| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_46506
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62378 |
1 |
896 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_62378
Contig Sequence (7892 bp)
>contig_46506 7892 assembly3_WGSMorex_rbca.fasta
CGGATGGGCGCCTCGTGGTCCCGCGCGGGGGGGGGGGGGCCCGGGGCGCGGCCGCGGCGG
CGGGGGCGAAGGCGAGCCGGGCCGTCGCCGGCGCCGGCGGAGGGGGGACCTCCTCGACCT
CGTCGTCCTCCTCCTCGCTGGAGTCCCGCTCGAAGTCGCGGAAGTCGGCCTCGAAGTCCT
CCTCGTCCGCCTTTTTCCGCAGGCCCGTCCAGAGCGAGTCTGCCGTCACGCTGCGCTGCT
GCTGCTTCTTCTTGGCCGTCGCCGCTGCCTTGGCCGCCGCCGCGGCCGCCGACGGCGGGA
TGAATCCCGCGAGGATGGCTCCGCCGCACATGGCGAGCTGTGGATCAAGGGAGGGAGGGC
TAGATCGGTGCCTGCCGGGAGAGGCGAGCACGGGCGGCACAGTGATGGAGGAGGCGAGCT
TTGCGGGCGGAGTGGGGGATGGAGGGTGGTGGCGATGCTACTAGCTGGCGGGCGGTGCTC
CCTACTTATAATAGCGGTGTCCGCTGACGCGCTACCCGACGGCGACAATCGAAGCGCCTG
GGCGCTCCTACCACCCTTTTCACCCCGGGTTAATTTTGATTATTACCGCGTCTCTTTCGC
GCCTAAAGTAGAGCAAAGTGAGCCGTGTGCACGTACTAGTGCTACTGCTGCTGCCAGAGC
GTGAGGGAGTTCGTTGCGGTGGTACGATTTCTTGCAGTAGTAGTGATACTACCACTACAC
TGCTACTGCTAGTACCGCATGGCTCACGCGGGTGGGTGCTGGTGGTGACACGGCAAGGTA
TGCCCGAACGATGGATGGATGCTGTAGATGGCTGTGTATGTATACGTGACGCCGCCAGAA
CCTCGTAGGGTTCCCGGGCACCAAGCGTGCGTATCTTGTAGACCTCGTGTGTACTACTAC
GTGGGAGGTTTGGCTGGTGATGTGTGTAAAGTCGTACGTAAATGCGATCAGAAGATGTGG
CTGGATGGAAGTAGGGCTGGCCAAAGCTGCTTTTTGGAGCCAACCGACCATGTGATCCGT
CCATCCATCTACCGGTCCGGTCGAGCGAGCGCGAGCAGGCTTGGGTTGGGTTGGGTGCGT
GCGTGCGTGCGTGCGTGTGCCGGACGCGATGCGCCGCCTTGCGCCTCGCGTGGCGCGTCC
GTCCGTTCGTCCGTCCCGTGGCGCGCGCGCGTCGATGGCGTCACGCCATGTTTCGTGGTT
TTTTTTTACCTGCAACTGTGTCGAGGAGATGAGCCGGAAAGCGGCTTACGTTACGAGTTT
TATTTTGGCGCGATGAGAAACGCGCGGGAGCGTGACAACGAGGAACGGCGTCTCTGTAGC
CTGCCTAGCGCTGCAACCGGTGGGTGGGCTGGAGGCTGGTTTTGCGGTAAGCACACAGTA
CTGCCGCTGCGCTACGCTTTGCTCCGGCTGTCCGGCCGTTCTGACGCATTTAAACCGGCG
CTCCGGCCGCCCTGCGCGTGTGTGTGTCCGACTGTGGACATGTCGGCTATGTTTGTACTA
TACGTGTGGCCCAGGTTTTTCTCGTTTTTTTCTCTCTCTCTTTTACCTGTACACAACTGG
GAGTATGTATTGTGCACTACGTGACAAACCAGCCGTGAAACGTAATAAGTAGGAGCACGG
TGTGTTTTGTTTTGTTGTGACACTATTCTGGTTATTTTAACACAACATGCAATTATATCA
TGATGTGTACATTCATCCCTACGAATGCACACAACATGCAATTACATGCAATTATGTGTG
ATACGTATACGTCCGTGCGTGTGAGAGATTGTTTTTTCTATTGGTACTAGATATACCATG
