Map Locations of contig_46271 (10406 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46271

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62183 4 2488 bp MLOC_62183.3 Available Available LOC_Os05g30970.1, FRAME:-3, EVALUE:0.0, 13105.m03178 protein copine, putative, expressed





CDS Structure of MLOC_62183






Contig Sequence (10406 bp)

>contig_46271 10406 assembly3_WGSMorex_rbca.fasta
CGTAAAACTGTGTTATGTTTGTTTGAATTTGAACTTATTTGTGAGAACTTATGTCAAATG
CGAGAATTGAGCGTTTTCTGTTTTCGTATCGACGCGGCGGTGTCCGAACAGACCCTGCAA
AAGCCGACCCGTATAAAAGCATATTCGGCGAATATACTTTTATATGGGTTCGTTTAGGGG
TCTGCATCTGCGGCCGTCCGAGCTAGCCCGTAAAAACGGTTTTTCCCGAACTGCAAACGC
GTTTTATAGGCCGACGGGATTTGGGGTCTGGTAGAGTTGCTCTAATGACCCTCGGGTGTT
TTTGCTTGAAGGTGACTGTGAAAGTAACTCACCAACCATGGGAATGGGAACGGGAATGAA
CAAGGACAGACAGGCAGAAGCGCGCCAATTGGAACTATCCCTCTCAGTCCTCCTACGGGG
GAGCTGGCATGTCACTCTCTTCTCAATCCACCTTCTTTTTAAGAGAGAGAGAGAGAGGGG
TGGGAAATTCTTGACCCGTCTGATAAAAATGGCAGCTGCGCATGAATGGTGTTGGGTGTA
TTCAGGGACTAAATTGCTAGGCGCACCAATCTTGTCGAGTGCTGCTACGTAGCTGCAGGT
GCAGGGCCAGTTATTGCCCGATGAAAGCTCAATGTGCGGTGCAGATAAACATTCTACAGA
AAATACCAGTGCTGTCCATTCTTGCTCGGATGAGATGAGTATAATATAGGAAATGAAGAA
GATCTTCTGGGCAGCATAGTAAAAAATGCAAAAGTAAAAAAGGGAAGGGAGGAACCTTCT
CTTTCATCAACCGGGAAAAGAAAGAGAAAAGCGACATGCATGGCTATGGTGCCACTATCA
ATCAGAATGATCATTATGTGCGTTGCTTTGGCATGTGTGTTAGAAAAAGGAAAAGATAGT
GATGTCTAGTAGGGGGCCGAGTTTCCTGAAATGATCGGTCTTGGGCATCACTGTCTAGGG
AGAATTCATACCGAAACCAACATCCGGTGAAAGACCGATGAAAGTCAGAAAAAAATGTTT
TAATTTTTAAAAAATCTTTAAAGAATATGGGATGTTAAGAGGACGATGTTCTATGACTAT
GCAAAATTTTAAGTTCAAACGCATTACATGATGTGAGTTATCGAAATAACAAAATCAGCA
TTGAATAGTGCCAAAAAGTAACATCATTATTCAAGCTGAATTTGTTTTTTTCGTAGCTCG
CGTTTTTTAATGTGTTTTAACTTAAAATTTTGCGTGGCGATAAAACATCATCTTCTTAAC
ATCCCGTATTTTTTCAAAACTTTTTAAACGTCGTTTTCACAAAGTTTTTTTTTTAAAATA
TTGGTTTCTCTATGATATTATTCCGTCTGTCATAGAGAGCTTGTCTCCCTTTGAATAGAT
GGTAGTAAAAACATACTCCCCTCCTCATCAGAAATATAAGACTAAATATTTTCTTAAGTC
GGATGTACATAAAATTTTGTGTCGTGTTTGTTCACTCATTTCGAAGAGGGTATTGAAATA
