| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_46379
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62278 |
1 |
4456 bp |
MLOC_62278.1 |
Available |
Available |
LOC_Os03g23960.1, FRAME:-3, EVALUE:2e-75, 13103.m02833 protein IQ calmodulin-binding motif family protein, putative, expressed |
| MLOC_62277 |
1 |
2969 bp |
MLOC_62277.1 |
Available |
Available |
LOC_Os03g23970.2, FRAME:+3, EVALUE:5e-178, 13103.m02835 protein diphthine synthase, putative, expressed |
CDS Structure of MLOC_62278
CDS Structure of MLOC_62277
Contig Sequence (7849 bp)
>contig_46379 7849 assembly3_WGSMorex_rbca.fasta
TAGGAAAATTTTGAATTTACTACGATACCCAACAGGTTCTTTGTGTGAGTCACAAGAAGA
GATGAAAAATGTGGCACATTATTTATATGAAGAGTTTTCTTCTTCTCAGCCATGTGATAC
TGTTGTGGTTCTTGATGTTATTCCCCAAAAAGTTACTAGAGAGATGAATGATGATTTGTG
TAAGCCATATTCTAATTAGGAGATCAAGACTGCTTTATTCCAGATGGGGGCAACAAAGGC
TCCAGGGCCGGTTGGTTTTCCAGCATTATTTTACCAAACACATTGGAATTTTCCGGAGGA
GGAAATTTGTTATGCTGTTAGGAACTTTCTTGAAGGTAATCCAATCCCTGATGGTTTATG
TGATTTTGTGATTCTTCTCATTCTTAAGGTGGCTCGGCCAAAGCAACTAAACAATTTCAG
ACCCATCAGCCTTTGTAACGTGTTGTACAAGATTGCTTCCAAAGTTATTGCTAATCGTTT
GAAGTTGTTCTTGCCTGTTATCATTTCTAACTTTCAGAGTGCATTTGTGCCTGGGCGTTT
GATTACTGATAACACCATTATTGCATATGATTGTTTGCACACTATTCATCAACAAACGGC
TAAGCAACCTTTCTTTGCCATGAAGGTTGATATGATGAAGGCCTACGATCGTGTAGAATG
GGATTATCTTCATGGTTGTCTCTCCAAGCTTGGTTTTGATCTTGTATGGATTTCTTCTGT
TATGAGATGTGTTACTAATGTTCGCTATGCTGTCAGGGTCAATGGGGAGCTTACTGAACC
AGTTGTGCCCTCTAAAGTCATCCGACAGGGTGACCCAATCAAGCCTTACTTGTTCCTTTT
GTGTACTGAAGGATTGTCAAGCATGTTACTTCAGAAGGAGAACCGTGGTGAGCTACATGG
TATAAAGAATGACCGTCTAGGCCCACCTATCTCACACCTCCTTTTTGTCGATGACAACAT
TTTCTTTGCACGAAGTGATAGACGTAGTGTGGTGGCTTTAGAGTCCACTTTGAATCTTTA
TTGTCAAGGTTCTGGTCAAGCAGTCAATAAGGAAAATCTTCATTGTTTTTTGGAAAGAAT
TGCCCAAAAAAGATCAAACAAAGAGTTAAAAATCTATTGGGGATTTTGAATGAAGCTTCC
AATGATTCATATCTTGGTATGCCAATGGAGGTTGGAAAATCACCAACTAACACTTTCAAG
TTTCTGCTTGATCGAGCGTGGGCTAGCATCTTTGGGTTGTCTGAATGTCCAATATCCAAA
GACGGAAAATAAGCTTTATTGAAGTCAATCATACAGGCTATCCCTACATACATTATGAGC
TGCTTCCAATTGCCTATTGATACTTGTGAGAAATTTCGTCAGGTTATTGTCGATGAGTGG
TGGGATCGCGAAGTTGGGAGATGGAAAATGCATTGGCGCTCTTGGGAGTGGCTGGCTACT
CCTAAAGCGCTCAGTGGCATGGGTTACCGTGATATGGCACTATTCAATTTGGCTATGCTC