TGCGTTGCTGCGGAAACATCTTAGCTTGCAAAGGTGAAAGTTAAATTCAACAAAATTATG
AGGGTTTAAATATTCAATACTTGTAATAGCCCAAAATAAATAGCAGGAAAGAAGTATATT
TTTACGAGGAAGAAACATAGTCGGTATAAGAAAATGAAAAGGAACAACCGAGGAGAAATC
CTGACCATGTAATCTCGGTCAGAGGAGGCCGGAATTTCACAGATTTATTCTTATGTATAG
TGATTAGGTTTGTAGCTATTGTGGTATGATATGCATGCATCTCTTAGGTAGTGTCCATTG
ACAACGTACCTAGGGTAATCAGCAAAGAATTAATCATGCATACGTGCGCATGCTAGTACC
AGCAACAATGTACCACACGAGAAACAGAGTAGTGGCATGCACACACACGCACCGCTCTCG
CTCGTGATGCAACCGGAGGACTGTAAATTCATCCGCAAAAAACTTATATGTATAGTTTTG
GAGACAGTATACAGTTTAATCAGTAAACTAGTCAAACCTCGACGTAACAAACGCATCGTC
ACGGAACTGGTCGGAATCTACTTGAAACTCACCGGAATCCGTCGCCGCATGTCGGAAGAA
GCCGCCGCATATGCCGGAATTTGTCGTCGATGCTCCGAATTGCGGCCAGCTCGACCTCCA
CTGCCGAGACGAGGCCGTCCACAGGCGGGATGGAGCAGGTCACCGACGGCCTGAATCAGG
GTGGTGCGGCACCGAAGAAGAGCGGGGCAGGGCAGGGGAGCTCGTGCGACCACAACGTGG
AACGTACACGCGACGGCGGGCAGTGTCGGGCTCAATCGGGAACGGGCAGTGCCGAGCTCA
ATCGGAAGCAGGGCTCCTCCACTGCATGCATGGCCGGAAACGGACGGCGCCGGGACGAGG
CAGAGGCAAGGCGAGCGGCGTCGGGGCGAGCCGGGGCACCAGGGCGAGGCACACCGTGGC
CGGAGACGGCTCGCTAGAACAGGAGGAAAAAAGAAAAAAAAATAAACTATAGTGAAATAC
AGTTCCATTTATCGGGTGTGTTTTGTCCGGGACAATTTTGCACCGTAAAAACGGTTTACA
ATGCCCATATATGCGTTTTTAAGGGTCACTTTTATGGGGTCTGTTAGAGATGCCTCTAAC
AACATCTACAACCGGACCCCTTATTTTCTCTTCAAACGTCATTCCTTCAAACATATAGAT
ATATTTATATATACATAAATAAATCTTAATTTGCACGCCGGTTGTTCGACCATGAATAGT
GTTTCCTTTTCCCGCTATCCGAAAGGCCGCGACTGATCAAGACCTATAACCCTTTATTCA
AGAGCGGTTCGGGACCGTTTTTACTAACACGTTTCATCACGGGGATCGTGTCCCTCTTTT
TTAGGTATATGATTTATGATTTGGATTATCCCACGCGTCCATAACCGTACGATTTTATCA
GAAAATGGCGAAGTTCAAGGCAGAGTGGCAGAGCTTTTGGTATTTTAGCGAGACATAAAA
GGTAGAACTCCCACTATAGCCCCCTCACGCATTCTACATCTCGCACCGTCGTTGCTATTC
CCTTCTACCAGAGCTCCAGCGCTCAAGCCCTCCTACCCCTCTCGTTCCCTCGAATCCTTC
CCTCAATCCGGCGATGGCCAGCTCAGCCTCAAAGGACAAGTGGGAGGCCTCCTACGTCAC
CGAGAAAGACATCCTAGACCTGAAGAGCTCCGGCTACTTGCCAGAGAACATAGCCCACCC
TGCTCCGGAGAAGGGCCAAATTATCCCCATGCCGAAGGATGAGGGGAGAGTAGTCTTCAT
CCCTCATTTTCTTCGGTGCTTGTGTTTTCCCCTTCACCTCTTTGTTCGGGGAATTATGGT
CTACTACGAGCTTGACTTCCATGATCTTCCCTCTAACTCATTACACACCTCTCAGCTTTC
ATCATAGTCTATGAAGAACTTTTACGGGTCCATACCCACTTCGGCCTATGGCTGAAAATT
CTCAAAGTCAAGCCCAAAGTTGTCAACTGCGATCGGGCTGACTGCAGGGAAGCGATGATC
