Contig Data
morexGenes
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Map Locations of contig_46299 (5877 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_46299

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62210 4 3315 bp MLOC_62210.1 Available Available LOC_Os05g33030.1, FRAME:-1, EVALUE:0.0, 13105.m03407 protein kinesin motor domain containing protein, putative, expressed





CDS Structure of MLOC_62210






Contig Sequence (5877 bp)

>contig_46299 5877 assembly3_WGSMorex_rbca.fasta
AGGCGCAAGACACATGATGCCGATCTATCCAGGTTTAGGGCCCTCCGGTGAGGTAAAACC
CTAGTCCTACCCGTGTGACTATATGAGATCACAGTACAAATGGTGCTCCTCGAGCTGCTC
GTGAGGAGGGAGACGGAGCCCTTGTTGCCGGCCTCGCTACCTCGATGGTGTGTGTAGTTC
TGGGGTCTAAAGGTTCGCTGGTTGCTTATGGGTGTGCCCCTCTCTGGGGGCTGAGATGAG
GCTTTATAGTGTAGCGTGAGATGTACAATTGTGCGAAAAAGTAGGAGGCAGGACCCGACT
GCCAACCTCTCGTCGGCTGTCGGGTCTTGTCCAATGCGGGGCCAGCCGATCGTGCGCCTC
AACAGCTAACGTGCCGGTTGTCAGGGAGTTGGTAGGGGTAAGCATGGCTACATGATCGTC
TCGCCCAGTCAGCCTCGATGGTGACAGGGGTCTGTAGCCTCGCTAACCCTTACATCATTG
CATGGCCACGCCGAGCTTGTCAGCACGCACAGTGGTCACGAGCGCCTCTGCATCGGGTTT
CGTCACCGTACGTCGATACAGTTGGATGGGACAGGGGCTGACGCCGGACCAGCCGGCCAA
ACCGAATGCCGCCAGTCGACCGTGAGCGCGTTGATCGGGCGGGCTGGCGGGCTGGGGGGG
GGAGTAGTTGGCCCCAAATATCTTGGAGATGGATTCCTTCTGCTTGGGTATACCCGGGGC
CATATCCCCGTCAAACACACTACTATTTAGATGCAAATTCTAGTCAGAATATATATATCA
TTTCAAACAAATGATATGAATAACTGGAACCTAGTTTTCTTATCAGTAAGTAGCATAATA
AGCAAGCAGCATCCCAGACTGATGCCAAAGGCTAATCCGTCAGGGTATGTGCCTGCTAGA
TCCCTTTTTTTCATGAAAATAAAGGTAGTCTGGTTAATTATACGCAGCCCTGAAAGTAGA
CATTTATCATAGCCCAGAGAACCCCAACACAAGTTCTCTTATCAACACAAGTTCTCTTAT
CAACACAAGCTCGCAGTCCCAGCCATGGTACCACCTTCCCTGAGGAAGCAAAAGTACCAC
CTTCCCTGAGGAAGCAAAAGTAAACTGGTTTTGCACCCCTGTTTCAACATTCCAACCTGA
TCTTCTTCACCTCCCAAGCACGCCCGCTTAGAGGACAGACATCCTCCTCTTGGAGTTGAA
CACCTGCTGCGCATTGCCAAATCTCCCTGCCATCATTTGCTCACGCAGACTTCGATTAAA
TATGCCAGTACCAGACACCACGGAAGTTCTTCTTGCTGGAGCAGGTGAACCAAGAGCTAC
TCTTTTCTGGATACTGAAGCATAGCTTGCTGGCATTTCCAGAGCCTGACTGCAACCTCAA
CTTCTGCTGTGGAGACAAGATATTGTTCCTCGACTTCCGCATGGACAGCGCTGGAGGGCT
TGAGAACCTGCTGCTGCTGCTGCTGCCAAACTCCATTCTTATAAACTTTCCTCTGACATC
TGGAGTTGCATGTACTGCTGGCTGTGGTGTTTCTGGAATTGAGTTAAATGTAGCCTGTGG
TCGTGCTGTTCTTGACATTTGGACATGGGACAGTCGTGACATTGCCTTCTCAGGAAATAT