ACGGAGCAAGGATGGCGGCTTCTGACGGATCCAAAGTCTCTTTGTGCTCGTGTCTTGAAG
GGATGATATTTTCCTACTTGAGATTTCTGGAATGCTTTGGCGCTGAGGTCGGCGTCTCTA
CTTGGCGTGCAATTTTGGCTGGACGGGATCTGCTACAGAAGGATGTTAGGTGGGGTATTG
GCAATGGTGAGAAAGTTTCTATACTCTTGGGTCACTCGATCCCCTAAACTCCACCACATC
GTCTACAACCATTACTGCCTATACCTGCAAATGCCAAGGTAAAATGCTTGATTGACGAGG
AAACTTGTTCATGGAACGTGGATTCGATCAATGCTTTCTTCCATGATGATATTGCTGCAT
AGATTCTACGTATTCCTATTAGCAGGTATGGTGGGGTTGATTTTGCTTGTTGGCCTTTCA
CAAAGTCTGGGGAATACACGGTGCGCTCAGCGTACAACATGGCAAGATCGACTCAATTTT
TCGAATCTCGCAGCAAGAACGGGTCTGGACACACCTCCAATGTAGTTGTCGAGGAGAAGA
GTTGGAAGGCAATTTGGTCTGTCAAAGCTCCCAACAAGATGAAGGTCGTTCTTTGGCGAT
TTGCTCATGATTGTCTTCCATCCGGGGCTCACTTGCAGCGGCGCCATGTTCCTGATTCTA
TGAATTGTTGTTTCTGCGGCCGTCTAGCTAGCGAGCATGGAACATGCTACACTTTTTTGT
CCTCGAGTTCGGACGGTCTGGGACGCGATCAAAGCATGGTATGGCACCAAACTCTCTCGG
TCCTCCTTCAGAAATACAAAACACTGGCTCTTTGATTTCTTTTCAAGATCTTCATACAAA
GATGACACGATTATGGCTGTGTCTTTGTGGCATATATGGGAAGCTTGTAATGAGGCGCGC
CACTCGCCTAATATTCCTCATCCTCGTCATACAGTGGAGAAAATTCATGCATACACTTAT
CTTATTATGCAACACTTTTTTAACTCTGAATGAGTCATCAGGTGTGAGTCTTTTTTCACC
AACACAATATGGACTCCGCCGCCGTCACGTGCTATTGTCATCAATTCAGATGCTGTTGTA
TTTTCAGATATCAATATGTGCGGAACTAGTGCCGTGGCCCTAAATCATGATGACGTTTGT
GTTGCCGCATTCACCGAGCCTCTTCATGATGCACTTGAACCTGAACTTGCAAAAGCTATG
GCTCTTCATAGGGTCGTGCAACTAACATGAGATGAATACTTCTTCAATGTTATTTTTGCT
ACAAATTGCCAGTCACTTGTGAATAGAATTAATGCCAACACTCTTGACCGTTCCATCATT
GATACTGTGATAAATGATATCGAAGTATCTTCGAGAAGTTTTGACTCTATGATGTTTAAA
TATGTTCGTCAGCAAATTAATATAGCTGCTCATATTTTAGCTAAGTCTTGTAAGAATGTA
TTTAGTTTTGTTTGCCATTCTACCCAGAATGTATCTGAGAGACTCTTTGTAATTTTATTT
TAAGTGATCAATAAAGCCGACGTTTCTCTCTCAAAAAAAAAAATCGTTTCGCTTTGCATC
CCGAGTAGTAGTACATGACTACAGCACGGCCGAACAGACGGCGTTGTGTAGTCGCCAAGT
CGCCAGTATTCCCCACCCTCCCTCCACGAGAGAAGACGGAGCACGGAGAAAGCGAACGGC
CGCGGCGATGCTCTACATAGTCGGCCTCGGCCTTGGCGACGAGCGCGACATCACGGTGCG
GGGGCTCGACGCCGTCCGCCGCTGCGCCAAGGTCTACATGGAGGCCTACACCTCCCTCCT
CTCTCTCGGCCTCGACCCCGCCTCGCTCGCCAACCTCGTGCGTTTCTCTCTTCTCTTGGA
TGGCCACCACCTGTTCGCGCAAATGTCTGCGCGGCCGTACCAGGGTAGGGGTCTTCCCTC
ACCTCCATTCACTGCCCGTGTCGTTGCAGGAGAAGATGTACGGCAAGGAGATCACGGTTG
CCGACCGCGAGATGGTAGAGGAGCGCGCGGACCAGATGCTGAGCGAGGCCGCGGACGCCG
ACGTCGCCTTCCTCGTCGTTGGCGACCCGTTTGGGTAATGGTTGCTATGCTTTCTTCCAT
