Contig Data
morexGenes
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Map Locations of contig_46464 (6864 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46464

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62341 4 3845 bp MLOC_62341.1 Available Available LOC_Os08g34640.1, FRAME:-2, EVALUE:0.0, 13108.m03624 protein receptor-like protein kinase precursor, putative, expressed





CDS Structure of MLOC_62341






Contig Sequence (6864 bp)

>contig_46464 6864 assembly3_WGSMorex_rbca.fasta
TAATTTCGGGACGGAGGGAGTATATACTGCAGTACTGTAACAAAGTTGCGCTTGACAAAG
CAGCGAAGACAATGAGATTGTGTGAAACTGTGGACAATGAGCGTCGCTGATGATTTTTTT
TCCCTTTTCAGTTTCACACGGAGCATCCAGTTAGAAATCACCACAACAATCATCAAGACT
CAGTTGCCACTTGCCAGCCTAGACCACAGTCAGAACCTGGCCGATGAATCAGACTGTAAC
ATTCTGCATTGCACACAATACACTAATATATATATACACTTGTGCAAAAGTTCAGGCCAC
AAATGTTACCACTCCTACTACAGTCAGGACGAGCCGCCGCCGGAGGAGGAGCCCGGCTTC
CCCTGCTTGGACGACGAGGGGATGCCGGCGGACCTCGCGTCGGTCAGCTCCTTCACGACG
TCGACCATGGACGGTCGCCGGCTCGGCTCATTCGCCGTGCACCTGAGGGCTAGGCGCAGG
ACCTTGCGCACCTCCTCCATCTCGACCGTGCTGAACACTTCGTCCAGGAGCGCCGGATCG
CAGACGGGCCCGATCTGCTCCGCGCCGTTCAGGGCGTGGGGCACCCAGCCGACGATGTCC
ATGCTCTCCGGGAACGAGGGGTCCACCGCCGTCTTGCCCGTGATCAGCTCCAGCAGGACG
ACGCCGTAGCTGTACACGTCGGTCTTGATGCTGTTTCTGGTGGAGAACGCCAGCTCTGCA
AGGAACCAACAAGGCCCATCAGGTTATCATTTTTTGTTACTGAAACACTCATGAAATGGA
ATGCGGTTAACTATCAAGAAATGGTCTGCATCATGCCATACCTGGTGCCATATATCCGGT
GGTGCCGACGACCCCGGTGGTCTGTGGAGCAGCAGAGCACTGGTCCATGATCTTCGCTAT
GCCAAAATCCGAGATGCGCGGCACCATGTCCTTGTTCAGCAATATGTTGCTCGGCTTGAT
ATCTCGATGGATGATCGCGGGGACAGAGTCATGGTGAAGATATGCCAGGCCATGGGCAGT
TCCAAGGGCTATGTTGTAGCGCATGCTCCAGTCCAGGCTCGGCGTCCCGATCCCGTGCAG
GACATCATACAGGCTACCATGCTCCATAAAGTCATACAGTATGAACCCAGAGTCGCCTCT
CACCCAAAATTCCTTCAGCTTTATCAAGTTCCTGTGCCGAACTTTACCAAGCGTCTTCAG
TTCTCTGATCATGCTTTTGTAAGAGCTGCTGCGCGCGGAAATCGCAAGCTTCTTTATGGC
GTAGACCTCCCCTGAACTCAATGTCGCCTTGTACACTGTCCCATGAGCACCTGTGCCTAT