TCAAATTCCTAAGTCGGATGTAGTTCATATTGAAATATCAAAAACATGTTATATTTATGA
ACTCGGAGAGAGTATTAAAATAAAAGAAGAAGAAGAAGAGGAGGAGATTCATGGTAAGCC
CTTTGGGCGTACTAGCTCGATCTGGTTTCGCAGTTAGCATATAGAGAAAGAATGTTCCAG
CACGTCGCTTTGGCTTCCAGGCTTTCGTTCTCGTGCTTCAGGAAAGCGCGAATTCAACCA
GTACTACCAAAGTTATACGGGACTCTGTAGCGGGCAGGTAATGGCGAAATTCATGATGAT
GATGATCACGGTAACACGCAGTACGGTCCGACGCCAACGGAAATCCCTCTGCGTTGATCC
AGTTTATTAATTGATAAATTTAACTCGGCGAGGGAGAGAAAGAGAGAGAGAGAGAGAGAC
AAGGTGGTATCGCACGGGGGAGGCGCGCTGGCGGAAGGAAGCCGCTCCAGCGCATTCCGG
TTGTTGGGAAGGAAGGGGGAGGAGCAGATAGATTCTTATACTCGGGCGGGACAGGCAGGA
TGGAATGGACCGGCTGGCGCCTGGCGGGCGGGCTCACCGGTAATTGCTACGGACTGGAGC
AGGAGTAGTACCAACATGTGCCCGCCAGCTCTAGGCTGGCGTCCAGTGCGGCCACATGCC
GCATGCCATGCCATGCCGGTTGGCCAGCAACTAGCTACTGCTAGCCAGCCAGCCATAGCA
AGCACGGTCAACTCATAACCACCACCGATTTGATGCTACTACATTCCCTTCCGCATCACC
CACTGAATTGATTATACTTCCTCATGGAATACAACTAGCATGTGTGTGATTTCTCTCTCT
CTCTTCAGAAGCGGCCACCTTCATGACAATTGTGCGTTATTTTGTTATCTTAGTAGTATT
AGATAGAGGATAATAATACCGAGATCGTTGGATCTCAGCCCACCTTATGATACGACGGCT
GCCCGGCCCTACGAGAAACCAAGAGCTTTGTTGCATGGAATTGCCATCTCATTTTCCATA
CGTAGTGTTTGCATAGCACATAGCAGCAGCAGTTCAGTGAGAGAAACACAAGGAGGCATC
TCATTTTCCATACGTAGTGTTTGCAGCGACGTCCTAAACCTGGGTGGAAAACCTATCGTC
GGGGTTCAGTACCTATTAGTCAGACAGATAGACGGGAGAATCTACAATTGCCAGCTGGTA
CGTAGGCGCAGCCCAGCTCGTGGGGGTGGGGTGGCGGGGTTCCTTCACAGCTGGGGAGGA
GGAGGGGGGTAGGCTGGCGGCGCCGAGGCGTGCTGGGGCGGCCGCGGCTTCATGTCCCGG
CTGCGCATGTACTCCAGGAACTGCCCGGGCAGCTCCTCCAGCAGGCTCTGGACAACCGTC
ACCTGCCCACCTGCTGATAAAAACGTCGTCCATAAGTCACGCTTGTTTCGGCGGTTGTAC
GTACTATACATGAGCAAAGAGCTGGAGTAAGTGATGGTGAAGGATGCGAAACTGATGCTC
ACCTTGGACTTCCCTCATGGGGACGAACTGGACGATGTCACGCGTCGCCACCCTGCCCGT
TGAGCTCTCAAGCCGCTTGCCGTTGTCCGCATCCAGGATCTGACAAAGCCAAGGAGAATT
GTCAGGTAAATGTTACTGCTACTTCGGTGACGACAGAAATAAAGATCACGGAGCAGCATG
TTCGGCGGCCTTTGTTGTTTATCAGGCAAACTACGTACATGTGATCACACCAGAGCAAAC
TTTCTGGTAGGTGCAAGTGCATGCCTGTGGCTTCGTTGGGCGCATGGCACTACAGATGCA
ATTAAAAAGTGCAGCACAGACTGCCGGACTACAACTAAAGCTACTAAAGAAATAGCCAGA
TGCCAAGGCACAACATGTAACAGCGCAGCCTCCAAAAGAAAACGAGGTAAACAATGTCCA
GCATGTAACAGCACATTCAAGACAGATGACGAGAAGAATGTTCAGAGGATGAAATATTCA
TCACGTATTCAGTAAATGATTTACCCTCATTTGAGTGAAATCAGCATTCCCGACTCCCAC
GATGAGAATCGACAACGGCAAGTCTGATGCCCTTACAATAGAATCTTTTGTTTCTTGCTC
GTCCGTGATAACTCCATCCTGCACAGTGCATACAATGCTCGGGTAAGTATTTTGAACAGA
GGTCACATGAGTATATATGATTACATACCGTGATAATGAGCAGGACAAAATATTTGTTGT
TTCCATATTGCACAGAATGGCTGGCAATTTCTGCAGCTTTGCTGATCACCGGCCCAAACA
AGGTTGGCCCCGCGAGAGAAACACTGTAAAGTGTAGAGGAGTACGCTGACATGATGCCTT
CAACTCCAACGACCTGTGATAGGAACAGAAAAATCTCTAAACATCAACCACGGTCTAAGA
AATCCAGGTGCCCTCAGCCGGTAAATATAAAAGATCTACCATCAGTTATCCTATAGGCTG
CTCTTATTTTTTGGCAATATTCAGCAACATTTCAGGAACAATACCACACATCATTTGTAG
CACCATATTTGCCGTCACAATAATTAAAGAGGATGAGACAGGGCAAGCATGATATGGCCA
TATCACTATTTTCTATTTTGTAATTAATGAGATTCATGAGTCCAACAGGAATCTAGGTTC
TTAGTCATCAATATCTGCACACAAACATTTGTAAGGAAGCCAAAAACAGTAGATGCAGCT
GAACACAATTTGGTTTGCAGCACTACATTCTCGTGTGTGAAGCATTAGTTGTTCAGTTAA
TACTACTGAAAAAGCAAAACAAGAAACAAACAAACCTTGTAAGCTCAAAAAAAGTTCAGT
CTTACGGTATACAAATATTCAAGAGTTGGTTTATAGAGGATTTTTTTTTTGATATCACCC
ATTGTCAAAAAATAATTAAATAAAACTGAGAGTAGCTCATCAGGCATGAATCTCACCTCA
CAGTCATTGGTGCTTGCATTCAAGTTGAAACAGTGGGATACAGATCCTCGTGGTATCTTT
GCACCAAAACCCCATGCAGGGAATCGTCTATCATTGTCATAAAACTGTAGAACTTCGCTG
GCCCCAAAAATTGCCTGGTACATCAAATGGTTCAATAAGAAGGCTTTCAATTTACGGAAT
ATCTTAGCAGCGTCAAATTCCAAACCTGCTGGTATGAGTTTGGTCTGCCAGAGGGGTCAA
TGTAGTGCAAAGACTGTGGTGCACGAGGGTCACCATTTGACGCTGGAAACACATGGAACA
ATAACCACAAATAAGCAACAGATGATTGACAGAGCTATGGATAAATCATTTAAGCTTGCA
ATTAGAACTTACCAGTAAAATCTACAGCCACCATAAAATTGAGCTCAAACCCGCTGGAAA
TATAGTCCAAGAAAGTATGTTGAACTTTTTCCTGGAACTTATCCAAGAACAACTGTCCTT
TCAACTGAACACAGATTGGTTACGTCGAGAGGTTAGATGGAGTAATTTTTTGTTAATTAC
TGTGTCATATAGTTGAAATCTAACCTTCTTTTGTCCCTTGTGGCTGTAAAAATTTGATCC
AGCCTTTGAGTTATATAGATTTTCAAGCTGAGCGATAGTTGTCTGGAGAGCCCTATTTGT
CAGAAAAATAACAAAAATAATTAAACTCAGGATCAATGGCAAAAGATGCCAGAATACTTC
CTCACCCAACCTACCCAATAAGTTCGTGGTTGCCACTGGCATCAAAATCAAAACACTCGA
CTAGCAGTGGGTCATCCTGAAATAAAGTCACATATTAGAAGAAGAAACTTATATTAACCT
TGAATTACACATGTGTTAAAAAAGTCCGACACAAAAGTTCATATACTAGAAAAATGTTAC
TTGCCTTGCTACTGTACTGCTGTGATGTCAGTCTTATAGGCCTCCAAACAGGGTTTAAAT
TGTTCTTGATCACTTCTGTTTTACATATAGGAATGGCAACAGCACTTTCTGACAGTCTTG
ATACTCTCAAGAAGGGATCCTGCACAATAAAAACCAATTATTTAGAACTGTAATTAATTT
GCCACCTTATAACTACCAAGGGAGTTATCCATACACTTTTGGAGAACATGTCTTTGTTAT
CCAGGTTCAGGCAGTGGAATTGCATCTCAACTGCCATCCTTGATGAAGCAGTTTCTTCCG
CATGTACTGTCACTGTGCCCTGAAGGGCATGTCCAGAACCATTCCGGAGGTTCAAAGTCA
GGCTATGGTTGAACTTTGTGACTATCTGTGAAAAGAGCAAAGAGGTGCAAAATAAATATA
AGGAGAGTGCATTTGTGTGTCTCTCTTCTTCATTTGCATTTATTTAGAGAAATTATATAC
TGCAGCTGGATTATGCATTATATCATATAACTGATTTTGCACAACCTCAGACAAATTGCA
GAATGCTTCCCCTAGAAAATCTTGCTGAGCCAAGTTCAACATCTGCATAATACAAATGAT
TCAGGCTTCAATAGTTGCATAGTAATAGATTATAAATTCTAAGCAGGCTATAATGTTGCT
GTCTTGTGTCAGTCACTGAAGGTAAAAGATAGCCCACGGAAAACTTACATTTTCTGCGCA
ATGAAACAGGTAAGACAACTGTACCATCATCTCATCACCCAGATTATTTTGACCAAACAT
TGACAACTGTGAAAATTCTACCGCTTGTTTTGAGCACTCATTGACTGTATGTGCACAGTA
TTTATGCAAATTTTCATACCTTTCATCTTTTGACCCGATGTTAAATTATGCAGGGGCGAA
AAAATGAGCAAACAAACAACAGCTAGCATGCTACATGTGTGTGGAAAAAAGAATGAGGCC
CTAAACGTGTAATCTGGCTACTATATGTCTAACACAGTTACCCAGTACATTAGTTTAGGA
GGGTTAACTCTTTGATGAGCAAATATGCATCACACTGTAGTACTTTTTGGTAGAAAACAT
TGTACTGAAGTTCTTCAGCACTTTACTTGGCACCTTCACTATGTTTTAACACATTGGCCC
TTTTCTCCTGCATGACTGCCTTGTCTTGTACTGACCACAAACCTCTTTTTAAAAATTATT
ATTTTATATTAGCAGGAAAAGTTATAGAATTTACACACTAAATGTAGCCATAAGAAAATA
ACAAAGAACAGTGAAATAAAACAAGAAAGCATGTCTTGATTTGAAGCATGGCTATATTAA
GCACTCAAACTGAATTTGGGTGAAGCAAAAAACATTAATTAAGGGCATAGAATATACCTT
CGGTGGTGTGTTATGGTACTTTGTGTCAACGTCATATATCCTGAACCTATCATGAGTCCA
AAAAGAGGTAGCAGTAAGTATGAGCTTTCTATAAGTAATCAGTATGTATACAGTTTTATA
AACTTACACGAGCGGTTGCACAATCTCAAATTGGTAATTTATCATAGCTTTTGTGATCCA
CAATGGTTCCAGTGAATTCGATATCACTTCAGTGCGGCCAATCTCTTCTAGCCTTCCATT
CATTTTTGAGTAAACCACCAACATAGGATCACTCTGCACCAAGCAGAGTTATAGCTGAGG
AGGATACATACACATACACAAGAAAAGCAACCAAGCAGAATTAAGCACCATAATTTTCTG
TTACACACTTTGTTGTAAAAGATTTTGTACACTACAATGAAAACTTCGACAGTAGGATGC
ATGTTTCAAGTGTAGCTGGTGCAAAGGAAACGTACCTAAACACAATGATTGACTATGAAT