TATTTGAACACTTTTGCTTGCTCGCTCTGTTGGGTCGTGTGCGTGTAGGATATGCGTGCT
CATTTCTGTTCTTTCAGAGACTTTGGTACGTGCGATTCTGTTCAGTGTGCCATCGGCAGT
GCGTTCATTTGTTCGTATCTGGACGCTCCTGTGGTGAATTATGCATTTATTTGCATGCCC
TTTTAATCAAACAGACTGTACATTCATATATGTGTGGGCATGCTATTTATTTTTTGTCTT
TGTCCATTCACATGTTTGCCCTGGATGCATGATCCTGTCTTTGTACATGCCATTGTGTAA
GCTAAGTGTGTGGACTTTCTCCCGTGTGTTCACATATTTTTATTAGTTTTGCAAGTCAAA
CGTTTACCCTGCACATAATTGCGATGAAATTTGCAGGGCGACCACACACACTGATTTGGT
TGTTCGTGCCAAGAACATGGGGGTAGAGGTTAAGGTTATCCACAATGCATCTGTCATGAA
TGCTATTGGCGTTTGTGGGTTGCAACTTTACCGCTATGGAGAGACCATCTCTATACCTTT
CTTCACAGAGACATGGAGACCAGATAGTTTCTACGAGAAAATTCAGAACAGTCGTCGACT
TGGCTTGCATACTCTTTGCCTACTAGGTTGGTATTGCTTTCTTGAACCATGCAAAGAACA
TTTAGCACCTGGCATTCCTGAGATTGACCAGGACAGGCTGAGATAGATGGCATGCCTGAC
TGTTAATATTTCTCCACATGATATTGGATCTTTATTCTTTTTATGAAAAATGCACAAATG
TTCAACATATTTACATACTGTGGCAAGATTAAGATATAATTCTGATGACTGTGTGGCATT
ATTAGACATTTGCATAGTATTTCCTAGTCGCAGTTTCTTGTAATAGTGAAACTACTATCA
CTTTGTCTGCAAGTTATGATATAATTCTGATGAATATACGGCATTACTAGACATTTACAA
ATTTCCTAGTCATGGTTTCTTGTAATTTAACAGCAACCGGTGCTGCTCCAATCACTTTGT
CTGCAAGTTAAGATATACTAGTCCTGATGATTTGAACGTATGGCAAGTTTGTTTTCAGTA
CTAGTGCTCATACTACTACTACCACCACGTTTATCTGCTAGTGCTAGTGGCTTGGTTAGG
GGTTCTGGTTATCAGATAACTTAGTAGTTCTCTTATCCAATGCAGACATCCGTGTTAAGG
AGCCAACACTTGAGTCCTTATGCAGGTAATTTACGTAATTTCTATCTTTGAAGTATGTTG
TGGTGAATAACAAAAAAAATTCTAACGAGAATTAGATATGCACTAGATATGTCTTGTCTA
TGCATTCTCCTCCCAAAGACTTGCTCAATGTTCTGTGATGCAATATGTGTCTCTTGCCAT
TTTGTATAATTAAGGTGTTTGCTTTCAGAGGAAAGAAAGTGTACGAACCAGCAAGATTCA
TGACTGTGAACACTGCAATAAGTCAGCTTTTGGAGGTGGAGGAACTGCATGGGGGATCTG
GTATTTTCTAGTGTTTGTGAACTTAATTTTCGTATAAGTTAGCTTTATTTGTAACATTCT
GATCAATATCACAACCTGATAAATATTCTGCCACACGGATATCCTTAAGAGTGCTTTAGA
TGTTCTGTTTACTATATTATAAACCGAGTCTTACTGCAAAATGGACATTGAAAGATCATC
TATCTATTCCCAGCATATGGTCCAGATTCACTATGTATGGGTGTAGCTCGCCTTGGAAGC
GATGATCAGAAGATTGTGGCTGGCCCCATGAAGAAATTACTAGATGTTGATTTTGGACCA
CCCCTTCACTGTCTCATTATAGTGGGAGAGACTCACCCTGTGGAACAAGAGATGCTAGAA
TTCTACATGATCAAGTAGTGATGAGCTTTCATGTAAGTTTCACTCCTTCCCTGAATGAAG
AAAAATCATGGTTATTAAAAGAGATCTTTACACCTTTTGCTGTCACCAATGTTCGCTCAT
TGTCTATTTATGTCTACATTATTAGATGAGGAACCTGTAATCTAGATGCATGGTCCCCTT
ATGAAGAAAAGAAGCTCTCTTGAAGCGTGGATATTTGCTGAATTTTGCACTCGGAAGTGT
CCACCAGGAGTTTGCTGCTGCCTGCTGTATCGGTTACTCGTCCACCGAATAGAACAGACC