GACATACTTGTCATCGAAGTTTTCTGTCTTCTCTATGATCTCATTTAATTTAGAAGAAGA
GCCTTCAAGCAAATTACTGATTGTCTCCTCACTCTTTGTCTTTGAATCTCGACTCCTGAG
AAGGATACAGCAGAGGATAAGTACCGCTACTGCTCCAATGAACAATGAACCAAGAATAAT
AAGTGCAACCTTGAATCGGCGCTTTAATCCTTTCTTCCCTGATCCTCCACAAGGTTTCAA
CACATCAGATCTCTTGCAAGAAGAATCACTGTCAGGGCAAGAGATACAGAGACCAGAATT
TCCATTGAAGGAACTTGCTGTGGAGTTCAGAAATTTCAGAAGATTTTCTGGCACTGGTCC
ACTGAACCTATTGAAGGAAACATTCAAGGCATGCAATGATTTTAGACCTCCTAATGTGCC
TAGACCTCCAGTTAGGTTATTAACTGACAAATCTAAACTTTGCAGTTCCACCAAATTGCC
CAATGGTGTTGGAATATCACCCACCAGTCTGTTGCTGCTGAGATTCAATGCAATGCCTAG
TTTGATCAACTTTCCTAACGACGAAGGAATGCTACCTCCAAGATTGTTACCACCAAGTTG
CAGCTCAAGAAGCATAACCAACTGCGAAAGAGAATCGGGCAAGCCGCCACTGAACTTGTT
CTCCTGCAACCGTAATTGTACCAGAAGCTTCAGGCTGCTTACGGTCGTGAGTGCCGAACC
ATGCAGAGAGTTGAAACTCAAATCCAGTTTATACAGCTTGGAGCAACTAGAAAGCTGCAC
TGGAAGTGCACCCTGTAGACTGTTCTGTGAGAGGTTAAGAACTCCCAAATTCACCAAGTT
TCCAATTTCAGGTGGTATTGAACCAACAAGTTTGTTTGCTGACCAGTTTATCATTGTAGC
ATTTATGCATTTGCCCAAGCTTGCTGGAATATCCCTACTTAAAGAATTATGACTGAAATC
CACATAGGCCAGCGCTGCACAGTTTCTGAAATGTGGAATGGGCCCAGTAAGATCATTGTT
TTGGAGAATGACTCGTTCCAAACCTGGGCAGTCTGTAACACTGGCTGGGATGCTACCATT
GAGAAGATTGAAGCCCAAAACCAACACCCTGAGTCTTTTCCTTGAACAAATGTACGGAGG
TATTCCACCGGTAAAACTATTGTTGGTGAAATCAATTTGCTGTAAAGAGCTATTAACACC
CAAACCTGGGGGTATGACTCCGGTGAAGAAATTATCGAACAATGTGAGGTTCTCCAATAA
CTTCAGTTCAGCCAACTTAAGAGGTAGCTTCCCAGTGAAACCATTGCTGTAAATAAGAAC
ACTTTGAAGGTACCGGATGCCCCAAATATCCTCAGGAAACTCCCCAGTCAGACGATTCTC
GAATAGAAAGAGCTTCTGCAAGTGCCTCAGATTAGCCAGCTCTTTAGGAACAGTACCATC
GAGCATGTTATGATCCAACTCTAGCCAGTCCAGCAACCGACAGTTACCAATCTCAGGAGG
GATTGGGCCAGACAAGGAGTTTTGAGAAAGCATAAGCTTGGTGAGGTTGCTCAATAGGCC
AAGAGAAGGCGGAATTTGGCCAGAGAAACTGTTGTCGACAAGTGCAAGTTCTCTCAAGCT
ACTGCAATTCCCGAGCCACGGTGGAATACCGCCCCTCATCTGGTTGAACGACAATATGAA
TATCTCCAACTTGCAGTTCTCAAAACTGAAATCAATCTCTCCGGTGAAGCTATTTGCAGT
GGCATCTAAAACTTTCAGTCCTTTCACATAGCTCAAGGTTTTTGGAAGGCTCCCGCTCAA
CCGATTATCCAGTAGATAGAGCTCCTCCAGCTTGGTGCAGTTGCCAATTGAATCTGGCAG