GGACATCCGCTCTCTCTCGCTTGGTAGGATCGCGATCGAGGATCGCCTCTTAGGCTGGAG
AGGGATCTGTCGCATCGTGGGAACTAAAGATACACGCCGTGCTTTGCCAACAGCCTTGTC
CACAACGGTTTTGTTTGTCATAGGGACGTTCTCTTTGTTCTGAGCTGAAGATCCCTTACC
AGCAAACCTCAGTCTGGAAGGGCCTGAAGGTTGTGGCATGTTGTTGCTTGGTGGTCTCTG
CCTCATAGGAGCAAGTGGTGGTCTCTGCCTCACAGGAGCAGCAAATGATGGCTTCGTGGA
TTTATTCGTATCCCTCGCAGCCTTCTTCTCATTAGCTAATTCGTTCTCCAGCTCTCTAGC
CTGTACAAATGGAAATGTTATAAACACAGACCAGAATAGGAAAATACATGCTGATGAGTT
CTGCAGGCTTGCTCAAGCAAGCAGAACTGAATCTCTTACTTACCCGCTGCTGATGAGTTC
TGCAGGCTTGCTCTGTCTCCCTTATCTGTTGCACAACATTCGTAAAAACTTAGTTCCATA
TATGACTTGGTTTTTAGTCTGTCAGTTAGCAATTATGGTTGGCACAACATACCTTTTCTT
GAAGAGCTCTGAATACACTCTCACGAGAAGCATACTTGAGTTGCATCAGTTGCAAGCTTT
CGTTCAACTTCGCATTTTCCTTTTCCTCATGACAGAGTTTTTCGGCCTGGAACAATTTCC
AGTTAATACAATAGCTGAATCATGTTATAATTATTCAACAAGGTCAGAAATGAAGTACCA
TCTGCTTGAGCTTGAAATTTTCAGCTGGATCCACTTGCTTACGAGCAGGGCCATATTCAA
TAGCTCGAACTCTACTAGCAAAATTTAACGAGCATAGAGTTTCTCCTGAATCTGCAGAGC
TTGGACTTATCTGCACAAACATAAGTGTCTTGCAATCTCCACCTGCAACAGTCAATGGTA
GTGGTAAGTGGTAACACTCTTTATCTCTTCATTTTTGTCTTTGGACATTCCAGTGCGTAA
GCACGTTCAATAGAAGGAGACACAATCATAACCATAGCTAGAAAAAAATCAGTGCACTTG
AATAACTCTTTTAGAAAGTCACTTACCTAACGAGCTTTGGAGCAGATGAGTTAGCTTGGA
GTTCCTACATTTGACAACAAAAAGTAGTGGTAAATCTCAGCTGAGGGTATGCTTCTTTAA
GTAACTGAGCAAGGCAGATGTTGAAGCATGTGGATAATGAATAAGACTGACCGATATGGG
ATGTGGGCATTTTTGGAGGCAAGGGCAGCGATAACATCACCCAGTGCAGAGAGTGATTTG
TTGATGAACTTTGCCTCCTTCAGCCTCTCTCCTTCTACTTCAGTTTTAGCCAAGCGCTCA
CTTCCAGCAAGGTCAACCAACCACATGTGGCTTCTGCTCCTTTCCCCAGTCACCAAATGC
TCACTTGTAACGGTGACCCTAACCAAGCTGTAAGTGCAACAGAAGTCCAGATATCATTAT
CCCAATGCTGAAATAATGTCATTAACTTGACTCTAGTTGCTAACAGTCAATCATGAGTAG
AATGAGTGTCATACTAGTGTAGAAATGATACCTATGGGAGCGACTGCTCAGTTCATTGGC
ACTGGTTGATCCAACAGATCTATTTCTAGCCCCAGCTTTCAGTTTCTCCCACACACCATC
TATTGTAGAAATTGGAGCTTCAATCAGGCCAGGCACCTCTTGTGCCCCATCAGCACTTTG
CTTTATGTCCAACCTTCAGATGCAACATGATATTAAGTTCCATTCCTTACTACAGAGTCA
GGATAAATGATAAGAAAGGAGATGTACCTTTTTGATGTTTGTTCAGAGTTTTCATTAAGA
AGGTCCCTGATTTTTTCATTATAGACTTCCAAGATACTCACACCAAATGAGTATGAGACG
GATGAGCTTCTCTCCTCTGACATCCTGAACAGTTCTTCAAGAGCCCTGTAGTTGACACCC
CTATTCTCTGGAACACCTTCCATAGTGAAGGTTTTCCCTGTTCCAGTTTGCCCATATGCA
AAGATGCATACGTTGAAACCATCCATCACTGACCTCACGACTGGCAGGCTCTCAGCAAAT
ACAGCCTCTGAAGGAAACAATTAGAATAAAACTCATTAAATTGAACATCCTTCAACTATA