TTGGTTACTCATTCGCAAACATTGATCATAATACGCCGAATTATCTTCTTCTTCCATGTT
GTATGTGCACACGTCTATCATTTGGAAAGTTTGCAGATCCATATTGCATTATCCTTATCG
CAAGCACAGTCAGTTTGAGAAGGTTTCCATGGTCAGACCCAGCGAGAGCATGCCCGCCAA
ACAAGGCAGCGTTGGCCACATTACAAAGAAGTTTGTTTTGTGTCTAGCGAATAGGGGTGT
AATGCTCCATCTGCATCTGGTGCAGCGCGGCTTCGGAGCCGAAGCTGTGGCGGCTCGGGG
ACCTCCTGGAGCGGGTCCTCGACGGCGTCATTGGGCCCGCCTTGACACGCGGCGACCGCT
GCGCAACCGGCGGCCTGCTGGAGCGAGCAAAGCCCATGTCGCTGGCGATGGACGGCATCG
GCGACATGGACGGGATCGGTGACATGAGGCGGTCGGCGAAGGACGGGAAGCACTGCTCCG
AGTACGCGTCGGATGGCACGGCGAAGCGCTCCTTGGGCGTGCTCATGGACCGGAACTTGG
CCTTGGCGGACGCCGTGGACGCCATGTACCCCGGGAACGCCGCCGCCGGCGAGCAGGCCT
GCAGTCCGTCGTCGCCCCTCCCTGGCGTGCGCCGGGCGCGGCCGAAGGACCGCCTGGACG
AGTAGCCGAGCCGCCTGCCGTAGCCGTCATCGTCGTGGTCGTCGTCCTCGAGGCAGGTGA
GGGAGTCCCTGGAGCGAGGCGGCGGCGGGTGGGGGTGGGTGATCACGTCTATGGCCACGT
CCTTGTCGAACGGCTGCGAGCCGACCCACTCCTCCAGCCAGCTCCAGCGCTGGTTGAGCG
TCTCCATCTCGTCCCTGGACATGGGCTGCCTCCTGATGCCGATCTTCTCCTGCCATGATT
TTGTTTTGTTTGTCAGCCACACCACAGCCACAGTGCGTGCGTCCATCCCGGAACGCTGGC
ACTTAGAGGTTACTAGAGTATTACGTTTTGGATGGAGGCGTACTGCAGCGCGCGCACGCG
CTTGATGGCGGCTTCCTCCCTGCTCCTCATCACGGCGCCCATCTCTTCCTTGGAGAGGGT
GCTGCCGTCCCACCCCCTGCTGTTCTGCTGCTGCTCCTGCACGGCACACGACACGGCATG
AGGAACAACAACAAAATACTCATACTGTAGCACGTACAGTACCAGACATATTCGTCCCAG
GACACGGCTTTGCTTCACCGACGGGACGGGACGAGATCAATCATTTCCGCCCCGCCGGCA
CACCAAGCGGCGAGAGCAACTCCGATCCATTTTGTTCGTGCGAAAAGAAATGATGGCCAA
CGCGTCACCTATTTACAAAAGGTGTCCTTGCCAAGACCGAGCAGTACAACTGGAATGGGG
GTGATGGGCGAGTGAGTGAGCGCGCCACCCGTCTGGTTGAGGGCGATGTCCGAGGAGGAT
CAGGCCTACCTAAAGCACTGCCGGCAACAACAGTTGGCAAAGGAACGCCTCGAGGGCCAG
CGGCTCAAGCAGCTGGAGCGCAACGCCGAAGTCAAGGAGAGGGAGCGTCGTGTCGAACCC
CAGCCAGCGGCGGTGCAGCCACTGGTGAGCGACGTCGCCGTCGTCTGGGAGACGATCTTT
CTCTGGCTGGCCCGGCGCCGACGCTCGTCAACCTTACTGGTCCCGAGGACGACGACGAGG
ACGTCTAGGCCAGCACGCCTCCTCGGCTTTGGTTTATTTATTTTTAGTTACTGCAATGTG
GATTCGTGGGACTATCGTCGCGTATTAATGTTTAATTAACGTTTTTTTTCAAATATTTAT
GGTGTACCTTTTCACGCTGCCTAAAAAAGTCACGACAGCGTTAGAGCGTAAGAGGGTGTT
TGTTTTCACGGACTTATTGATTTTGAGACTTAAAAAAGTCCCTATAAATCCCACCTAAAC
CAAATACAAGGGACTTATTGGGACTTATTATGGTTATTTGGGACTTATTAAATAAGACTC
TCTAATAGGAGCTTATTGGGACTTATTCTGGTTAGGTCCGCGGTAGTCTTCCGATGCAGT
GGCCGCCGCCCTGCCCCGATTAACGCTCGCACCGCCCCAATCGCCGCCG
