Contig Data
morexGenes
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Map Locations of contig_46465 (5713 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46465

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62343 1 1460 bp MLOC_62343.1 Available Available LOC_Os02g42660.1, FRAME:+2, EVALUE:0.0, 13102.m04732 protein sphingolipid delta desaturase, putative, expressed





CDS Structure of MLOC_62343






Contig Sequence (5713 bp)

>contig_46465 5713 assembly3_WGSMorex_rbca.fasta
GACTACGATATATCCCCTACACTTGTTGGTCATCAAGACTCTTTTCTAGCGCTCTTGTCG
GGGAGTGAAGCGCATTTGGTNNNNNNNNNTTGGTAAGGAAAAATTTATATACTGTCCTGA
AATTTACTGTCACTTGTCACTATGGAAAATAATCCTTGAGGGGCTTGTGGTATCTTCACC
CCGACCGGAGCACAAAGAGATGCTACATATAAGCAACTTGATTGCACTATGTGTACCAAT
GAATTTTGCTAACATTATCATAGCTTGTGTACCATGGTTGCTCAGTTGCCTACCGTGGAT
GTTCACTTGCCTATCATTGATGCCCGGTTGCCTACAATACTATGAAGTTGGCCTATCACT
GATGCCTAGTTACCTGTTATTGGCAATTATTTACTTACCATTACTGCTCAGTTGTCTAAC
TTTGCAAATTAGTTGCCTACAATGTTATGAAGTTTCTTATCAAATTTGCCCAAAAATACT
ATGGCTTTGCATATCAATGGTGCTCAATTGACGGTTATTACTATTTCAGTTGCCTACAAA
TACATTAAAAAGTTGTCCATAATTGTTGCTAAGTTGCCTATATATGAAAATAAGTTCCTT
ACCACACCAAATAAGTATTGTATGCAACTTCGAATAATGTTAGGCTACTCACTAGTCATG
GCACGCAACTTAGGATAACGTTAAGCTACCTCGAAAAGTAAGTTTCCTATAGCAATATCA
ACTTAGAGATGATGCTAGTTATGGTAGAATACTTGCTGGTTGTGGTAGAAAACTTTGACA
TTGTATGCACTCGAGTGGCACACAAAAGAGGTGAACAACTTTTGGGGTGTATTTGTACAA
CTCTAGCGCACTCATCAAACAACTCATGTGTACTCTCACTTGGTATATAGAAAAATGTGG
AAAAGTCTAAGTTCCTCATTGATAGGCTATTGGAGGCAAAACAAGAAAAATAACTTCAAA
ATCATTATGACTTGAGTATCGTACAAAACTAGTTAGCAACTTTTAGGGTGTTTTTGTGCA
ACTCTAGTGCATTAAACAAGCAACTCGTGTGTGTTTTCCATCATTATATCTAGAGATTTC
AATGATTTTTGCGGGCAACTTGTGCAAAAATTACGAACTACTTTTGTAGATTTACGGGCA
AAACTGCGTGATCCGCCCCTATGAAACTTCTCATCACCCCTAGGTAACTTCTCATTTGTC
CCCATTTATGCAACTAGTCAACACCCGTGACTTGGCTAGCCATACCCGCACGTTGAATAG
CGTAGGCGGGCAGACTTTCCCAGAAAAGGAAAGAACAAACCTCTCATACCATGTATCCTT
ATATAGTTTCAAAAGAAATTATGATAGACAACTTAGATCCAACAAAAAAAATTTGGCAGG
CGACTAAGGTCCCTTGATGGACAACTTTTGTAGTATTTAAGGCAATTGGGGATCACACGT
TAGTAGCAATATAGGCAACTAGGTTTCATAGGCAGACGACTTAGAAGCCATGTTACGCAA
CTTTCCACTCTATGGTAAACAACTTTCACAGTATCATAGACAACTAAACTATCTACATCT