AACAAGCTTGCTGGGGTCAAGTGGCCAAAGGGCACATTCATATACAATGTGCAAAGCATG
GCAGAAAGAGTGTCTCAATATCATCGAGCCGCGTAGCGCGGGAGAGACAGCTCCTGCAGC
ATTCAGATCTGGCCCTCCCACCCGTCTTGTGTCGTGGACGGAAAAGGCCCTCTATTGGGG
GGAGGCCGTGGAGGAGAAGGAGCTCACAAAGGTCTTCATTTTAATGGAGAAGAAAATCAA
ACGCAACGTGATCCAAGTGATGCTACGTCGCCGCCTTCTCCCATGCCAACATCAGTCCAT
CCCGATGTGGGATCATAATCTGGAGGATCCGGACAGTTCGGAACTTTTTTCGCATTACCC
TTGAGAAATTATGGAAGGCACTTTTCAAGTCGTAGAAGGCTTGGCGAGCCGAAGAGGAAG
ACGTAGGCATTCCCGTCCTTAACCCTCCCGGGCCGGTAAGGTTTTTATCACATCCTCACT
TTTCATCCCTCCTTTTAACGAGGTACTCACTTCTTTTTTCCCCTGTATTTGCAGGTCTCA
CCGGAAAATTCCCAACGGACCAACTGTCTGACGCCTTTGCCCGAGGGCAACATGACGCTA
CTACGCAACCATATTGATCGAGAAGCTGTACACGGCTTCGAGGGAAAAGGAGGAGCAGAA
GAAAGGGAAGAAAAAGGTCTGAGAGGGTCTTCGATCCAAGGGTCCAACAGACACGAGGTC
TGAGGATACGCTGACTCTCTCCAATCTGGAGGGAGAGGAAGAAGATGATGAGAAGGAGGT
GAGCTACTCCTCCCATACGAGGAAGAGAACAACGTCTGAAGACGTCGAGGGAGATTTAGT
TCCTGTTGCTCCGAAGAAGCAACGCAGGACCTCCACGACCCTACTTGAAAATGTTCCCAA
CTCAGACGAGGAGTCCCAGGATGATGCACCGGTCCACCAAAGGACCCTTAGGGTGAAACC
CCAAGCACGAAGGTACTTATCAAAAATCCGAACACTCCACTCTTTTAAATGTCGTAGTTT
TAACGACTAGGCATGTTTTCCGTATTATAGCCCGCAACGCGATTTCCCCACCGATCAGAT
TTCACACGGGCATTCTTTGCCACCTAATCTAGGTGAAAGCGGGACTGGCTCGGCCCACAC
ACCTCCCCACGCCACTGACGAGATCGGGGAGGTGGTATCTCGAGAACTCCCGCTGAGCCG
GAAACCAAGGCCGAGGGTGACAATATCATTGCCGAGGTTGACACCTTGTCTCCAAAGGAC
CAGGATGATGAAGCCCTCATGGAAAGGAAGGAAGGAGGGTCGAGACATTTTAGGTCTGCT
CCAAAGACAACTTTGGAGGACCCTCCATCCCTGGCACCGTCAGTAGCAGTTTCTCCATGA
AGGGTGACCGCTATGCTGCTCCCGGAGCCGTCCACAACGGAGTAACTGTGAACTGGATGG
CCGGCCATGAGGGAGGAGGGTCTCAATGACTCTTGCGTTCCTAAAGAGTGTCGTACTCAT
CTCAGTGTGGTATTGAAAAGCATCCAGTATGTTGATAGTGGTTTGAAAGAGGCTTTCGAT
GTGCTACTCACACATATCAAAGTAATCTGCACACTCTTTTTCCTTCACAAATTAATTCTA
TTTTTTGTATTATCTATAAGAAATCTTATGCTTAGTAGCCCCCGAGCCTTGTGCGAGTTA
GGAAAAACTCACGCCAGAATAGTTCAGAAAAAGTTGCATGTACCCCCAAGACTTTGGTAG
GATGATAAAAAAACACTAGCACATGATTTCAAAGCTTATTTGTAGGCTTCCACCTTGGTA
CAGCCCCCAACTCCATGGAGTTGGCGGAAATGAACTGGAAGCTAAAGTTTCCGAGGAAGA
GCTCGACCGCATCAACAAGCGGTTTGAGGACGCACAAGGTAAGCGTTCAAACCTTAGTTT
TCTCATAAAAGTGAGGTGTTTAATATTTTTGTCTCTAAGTGCGATTTATTTGTGTGACCA
TCATTGTTGTTGCTGCTGACGTCGAGCGGCTCAAAGCCAAACTGGACAAGGACAAGCAGG
