| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_46453
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62335 |
11 |
2776 bp |
MLOC_62335.1 |
Available |
Available |
LOC_Os02g49470.1, FRAME:+3, EVALUE:1e-87, 13102.m05608 protein tic20 protein-related, putative, expressed |
| MLOC_62336 |
1 |
739 bp |
MLOC_62336.1 |
Available |
Available |
None |
| MLOC_62334 |
6 |
2317 bp |
MLOC_62334.1 |
Not available |
Available |
LOC_Os02g49470.1, FRAME:+3, EVALUE:8e-92, 13102.m05608 protein tic20 protein-related, putative, expressed |
CDS Structure of MLOC_62335
CDS Structure of MLOC_62336
CDS Structure of MLOC_62334
Contig Sequence (6601 bp)
>contig_46453 6601 assembly3_WGSMorex_rbca.fasta
TCGGCCCCGCCCCGGCCGCCGCGACCGCGCTGCTGACGCGCCGCCCCCACGGCCTCCTCG
CCCCGCCGCCGCGCGCCAACAACGACAACAGCGACGCGGTGGGGGCGCCGGACCGCCTGG
TGGCCGCCGTCGCATACCTCTACCCGTTCCTCGACGGCGCGCACCACGGCCGCTTCCTCG
TCGCGCAGTACCCGGTCTTCAACGCCCTGCTCAGCCCGCTCGGCCCCGCCGCGCGCCTCT
TCCACTCCTCGCCGCTCACGCCCTTCCTCCTCTTCATCACCCTCTACTTCGCCGTCGTCC
GCAACCAGCAGGCCTTCTCCCGCTTCGTCCGCTTCAACGCCATGCAGGCCGTCGCGCTCG
ACGTCCTGCTCATCGTCCCCGACCTCCTCGCGCAGTCCTTCGCGCCCTCGGGCGGCGGCA
TCGGCCTCGACATCTTCACCAGCCTGGAGAACACCGTCTTCCTCTTCCTGCTCGTCTCCC
TCGTCTACGGCGGGGGCGCCTGCCTGCTCGGGATCACGCCGCGCCTGCCCATCGTCGCGG
ACGCGGCTGAGCGCCAGGTGATGTGAGCCTGCTCCAATCTTATCCACCACAAAGGGAAAC
GGAATCTGATATACCCCAACATCTTCATGCTTCATTCATGTTTTTGGACCTTAATTCACA
GGTTTAGTATAGTACAGTCCTTGTTATGATCTTAGTTGTAAATTCAATGGATGGGATCAT
GGAAGGTTGATACAATGGCATTATAGTTCACTCCACTATATGACAAATCAGTTGAATTGT
TATTATAACTTTTGATACAAGCTGCATCCTAGGACCTCTTCTACAACAAACAAAAAAATT
GAGTTGAATGAGGGAGAAATACACACACATTGTACAAGAATCTGAACTGCATTTACAAAA
TCAGCAATAAGAAATTCCAGAAGAATTCTGCTGCTCTCCCAATACCATCTGTCCTTGGTA
TATGAATGAAGCTTAGGTTAGTAAAATGTAACTGCAATATAAATAAAAGAATTGCATCAA
TTGTGGTCATGCTGCTGCAAAGTCCTTGTCTGAACTTCACGATGAATGAATTGTCTAGTG
CGGGACATAGCTTCAGTCGCACCGGAGCCTCTTGGTTACCTGGACAGGTTCTTTGCCTTT