TAGTTTTTGATTTATGCAACTTAACAACCATGGTAACCATTTATTATACTAGCACACACA
AGTATTAGTAGGATAGTAGGTGAAATCATTAATACATTCATCTAGCATCAAAGTTGCTCC
TATTCAACACTGAAGTTGCTTCATCTAGCATCAAAGTTTCTTTTAAAAAACCTTTAAAAT
ATATTCATATGGGATCCTCTTTTGAAGATTTCGTCAGGAGGAACCCAACGGTGAAAACAG
GTCATAATTTCGACACGCGGTTTGAAAGTTATATCTTTAAAAAAAAGTGTACCAAAGTTA
ATGCATGTTACGTCATCATTGGGTTCACATGATTGATCCCACGAATTGAAGAAATATCAA
TGTGTTGTAGTAGGGGAATCTTTTCATATATAGAACGGATGGATGGACAGTTTCTAAAAC
TGGATAAAACCGTGCGAACAGTGGGCGAGTTGATGGCTACAGCACATGCACCCAACTCAA
AAAAATCACAGCTGCACTTTTAAGTATTTGAGAGAAATAGCACCTGAGAAATAAAAATCG
GACACGTGTGGGAGGGCGTTCGGTGGGAGTGTGGGTATCGATGGGAAGGGGAGGGGAGTC
CTAACGAAACGTCCTAGGAGTAGAGATAAGATGCATGCTGGATTTCAAAAAATAAGTCTG
AAAGGGCCACTTGTCAATGAAAAAATTTGAAGCTCTATAGGCAATCGTGCTTGTTTATAC
CAAGGAAAAAACAACACGCTATTCAAAATAATGCCATCCCTGAAAATATGTTATTAGCAT
GATATTAGCGGCATAATGTGTATCAATTAGTTTAGCGAGGCAATTTTTCCTACGCTATAG
CATGCTGCTATTTTTCGAAGTGGCTTATACTCAAAATCATATAAAAAGAAGGTAATTGGG
CCTGTATCAACCGCGAGAGAGAGAGCTGAGGTTGGAGTTTCACTTTGGAGTTATCGACGT
GTCTATAGCGCTCAAAAGAAGAAGAAAAACATGCGGGGCCCCATGTGGCCATGTGAAACA
AACGCACTATTTCATCTCCGATACAGATATCGCGGTCCAGGGCACAGCACACGTCCATCT
CCCATCCCATGCCCGCACCTCCACCTGAACTGGACTCCCTGAAATAGCTCCCGCCGCGGC
CAGGCCAACCCCATAGCCGAGGGCTCCTCCAACCAGCCCAGCCAGCCAGCGCGTCCCCGT
CTCTCCCGCGAAGGAGCAGCCGCCATTGCCCGAGCCTTCGGAGGAGAGGAAGCAATGGGC
GCGACGCGCGCGGACGCCGGCGACAAGGAGGAAGGCGTGATGGCGACGGACTTCTTCTGG
TCGTACACGGACGAGCCGCACGCGTCGCGCCGCCGGGAGATCCTGGCCAAGCACCCCCAG
ATCAAGGAGCTCTTCGGCCCGGATCCTCTCGCCTTCATCAAGGTGCCGTGATCTATTTCC
CACGCTCCTTCTCAGATTGAGATCCTCCCTAGATCGACTTCTCTTACTGGTTTAAGCGTG
GATTCGTTTTGCATTGCGGTGGTCGTCTTGCTTTTGTTCCTTCAGCCTTTTTCCCTACTA
CTCATATCATATGGCCAAGCAGTTAGATTCCTGGCCTTAAGTTTCGTTGCAGCGGCTTAT
TTTAATAAAAACTTCCATAAAAAAACCAGTAGAAAATATTTGCTAGTCTGATTAGTTTTT
CCATGAACGAAACTGTCGCTTCATCACAAAGAACTGAGCTGTTACACCTTTTATACAGCG
TAGCAGCATTTTGTTTGGATGCAATCTAATGCAATGCTCGCTGGCCTGAGGAAAAGACTG
GTTGTTACATGTCCACATCTGGATCATGGGCTCCACACCCGATTCTCTAGTGATGTCACC
CTTGATGTTTTCAAGTCCAGGCGGTAGGAGTTTGTGTAGACTGAATTAAATTTCTTGTAG
GCTGAAACCGAGCAACTTTCTGTACATACATATCCACAAACTTGGGTATTATTATGGTGG
AAAAGAGATAAATCATCAATAAGAATAACACTTTCTGTATTTACTACGTACCATTATTCT
GGCAAAAATATACGGTATTAAGTTATCAGGCACTTTGTTGCCCTCAGAGTTCTGCAAAAT