AGGCTGCCGAACAAAGAGAGGTGGCCGGGCATGCCAAGTCTCCCAGTGAGAGGTCCGAGG
CCAGGGTTAATGAGGTCCAGCAAGAGCTCAAGGAAGCCATCATGAAAAATGAGGCACTTG
AGCAGAAGAATAAGGAAAAATCTTCCAAGCCGACCTTGGTAATTGTCGCACTCCAAGAAG
CGCGGAAGGAGGCACGCAGTCATCGGAAGGAGATCCATCAGATCAAGCAAATTGTAGATG
GTAAGAGATATTTACTACTGTGTATATTCGACGGACAAAGATTTGCATTGATTACTCAAG
TGTGGAGTTCTCGAGGTGCGATTGTACATCTCTCGAAGAGTGCGGGGGATGCTGTGAATC
ACTATGCATCCTAGGAGGGTGAGGCCGAGCAAAGGCTCTTCTCGGCACAATTTCAAGCCC
GCGAGCAACCCCTTCTTGTCTCCGATCAGTTGAAACAACTAATGGAGCTGCACAAGATGG
CAGAGACGATGATGAAGGATCTTTGCATCAGGCTTTTGCCGATAGAGCCGCTGCCCAGCA
ACTATTTTGGCCTAGTGCAAAAACTGATTACTATTGCACCCCATATTGATATCATGAAGC
TCTCTGTCTGCATCGAGGGAGCTCAGATGTCATTTGCAAGAACGATGATGCATTGGCCAA
AAGTGGAGCCCGTCAAGATGGCCACCGCACCTCCACCACCTAGAAAGGAGCATAGACGCC
TAGAGGTGTACGTCTCCACTTCAATGGAAGGTGCTCGGGTTGTAGAAGCGCAGTTCTCAA
TAGATTTAATCTTTGAATGAAAACTTTATCCTATAAAAGAGGGTGTATGATACAATGCCA
TTTTAATGTTGCATGGTATACCATGTGTTTTTAATTACAATTCATGTGTGGTTGTTTTAA
TATTGAAAGTTTCGTGTCGTCGGCTCCAGCCGAGTGACAAATACTATCAGGGGTGTTTTG
GGCTTCCGCGTTATTACCCTTAGCCAATGTATTTGTGCCCTAAGGCGGTAATGCGGGAGA
AAACTAGGCAATGGGACTCTGCAGCTTTAAGTCTTTCACTTAGCCATAGGAGCTTGACTG
TGGGGGCCAATTGGAGCCCCCTTGTAAAGCATGATATTCGGCTATATCGTGGTGTAAAAA
CCTATTATCAGTTGGTTTGAGAGGTTTCAAACCTTTCTCATAATGCGATGAACCCCCAAC
AGTTCTTTAGTTTAATATTTGTCTTTGGACCGCATGCTAGTTCTCGCTTATGGTGACAGT
CAGTTTTTGGCTTTCTCCACTGAGGTACTTAACCAGACTAGCCGAAACTACAATCGGATT
GGTTCTCCCTTTACCATTTTAGCCGAACGGACCGAACATACAGGGGTAAGCACACAAGCG
GGGCAACCTAACTTTAGACCCAAGACATGATTCGAAACCGATGCATATAACGCGAATCCA
AGACTCCACACACGCAAATGCTAAATAGTATTGTAATGGTTCTAAGGGCGCTCATGGCGG
CCAATCCCCCCGTCCATTTAGCCAGTATCCAACATGGCATAAAAAATAAGCTTGTGTAGA
TATGTACCCACGCGTAAGTGCAACACATCAAAAGTATAGTCATCATGATGAAATGAAACA
AACACTTAGCACGAGTAGTGTGATGAGGATAAGCAGGTGAAGAACAAGTGATGTGAAGAA
TTTAAGATGAGGAAATTGAGAAAGTATTTATTCAAATTCTTCAAATAGTAACGATCAATT
TCATCAACACGTGAATGAGGAAATAGAACTAGGTACTTGGTGGAGATAATGATTTGATGA
CCGAGTTCTAACTGTTGTGACAGTCGTACGTATGGTCTGGAGTGCTTGGTATTTAAACCA
AAGGACACACAATCAAAGGATACTAAGTCCTTACTGTATTCTCCTTGAGNNNNNNNNNNN
NNNNNCTAGCCCAACACTCGTGGTAAGTCTTTAGGGCACACTTCCAAACCCTCACAAACT
CGGTCACCAGCAATCCACAATTTACTGCTGGA