ACCTCCAGATAATGCATTCTGCGTCAACCAAAATGATCTAAGGCTTGTCATCTCACCAAC
TGATGAAGGGATAGAACCACTGAGATTATTGTCATTGAGGAACACATCCTGCAGAAACTG
GTTCTTGAACAACCCCTCTGGTATTTCCCCACTGAGGGAGTTAGTGTACAACGAGAGTGA
TGATAATTTTTTTAGGTTGGACAGTGATTCTGGTATTTCACCAGAAAGGAGGTTCTCGGA
AAGATCCAACTGTTCAAGCATGCTACAATTGCCCAGTTCTTGAGGGATTGGACCAGATAT
TTTATTTCTTGCCAAAACGATGACTTTTATGTACTTTAGAAGCCCTATATGAACTCCTAG
TGAACCAGAAACTCCAGACGATAATAGGTCAAGAGAAAACACATTGTTCCGTTTGTCACA
ACTAATTCCAGTCCAGTTACATGGAGTTCTATCAGAAGCATTCCAACTTGACTTTATGGA
ACTAGGCAATATGAGGTTTTTGGACAGAGCAAGAAGGGCACGACCATCTGAATTCAAACT
CCATGACGAGGAAACCAAAGTGAGGAAGAGAAAAAATTGATGCCACAATACCAGCCCCAT
CCGTTCCTGCAAAAGTTTGTAAAGAAGTTAGCAGAAGATTATATGTTCTCTCAAACTGAT
AGGAAACGAAACAATTGATGCCCAGAATTGTCTCGCAGATATTACATCCTGAGCACAAAA
ATGGCAGTAAATTTTGCAATCCATGGTCAGGCTTCTCAACTTTAGAAGGAATTATGCCAT
GTTATGGCCTAGTATACCATGTACACTCCAATTTATTTGTAAAAAAATGCTGTACATTCT
AACAAGAGCTTTCTCTTGAAAAATATATAACTGCGAGTTGTGTTTCATGGTTTATGGTTC
CTATCTCTTTTCAGCCTAAATACTTCCCATTATATTTGGCATGTAAGCTCTTCTAGAAAA
TCCCAAAATACAAGTCGTGTTAGCTCTAGCATTCAGACATTCTCGTTACGGTAATAAATT
TGTTGCTGCGGCTAGCAATTAATAGTACACCATGGCTGTTAGCAGAGATTGTTGAGCTTA
TATCGCCACCTGTGATTGTGTGGCACCAACGATCTAGGCCATGTGTTATTTCCGCGTAAA
AAGCTAAGGCGCCTTATATAATGGGAAGGAGGAAGTAAATGTTATACTAAATAATATCTA
CTGGCTGTGGTCAAATACACGAGGTCCCTCAAACCATGGGTGCAAACGTTTCTAGACTCA
ATCTGGGTTCCTATTTATTATACTGTCAATTATTCAAACAAAAAAAACTGTCAGGACTTC
CCCTACAGCCTTTTGTTCCTAAAAAAGGTTCTTCAAACAAAAGCTTTGAGGTGATTTTAC
AGGGTTTTATTAGACAAAGGTGATTTTATAGGTGAGATAATTACTTTTGTCTGAGGAAAC
GGCGAGATTATTAGTAAGAATCGGGGTCCACTAAATTGAGGCCCAAGTTGGAAATTGCCA
GGACGTCATTAAATTAATGATTTGTTCATGGATTTTGAAAAGGTCAATGTCATTTGCAAA
GAATATGTGCAACTGATGTTAGTGCCGAGGCGAAGTGGTTTGAAATTCTCATGATAAACA
GAGAAACAAACAGGGAAAATAGCAGGAAATCCAGTTATAGCTTCAATCACAAGCACTGTA
ATTGTGTACTAACAAAATTCACTCGGTTTCAGCATATGTATTGTAGACTTATAGTTGCGG
CAACGCAAATGCGCGGAACATTTGGCAGGCTCGATAATAAATTCCTGCAAAGTCAGACCA
CCAAGCACCATCAACATTACGCACCATGGCAGTGTAGCGACGCAAGTGCGCAGAATATTC
GCAAGTTGGAGTTGGACAATAAACTGAGAGAGCACATGAAGTCAGACGGCAAATCGCCAT
CAACTGGAGAGCCGATTTATGGTTTAGACAAGTTTAGGTGGACCAGAGAAGCAAAACCCA
GGACGACGCCAAGAGGGTAGCACATGGTTTTGCTACCCTCTGATCCGGGGGGTGGAAAGC
TTAGGCTGACCCATTTATTTCAGCGAAAGCAACTCAAAACAAGCTTCCCAAAGAGGTTCA
GAAACGATAACTCTGATCCGAGGGGAGAAAAGATGGTGGATCGCAGCTCTTCCAAGGCAA
AGGAAACCAGTGTTGAGCACCTAGTGATTTGTTCGCTTTTATGATTTGCACGCATCTAAT
TCGACATTTGAGTTGAGAAGCGGCTCCGAGCAAAACCACCGCCAACTTTAATTTTGCCTG
CAGAACGGTTTCGGTGGGCAAGAAAGAACCAGCGCCATACTACTCGCGTCGCGTGGCCCC
CTGGCATTGCTCCGAAATCGGAGACTGATTCTAACGAGAATGCAGAGGCCCGCTATGCAA
CCAAGAACCAAGAACTGGTGTGCAGGAGAAGGGCCCTGCAAAGGCATCGGAAATGCCCGG
GGAAGGGATGAACAGCCGGCCGAAGCATCGGCCGGCGGTTGCACACCAACAAAATATTCC
AGCCCCGCCAACAGCGGAAGCACTGTGATAACTGCAACCCGACCCGGCGGAGCGAGGAGA
AGGGCGCGTACCGTCGAGCAGCAGCAGCAGGAGGCGGGCGGCGGCCACGCAGATCTCAGG
CGCCCGTGGAATGGAGGGCGGGAGGCGGCACTAGCTCCGTGGCTGCTCTAATGGGCTGGA
GCGTCTCCCCATGGACCATGGCCAGAGAGAGATAGAGAGAGAGGGAGAGGTGGTGGCACT
GCCGCACTGGCACACGCATGGGACAGAGAGAGAGAGAGAGAGATGGACGGAGCGGGGAAG
GGGCAGTCAAGTGGGTGCCGACCTCTGTTGCCTGCGTTGGTGGTTGCCGTAGTGAGTGCG
GGGGGCGAGTGGGGGCGGACGCGACAGGCGAAATACGTTCACACGCACGCACGTAGTAGG
AGTATCCGCCGAAGGGTGGCGAACGGTGCAAGTTCCCACACGGACACGGGCGTGCGCTTG
GGTCGGTAGGTGTCAACGAACCGCGGCCTCGCGTCCACACCGGCGCTTTTCTAGGTTTGC
TTTCTTTCATCTTCTGCCTTCAAAAAAAGCGTCTTCCAAAGCTAAATATCTAAGGAGAAC
CTCCGTAGCTAAAGTCAGGCAGAAAGCTGCCGATTCCCCCTGTTGGAAAGCTATTTTGAA
AGTTAAAAGAGCAATATATGGCTGGTAGAGGGGTTATGCTGAATAAAGGTAATGTAGCTA
GCCTGTGGCTAGATGATTTGGGAGATAAGGTCCTTCCGAAGGATAGATATCCTGATCTTT
TTGAAATATGTTTAGACAAGGAGTGTACTGTCGATAAGTTAGAAAATATGAATCGTCTAT
CTTCTTTTAGAAGAAGACTATCCCAAGATATGCTTCAGAAATGGAAGGAAATGAGACAAT
ATGTGTTGGATAAGATCCGCAAAGATAAGGAAGATGAGATATACTGGAAATTAGATAATT
CCAGAGAGTATTCTACTAAAACTATGTACACATGGTTAGAAAAAACCTTGCGGGGGCTAG
CTATAAGTGGATTTGGGGAGCAAAGATTCCTTTGAAGATCCAAATCTTCCTGTGGCAGCT
GTTTCAAAACTCTATTCTTACGAGAGATAATATGAAGAAGCGTCAGTGGCAGGGGGGGCC
CAAATGTTCTTTCTGTGATCAGCC