CTATCTTGTTGGTCCTGAATCGGTGAAGTCATGCTTTTCGTGCCTGAAGTGGTTATTGTG
TTCTGCACGACTGCACGACTGCACCTCTTCATCTTTCCTTTTGTAATTGTCAGAACCAAC
TAGGTAGTATTCCTCTGCAGTTACCCATATGAGATTGGCTGCATTTCTGTTCGTATGACC
AGCACTTCTCACCTGCAATGCACCCAGGCAAGTCATGCTGGCAACTTGAAACAGCCATAT
GATTCTCATGCTAGGCATATAGGAATATAGGGGGTCTTGTTTAGTTAGTTTATTTTGTTT
TGTTGGACGGTGATGTTTATGATATTATGATTAGTGATTTAGTCCCGTTGAAATTAATTG
GGGTTCCTCTCAAAAAAAGAGGGGGGGGGGGTCTGAATGTCGAAACTTCTCCGATCATCT
TTGTGTGTGAAAATAACACCCTGTAAAAACAGCATTATTTATTTATTTATCATATTTTCA
TATCCGTCTGAACTTTGGTTGCAGATAGCCGTAGTTGTTTCGCTCCAGCTATGGACCGCC
ACGCTCCTGCGCGACGCAGGATGGTCGAAGATACTGCCGGTCGCTTACTTCTTCGGTTCT
TTTCTGAATCACAACCTCTTCCTCGCAATCCATGAGCTCAGCCACAACCTCGCCTTCACC
ACCCCATCCCTAAACCGCTGGCTAGGCATCTTCGCAAACCTCCCCATCGGCGTCCCGATG
TCGGTGACATTCCAGAAATACCACCTGGAGCACCACCGGTTCCAAGGCGTGGACGGGATC
GACATGGACATCCCCAGCCAAACCGAGGCGCACGTCGTAAAGAACGCTGTCAGCAAGTCC
GTCTGGGTCGTGCTCCAGCTCTTCTTCTACGCGCTCAGGCCGCTCTTCCTGAAGCCGAAG
CCTCCAGGCCTGTGGGAGTTCACCAACCTGACGATCCAGCTCGCGCTCGACGCGGCCATG
GTGTACCTCTTCGGCTGGAAGTCGCTGGCCTACCTTATCCTGTCGACGTTCCTCGGCGGC
GGCATGCACCCGATGGCAGGCCACTTCATCTCGGAGCACTACGTGTTCAGCCCGGAGCAG
GAGACCTACTCCTACTACGGGCCGCTGAACCTGATGACGTGGCACGTGGGGTACCACAAC
GAGCACCACGACTTCCCCAGGATCCCCGGCGCCAAGCTGCACAAGGTGAAGGAGATCGCG
CCGGAGTACTACAACAGTCTGAAATCATACAGGTCCTGGAGCCAGGTGATATACATGTAC
GTCATGGACCAGACGGTTGGCCCTTTCAGCCGGATGAAGAGGAAGGCGCCCAAGAAAGAT
TCGTAGAAGAAACCTCTGCCTCTAGGTTAAATTTTTGCCCCACAGATAGCTGTTTTAGAT
GATGTTTTACTCCTGGGCGATGGGCCACTGTCTCACTGAACTACTGAACTGTTAGCTCGT
AGGCATTTTGCTTGTGTGTTCAGGGAACCGGCACTTGTACCAACTTGTTGCTTCATATCA
ACTCTGCTGTGTATTTCCCGCTGGAGCAAAAATTTCAGATTTTGTATGGTTTTCGAGAGT
ACACATAATTTGTGGAGTAAAAACATACTCTCACTGTAGCAAAATATAAGAGTTTATTGA
CACCATCATCGGTTGACGCCAAGGGAGTATGTGGTACAGGTGGTAAGCAACGCAAACTTA
TATATATATACGTATAATCCAAAGAAACATATTTTGATTTTGGACGATCCTTACTTAGTA
ATCCTTTTTTCAGTTCCTTTTTCTTTCAAACGATGGTAAAATCAGTTAGGGTGTGTTTAG
TAGAGTGCATGGAGAATGTATGAGCTCAAAAGTTTCTTTCTCGGTCCATTTTTGTTGTTT
GGTAGCCTGCACGGGACGTCCTCAACATGCACGAGCTCAGCCCAAATACTCTCTTAGCAT
GAACGAAGAGAGAACAACCGTTCGCTGGTCAGTGAAGTGAGCGACATTGTGTTTTAAAAA
TTCTAAATAATAATTTAATTTTTATAAAGGAGTCGTCTAACTCCGCATATGTTGTCTCAG
CATAGCCGGTCCC