Contig Data
morexGenes
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Map Locations of contig_46294 (3723 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46294

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62206 1 799 bp MLOC_62206.1 Available Available LOC_Os06g11310.1, FRAME:+2, EVALUE:6e-77, 13106.m01224 protein plastocyanin-like domain containing protein, putative, expressed
MLOC_62205 2 3629 bp MLOC_62205.2 Available Available LOC_Os02g26890.1, FRAME:+1, EVALUE:3e-179, 13102.m02923 protein PPR repeat containing protein





CDS Structure of MLOC_62206






CDS Structure of MLOC_62205






Contig Sequence (3723 bp)

>contig_46294 3723 assembly3_WGSMorex_rbca.fasta
CGCGCCTCATCGCCTCCTCGCACACCGGGCAGCGCGCGCTCGACCTCTTCAACGCCGCCG
CGGAGCAGCGCGGGTTCTCGCACACCGCGGCCACCTTCTCCGCGCTGCTCATCCGCCTCG
CGCGCGCCCGCCTCCCGTCCGCCACCACCGCCGTGCTCCGCCGCGCCGCCTCCGCGCCCT
GCCGCTTCCTCGAGCCGCACCTCCTGCCGCTCCTCCGCCTCCTGCCCCCCGACCACTCCC
TCACGCTCCTCCGCCTCCTGCCGTCGCTCCTTCGCCGCCGCCGCGTCTCGCACAAGGCCC
TCGCCGTATGCCTCGACCGCCTCGTCTCCTCCCGCTGCCCCGACGTCCTCGCCGACCTCA
TAGCCGACCTGCGGGACCTGCGGAACAAGTACCTTCCCGCCCCCAACACCTGCGTCTACA
ACATCCTCATCAAGCACTATGTCAAGAACGGCGACTCCGAGACCGCCTTCAGGGTGCTCG
ATGAAATGCGTGAGTACACCTGCGGCGATGTGAGGCCAAACCTGGTCACCTATTCCACCT
TGTTGGGTGGGCTCTGTCGTGCTGGTAAGATGAAGGAAGCGTTTGAGCTGTTTGAGGGGA
TGATCGAGAAAGATCACATCGTGCCGGACCAGCTGACATACAATGTGATCATCGACGGGT
TCTGCCGGCTGGGGCAGGTGGAGAAGGCACGGACAATCTTTGGGTTTATGAGGAAGAATG
AGTGCGAGCCAAATGCTTTCAACTATGCAACTCTTATAAATGGACACTGCAAGAAAGGGG
ATGTGGAGAATGCAAAGCTGGTGTTCGAGGAGATGAGGAGTGCTGGGGTGGAACCAGACG
CCGTCAGCTACACGGCACTGATCGGGTGCCTTTGTAGACATGGGAGCGTCGATGAGGGGA
TCGATCTTGTGATGGAGATGAGGGAGAAGGGATGCAAGGCTGATGTTGTCACATACAATC
TGCTGCTTGAAGGGCTGTGCAAAGATGGGCGGATGGCGGAAGTGATGGACTTGCTTGGGA
GGTTGCCAGAGGAAGGAGTTCAGTTGAACGTCGCAAGCTATAGGATTGTGATGAATACTC
TATGCTCAAGTGGAGATATGGAGAAGGCCGTTGGCTTGCTCGGATTAATGCTCGGACGAG
GGTTTTTGCCGCACTATGCGGCCTCAAACAAACTGTTGATTGGTCTGTGCGATGTTGGGC
GAGTGGCAGATGCGACAGCCGCATTGTATGGATTGGCCAAATTTGGGTTCATGCCAGAGG
CTAGTTGTTGGGCCAAGCTGATTGAGGCTGTGTGCCGGGACAGGAAACTTAGGAGATCTG
TTGAGCTTTTGGATATCTTGATTACGGGAGGGTGAAGAAGTGAACTCAGCGCAGCATGGG
TTACTTTGCCTGATTTTTTTAGCTCAAGGAGAATGCAAGTCAGGTATGAAGATCGCCAAA
AAATGGAGTTATGGCACATTGAAAGAATCACTATCACATAAGATGATCAGGCATGACCCC
AGATGACAAACAAGATGCAGTCCAGGGAATAACTCAAGGGCGGTGTGCTCTGGAGCAGGA
GCCTGTTTGCAATCAGACTTCAACTAGGCTGCCGCCGACCTGAGCCAACTTGGGATACAG
TCCGCAGCCATCCATTCTAAGTTTGTGGTGGGGGCAACATTTGATGGTGGGCACAGAACA
TTGCTTACTTTGATGTTTGTTCCCGTGTCCGTGATAAAAATAATTTGCATTATCTCTGTC
CGAGGAAACTGAAGATGCAATAACCATGTGGAAGACAGGTGCTCATTCCCCTTATTCATC
GGTGTGTTTTTCTACTCTTGTGGAAGAAATTTAGCCGGCTTGCTTCTCACCGATCTTCAG
ATCACTGAAACCAACTTTATGAATTGCATCCACTGTATCTCTCTCTCTATATATAGTTCT
CGTGGTATCATTATGTGCACTCTTCACCGAGAATGTTCTCACCCATATATCTGGTTTTTA
TTGTTGTAAATGCCAGTTATGAGGCAGATAATTATGTGTATCATGGATAATTTTCCCTTG
GCTGGCTTCATAATATTGATTTCAGAAATGAGTCAAACAAGAGATTGACACAACAGCTAC
TCATGGACTAACAATCCCTCATTTCGCATTACATACTCCCTTGATTTGTAGCAACACACG
CCACCGTTATGATAAATAGCGTACAGGCAACACAGTTACACAACACGACACATATGAATG
CAACAATTGTGATAACTTACAAGCAGCAAGTATAACAAATGATTTGAGACAGAATAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGCATGCAGAAGGAGGCGGCGAAGGCCG
CGGACGCCATGGAACCACCGGGGGGCTGTGAGAAGGGGCGGTCAGTCGTCGCGGCAGACG
GAGCTCTTGGGCTTGACGACGAACTTCATGAGGCCGGTTGTGCAGTGGACGCCTTGGCGC
TCGCCGCAGACGAAGTAGTGCATCTTGCGCTTCTTGAGCACGAACTCGAAGCCCGCACCG
GAGCCCTGCGCCACGCCGGCCACCAGCTTGCCCGCCTTGATGTTGCACGACTGGTAGTCG
GCGAGGTTCCGCATCAGGTACACGCTGTGCGCGTGCGTCGTCGCGTTCGGCGGGTCGTAC
GTGAACACTGCATGCACGCCCACCATCCACACACTGAACCTTTAGCAACCTCAGTGAAAT
AGTAATAGCTTCGTTGTTTTTCAAAGCCTGGTGTTGCAGTTAGTTTTTTTCTTCTTTCTT
ATTTGCAGTTAGCTAGTGTGCGCCAGATATGGCAACCACCCAGCGTGCAAAAATAGTTTT
TTTTTCTTTTTATTATCAGAGGGAACCAAGACTGAACTAAGATAAGATAAGAGCAGTAAT
CGTGTGTGTACCAAGGGTGTCGTCCTGGAAGAAGGGTCCCTTCCTGATGACCCAGTCGGT
GTAGTTGTACCCCCACGTCCACCGCGCCGCGTCGCCGACGACGAACCGCTCCGCCCGGCA
CGCCTCCGGGACGAGCACCATCGCCAGCAGCACGAGCACCGCCGCCGTTGCCCCCACCCT
CGCCTCCATCTCTCAACCACAAACAAGCTAGCACTCGTTCAGCTCGCCGGCCACTGGATG
ATGCCCTGGCTGGTCTGGTTTGCTGTGATGAGCATGCCATGGCATGGCTTGGCTATAAAT
AGGTCCGGACGGGCCGGTCGGTCGATCATGGCGTTGCGTGGGAGTGCAGCACGGGGGCGC
GTGATGATGGCGCCAGTTGACTCTTGTAGCTGAGCCGAGGGTTCCGTCAGCTCGATCGAC
AGAGGCTGGGAGAATTGGAGGCGTTCTCTTCTTCTCGGGTCATTGTTTACTTGTCTGGGC
CACACGATTAGAAAAGTTGGGCGTTGCACTGAGCTAGGGTCGCGTTTGGGGTTGGTCGAT
CGACGGCAACGTTGGTGCGCCATTAGCGACCTGGGCGTGCGTGCTTAGTGGCGCGGCGTG
TCTTTGGGGGTTGGTGGACGCCACTGGCCCTGGCCGTGTGGAACTTGGTGGTAACATCTA
GGTTAGCTACTGTCCACTTTGATATGCATTGGCATCTCTGGTCACTTCTACGGAGCTGCC
CCCGTAGCCGTGTGCATGGTCATCAGCGTAGCCATGATTATTACGGTGGTGGGTAATAAA
TTCGTATAGCATACGATATAAGAAGTTATACGAAGAAAACGAACGACAACGCAAAGCACA
TGG