GTTAGCCTATGAAATGAAACAAAAATACCGGGTAAATGCTTGCTCTCTAGTTTTTGAGAA
CTATGAACAAGTCATAACATGATTTAGAAACTTTCTATACCGAACTTTTCCACTTTGACC
AGTAAACATAAGTACATCGACGCATCATCATACCTTTGAACTGTCATGTATATGAGCATT
GGCTCTTGTCCGTCGGTCCATATTGATCTCCACAGATATTTTAGCTTGAGACGGGTCTAC
GCCCGACTTCTGTAGAGCTTCCTTCAGTTTATGTAGCAACCTGTCATAAGTGAAAGCAGT
GTTCAGTTAGATACACCATATACATTTCTAATGGTAGCCTTATGTAAGCAAAAATCGGAC
CAGGGGGCAGACCCTTGGGAGTAAGCACTAGAAAGACTCTGGCTGTCATCTTGAGGCCTT
TGTGTATCATGCTTGGTTAGCACTCTGTTGCTTGCATCACAGTTTTGGTTCATGGTTGAC
ATACTCAGCCACGGTAGCTGATTGCTAGGCATACTGTTCTCTGCATTTGAAGGCACCAGG
CATGTTAAATATAGCTCTCACTATTTACGAAGAACCCTGGCTACTGAAAGGTAATTAAAT
AACACAGAAGGAGAACATAAAACTCTATGCCTAATCAGCTAAATACCTGCTATGTTCTGG
GAAGAACTGGGGGCTGCGCTAGTTTCTCTTACACTTTGTGTGCTGAAGAGAGAAGCAGCA
GGTGCACCTGCAATCCCCTTGGAACTGTATTGCTCTTTGTTCATGTCCTCTGTGGTAGCT
GATAAGCCTCCTCCTTGGACTTGACTGATGTTCTGTGAAACCATGATAAAAGAAACAAAT
GAAGGCACTTGGCGTTGATGTATGATGGGTTCGCTTTAAAATATAACTTTTGCGCTCTCT
ATCATTTGCAAGTCCAGTATTTCTGTGAAGGAATTACCTGTGTGTTCCTCCAGCGTGATC
TGTAGTACACTTTGTCCTGCCAAGAAAGAAGGAGAAAGTAAGGTTTGAATCAAGTAACCT
TGACTTTGCTTCTGGTAAAAACGTTGCATAATGTACTTATGGTTTACATACCCAGGGCAT
GCAGTTGGCATCGACGTTGTTCTGCTCCGGAATGCCTGACTCGTATTTTTGGCATTTCTC
TTGCAAGAGCCTTATGTATTCAATGACCTGCAATGAAAATGTTTTTACATGGTGAAATTT
CGCAAGTATAACCTACCAACTGATGTGCCGAATTTACGAGATATTCCGTATACCTCCAGA
AGGAAAGAAGCTTTGTCCCTCTTCTGATCACAGTTGGGCAGGAGGTCTCGGAGTATGTCA
AGCCTGAAAGAGAGCACGGATAGATACTTCTTAGAACGTTACGATCAAATCCTTAGAACG
AATCGTTCTGGAATGGTATGCAGCACTGTGTTTACTTATGAGAGATCATGTCTGGATATA
TGCTCATCTCACTATTTCTACTGCTAGTGTGTTACAAGGTTCTAGCCTATGTACTCTGCA
CAATGCAATTCACTATGGGATTTTGATCTGATGATTAGCTTGCCTGTCATTTATCTTGGT
CCTCCGCCGCTGCTCCGTAGCGGAATGCTTCGATCTGGGACTGCTGGGATCCTGATCGGC
ACTGCTGCCGCTGCTTCTCCCCTCTGCTCTCGACCCTGAACATTCACAGCAATCAGTGTC
TGAACCCGCATGACAGTACCGTACCTTGGTTTGCTAATATCTGGTAACACCAAACATTTT
GAAGCAATCGTCTGACCTCTAGATCTCTTGTTGTCGGTGCTAGAATCTTGCCACATTGTG