TAATCATCTGTAAAATAGATTCAGAGAAGGAATATATATGGCATTAGTTCAATCAAAACC
CATTAAATTCAACATCCTTCAACTATATGATCATCTATAAAATAGATTCAGAGAAGAAAT
GCATGTGCCATTAGTTCAATCAAATTATTACTAAAATATGTTGCCTGGGATATGCAATTA
ACCTCCATTTCATATCACAAAGCTATGAATTTGGAACATAAGTTAGGGTATATGTGAAGC
AGAGTAAGGACAGTAAATACCTTGATCATCAGCCTGTCCAAAAACATGGTCAAATTTAAA
GGTCTTCCTCTCTTTTTCCGTGGGAACAAACTGAAGGTCCATCTCCTGGGACGGATCAAC
CTGAACCACTGATGAGCACCCATGGGAGATCTCATCGGAACTTAAAGGGCGGCACCGGCA
GAATACCCTGATGTTTCCCCTCAGCTCGATGAGTTCATTGTACAAACGACGCCGCTCTGC
ACACTCCGCCGTGTACTTCTTCATCAAGCCGTCAAACCTTGGTGCACACTCCTCGGCACA
CTTTGCCACCTGCTGTTTATACCTCTCCATCAGGATGTTGTGCTTATCCATCAGGATGTT
GTACCTCCCACCTACAGGTACAAGACCAAATGTCAGTGATTCTGCAAGAAATTAAGCGAA
TATGTTTCACCATCCATCCTTAGGAACTGGAGGTGTGTATGATGCTTGACTGTGTACCTA
GGAACTGGAGGGCAGCAGGGCAGTCGGGAGTTGCGATCCCCTTCAGCCGCGGAGATGGGA
TAAGACAATCATCTGCTTGATCCCCAAATTCCTGAAAGAAGAATTCTAGAAATCATTGGC
ACAGAACACAAACAATGGGGCAGATATAAAGAAGGGAACGCTCAGGATTCATAAATGTTA
GGAGCTAAGAAATTCACGAGATCTGAGCGCAAGAATCCAAAATTCCCCACCTCCAAGAAG
CTGCGGAGAGCCTCCCCTTCTCCTCCTGCAACAGCCGCCTCCGCCTCCACAACCCCCTCC
TCAACGGCGGGCTGTTCCTCCACCACCTCCTCAACGGCGGGCTGTTCCTCCACCACCTCC
TCGCTGGCCAGCACCGCTTCCTCGCCTGACACTGTGGACAAATCCCGCATCGTCAAGACG
GATAGCCCCAAACCCTAGCCCTGAATTGCTTGCAAACAGGAACAAGGAGCCTACCTTCGG
GATGCTGGGGCACCGGCGCAGCGGACGCGGGCGACGGCTGCGGCGCAGGGTTCGAATCCG
TATGGCGGCTCGGGCTCCGGTGGTCCACGGACTCCACGGCGCAGAGCTCTTCCTCGCCTG
CCAAAAGAAAACCCTCGCCATGAGACAAATCAAGCGAACCCAACACCTCGGTATCACCCC
ACCACCGAACCCCAGATCCGCGCGTGCGTACCTTGTCGCGGCTGCCGTAACGGAGACGTC
GGCGGCGGCGAGGGGGAGGAGGCGTCCGGATCCGCTCCCATCGCCGTGATCTGGGGCCGG
AGCGGGAGGAGCGGAGATCTTCGGGTCGGGGAACCGGGGGGTTCGGGGACGGAGATCGGA
GGGGGAGACGAGATTGGGGAAGGAGACGAGAGAGAGAGGGGGGAATGTGAGATTTGGGCA
GCGGCGGATTCGATTTTTGAACTTGTAGAGGTTTGGGATTGGGGCTGGTTACTGCTGAGA
CGACCGTTGGGGATGGGATGGGATTTTATTGTTGGCACAGCCACCTCGCCCTCTCTTGCT
CTCGCTTTGACGAAAAAGAAAAAACTGTGGACTCGAATGGATAACTCCCTCGGTAAGACT
AACTTTAATGGGCGACTCATTTCGTCCGGGTAAACGTTTTCCTTCGACGCGTCAACGAAA
GTAACACGCCGGTTGCTCGTTGTCCATGCGTCTCACGCACGGGTGCGACCGCGATCGTTT
AAATTTGCTACAACCGACGTACAAATTTATTACATTTGTTCACTAAAAAGTTGCATATAC
ATTTGGTTGCAACCTCAGTTAATCGAATTTTTTGCTATAACCGGCATCATTTTTTGCTGC
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCAGAGTTGCAACCCGAGTTCACC