
ATCACTGAATCACAAAAACCAGTGGGGATGGTTCCTCCAGTCAAGAAACTTCGGACATCG
CTACAAATTTCCATCTGCAGGAAATTCCAATGTGTTTGAGAAAAAAGAGTCGGGAAACCA
TCTGGTCCAGGTGGCTTCGTGGAGCACATTTGAAACAAAGCAGTTTTTATTTCGTCATCT
GTATACTCTTTACAAAGAGCGTCATTCATCTCATTAGTGATCTTGCGAAGAATAGCATCA
AGGACAGAAGCAGCCAATGGACATGGTTCCGAACTGAATAATTGAGCATAAAAATTATGG
ACCATACCTTTGATTTCGGACATATTATCACACATAGATCCATCATCACGTGAAAGGCTA
GTAATTCTATTAGTGCGCCTCCTCGCCGAAGCCCGTGCATGAAAGAACGCAGTGTTCCTG
TCGCCCTCATGAAGCCAGTCTATCCTTGAACGTTGACATGCCATTACCTCTTCCCTCTCG
AAAAGTTCACATAGGGATTGTTCTATCATTCGTATCTCATTAATATTAGCCTGCGTTGAC
CCCCATAGCACCTTCAACTTCCGCTGTAATTTGAGAATTCCTTTATGAACAGAACCAAAA
GAATCATGACTCCACCTCTTAAGAGAACCGGAGAGACGCCGTAGTTTATCACATCTGGAC
TACAGAGACATAGAGCTGTCCTGCCCTTCTACCCAAGCCTTTTCCATTACTTCCCGATAA
TTTGGTGCTCTGATACGTCCATTTTGCATNNNNNNNNNNNNNNNATATTTATCGCTTCTT
TGGCCGTTATTTCACTTCACGGTACTATTNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGT
TTACATGCAGAGGGAGAATACCGGCAACTGGAATTCTGGCCTGGTACTGGGCCAAAGTTG
AAATACCTATTCTGCGCAACTCCAAATGCCGTGAAAATTCCTAATTTATCATAAGTGGGA
TGCTTGTCC