GGTGTGGGTGGAGCACTACGAACCATGATCCCAGGCCGTGCTTCATGCGCAACCTCCATT
CTGGAGCCATGAGACGCAGAAACGGACGCGTCCCCTCCGGTGCCAGCCTCTTCCATCGAC
CGAGCGTGAGGGAGTTGCCTGATGCTGAAGGTCCCTACGCCGCCCGGCAGCACGTGCTGG
CCCAAACCTGTCGCGGTGCTCGCCTCGCCATCGCCGGCGCCCCCTGCCGTGCCGCCGCCG
TTGGCTGGTTCAAGCGACTTCAGGGCTGCAGCAAAATGTCAAGTCTTCATGGGTTAGCAT
TAGCAAGCTCTCTCTCACACACACACATGCATGCTCGCTCAGGTGATCTGCAGGTACCAG
GAGTGCATGCCGTTGTGGTCACCAAGATCGATCGGCACTTGGTATTCGACGCGAACAGGC
AGGAGAATTGAAGAGAAAAGAGAAAAAAGGTAGAGATCACCGGCCTCAACGGAGATGCAA
GCATACACGGCGACGGTACCTGCTTGTTGGTTGGGGCGCTGCCTGCGCGTGAACGGCGGC
GAGCCCCCGGCGCGGAGCGAGAGGAAATCGTGAGCCGGCTCCTCCCCTGCGAATCACGCG
TGCGCGGCGTCAATCGACGGAAGGGAGAGGGTAAAAGAGAGGAGAGGCCGATGGAACATG
CATGCGGCGGCTGAGAGACAGGAAGTGAGGAAGACGGTGGAGTTTCTCGTGGCTGGCATG
TGTTTGCTTACCTTGGAAGAGCTCCATGGCCGGGATGGGGTGCTCAGGAGATGTGTCGGG
GCCGCCTGCCGTCGCAGCAGCAGCAGGAGGAGGAATGACGGTGCCTGGATCTTGCTGCTG
GCTGGTACTCTGTACTCCAGTACTGGTGGATGGAATGTTCAGCGGGTTCGGGTGGCAGAG
CTTATTATAGTCGGCACTGGGCAGAGTCGACGGAGGAGAGGCGATTGACAAGGGTTTTTA
ACAAAGTGGGAGCCTGCCTGTCTCCTTGCGCTGCCGTGTCTTCAAAAGTTTATACGCATA
CACAACAGCAATGTCTCTCTCTCTCTCTCTCTCTCTCCCCTCCACGTCTCCTGCTCAACG
TAAAAACACAGGCAATTTTGTCGGCGTGGCGGCCGGTGATGCACGGCCGATCGCCGGTAA
TTGAGGAGGTACGGTACAAAACGGACAACGGCGGAGCAGATGGATGGATGGATGGATGGA
TGGATAGATAGATCCCGTGCGCGCGCGTCCTCTCTGGAGGAGAAGCGAAAGAAAAGGGAG
CTAGCCAGTCACGTGCCGAGCCGCCGCCGACGAGAGGCCTTGTCGTGGTGGAGGTGGAGG
TGGAGGTGGGTGGGCCTTTCCCTCTGTCTCCACCGCCGCACATGCCGATCGATCCAGGCG
GCAGCTAGGCAGCTAGCCGGCGCGCGCATGCATGCGTGCATGCATGATCCCGCGCGCTCG
CTCGCTCGCCATCTCGACGATCCCATGTCATGTCATGTCATGTCATGTGCCCAGCGGGTG
AGCCAGCGGGACGCGGATCGTCGGCACGGCACGCGTGATCCGTGCCGCGCGTCGCCATGA
TGGGTGCTCACCGTGCTCTGGCTTTTGGCTTTTACAACCCCGATCGATCGGAGACGGCAG
GGAAGGCGAGGATCTACCTACCGGCCGCCCGGCATGTTTCAACCGCCGCTAGCTGTCTCA
GATCAGAAACCGCCAAAAACAGCCGGCCGGCCGGGCCGGGAGATCAGGGTTGATCGATCC
ACTCATCCCTGCACTGTCCCTGTCAGCCGTGCATCAACGTAGGTGCCGCTTCCGCCGCCC
GTGCACGTGCCGGCAGTGGGGCTCGCTCTTCTCATGGTCATGGGTCCGCCCGTCACCTCA
GCTCAGGGGAACGAACACGACGTCCCTATCACTCACCATGCCGCGGTGCATGCATGAACC
GCTCAGCCGATCGCGTCTCGTGCCTTCCGCACGGCACCACCACCAACAGCTGCCTGATGG
CACGTGAAAGAGAGATCCGATCACGGACGCCTCGCGAGCGTCAGATCAGATCAGGTCAGG
TCAGAACGCCTGTTTGGTTGCTTAACAAATCTGGCGAGGTGAGGTGACGGAGCAGCGGCG
ACGACGACCTTTGTAGTTCTAGCTACGACAAGTAGCTCGAGATCAAGCTGGGGTTCATGA
ACCCAGTGCAGTGGCTACCTACCTAGCCTAGGTAGCAGTACGTAGGGGTCAAAACTAGGA
CCTGGCTAGGCTAGCTCACGCAGCAGCAGCAGCAGCAGCTTGGCGCAAAGTCGTTGAGCG
ACAAGGCAAAAACGACAAGCTGGGTGCGTGCATGTGGCCCGCGCAGCCCCACGAAGCTTC
CCGGCCGTTTCCTCTTGAGGCATAGCGACACACGATTACACAGTGCAGCAGTAGTAGCAT
ATCTGGATCGATCTGAGAAATGATTTGTAGTAGGATGGATCCCATCATTGACAGCAAGGG
AAGAGAGGAGCGGTCGATCGGCGTGGCCGTGCCTCTGAGCGCGCGGAACATTCCCTCTGC
AAAAACCCAGAGGGCCAGGCTGAGGAATCCGTTTAGGGATCAGTAAACAACTCCGATCAC
TAGTAGTAGTTGGTTAGTTAATGAGGTCTGGTTGGATTAGTTTACGATATCCTCGAGCTC
GCCGGCAGATCTGAGCCTAGTTTAGGCTTAGCTTGGGGCGCGCCGTCACGTGGCCAACGC
ACCCCGTCCTTCCGTCCGTAGCCACCGCCGGGCAATTACTTACTCGACCGATCGCGATCG
ATCCACTGAGTGGCGTGCTAGTGCTTTCCTTTGCTTTGCTTTTTTTTTTTTGTGTTGCTT
GTCGTTAGCTGCAAAAGTACGGCCCCGTCCCGACTCTACATCTTACAAGCCACGCGTACG
TACGTACGTTCGGACGAATTCCGATGAAACTCGTCTGGTTTTCGTTCGGCGAAGTTCATG
CGAGACAGCGAGAGTTAGAGCAACTCCAACGGACCGATTCAAATAGACGGTGATTTTGTT
TGTTTTTTGTCCGTTTAAGTCGATCAGATGGACATGAACGTCCGCTTTCGTAAATAGGTC
GGCTCGTGCGTCCAATGCTGACCGGATCTATTTTTATCGGTGTGAAAAAAAAATACATAA
TGCATTAATTAGTTGGAGTTTTGGTTCTGGTCGCTTGATTTTTGGTCCGATTTGTGTGTG
CGGAACATCGATCTGTTTTTTAGGGGGGGGAGGCATGCATATGCATGTGCATGTGATGTG
AGCTCGGGGCTTTGGGAGTGCGCTGTCGCCTTCTTGGCACGTGACACACCTATCATTCGC
AACTTTGGATCGTGATCCATCGATGCATCGCCGCCGAAGAAAGAAAGTTCACCACGGAGG
GTTACATCACGGCAGATAGCCACAAGGGAAACTAGTGGCTACTGGCTACACGAATCGTAA
TTTAGTGTAGTATATATTCCATTAGGTGAAGGGCAAGGTAGCAGCTGGAGGAGCTATAGC
TAGGAGAACTTAATCTTGTGAGCGCCGTTGAGGTGTCTCGCAGCCGCGGCCATCCGCCTG
GCCGGGCCGTCGCCGGCGACCGGCTCGCCGTCGCCGCCGCCTTCGGAGCCGCAGCAGAGG
CTCCCCCCCCACCACCGCCCCGCCGCCGCGCCGGGGGAGGCCCGGGGACCGCTGCCGCCC
G