AGATTGGAAATGCAACGATCTTTGATGTACAAACAGATATCAAACTATAAACTGAAAAGG
AGAGCAACGTATCTTGAAAATGAGCATGCCGCTTTCCGGGATGGTGGTTTCATGTTTCAA
CTATTCAAAATGTAAGCCATCTTCTTGTTAGCTAAAACTGAATATTAGCTTGCATTGTTG
TTCTTTACATATAACTTATAGGGCCAAAACAGAAATTTATTTCTGTTTGTCTTATGTATA
ACAACTTTGATCATAAAACTACAAGGACAACAAATGCCAATTTGAAACTTCCAATATTGT
TCATGCACACCTTTTTTGGTCTAAAAAAGGTGAAAAAGGTACAATAAGAGGGTAAACAAA
TGACATGTGGATACAGAATCACAAATTTGCACCTGTTCATACATAATAACATATAGTTTT
CTTTTTTTAAAACTTGTCATTTTTTAGCAAAAAGCCAAAGGATATCCAACATTGAGCAGC
GTCTACTTCAGTTCCAACAGGGTTTAATATCACTTTTTAAGTTAGGGTACGGTAAGATGC
ACTACAGGAAAGGGAATATAAATATACGTAGAGATCGAAATGCATGGAAGGACTGGATGG
TATTTTTTACCTTAGAAAGAGCATCCATATTTCTCAACTTGGAAGCTGAAAAAGATAGCT
GCAATGCAGGAAGATGGCGACATGTCAATCAAGGCAGATCATATTGACATCCACTATCGG
CTAGTTGAGAACATATTAGCATGCAGCACCGACGTACACCGAACAGGGTTCTACATTATC
GCTGGCTGGAACATATCTGACCATATGGTATCCTTGAACATGCATTGAAAACATTATAAA
TATTCTAACAGATGAACTCTAAAATATGAAACAAGAGACCACACAGTTCCTGTACCCATT
GTCACAAATCATCATAAATCATGATACATAGGTGTCGCACAACTCACTGCAAGCACATCG
ATCCTTGTGAATCTGAAGACATAGAATTATATTGTCTGAACAACATTTTTTAATTGAAAG
GGGTCGAGTAAATCATAATAAAAAGGACAGACCCAGTGCACAGAAGCTCCCACACAAGGT
GGGATCTGGGAAGGATTATAGGAACCTAGTCCAGAATAAAACAAAATAAATTGTTTGGTA
GTATAGGACATAAAGTTCATCGTCCAGTGTGTGAACGTTAGTGCGACTCACTAGTCTCTA
CACGAGATGGTTCCATTTTTAAAGCAAACGATTGATGTCCACCACCCACTCCAACCTAAA
ATATCTTTGACCATTTCTGATCCACTTCCAGAAAATACTCCAGCGTCAAAATGTTAATCA
ATATTAAAAAAATGTTTTCCAGAGACCGGTCCATCAAATTCTATGCGATCAGCAACTGAG
GAACCGCATGCGGAAACTGAAAAACATTACTTCGTCACTTTCTTCAGGATCTTATTTGTG
CACGAACAGGTCACCTAGAACTCGTATGCCATTTTGTAAATGAACACGCATGCATTTGAA
GCAAAAAAAAAAAGAAAAAAAATTCAAAACGGAGGGAACAGTGCTGGAGGTGCGCTAGCG
CCGCACATCCGAGTTGACTCTGACAGAGACGAATTTCCCAAGCACTTCTATGAGAACTCA
TATATACTCGTAAGAGTAAAGGACACGTCACATGATAGTACTGAGCAATCTTCGTGGACG
CAGACCAGCGGACAAAAAACGCACCAAAACCTAAATACGCAATCCACATATTATCCCTAA
CTAAAACAACCCAAGACCCAAATTCAGAGACGAGCGCCGGCATTTCACAAAACCCGCTTC
AAACCCAAACTCTCGAGTAAAATACCCCTAAGTTGTGCGCGTGCAGATAAAAAGTGGTAC
TATCCAGACCAAAGTCAAAGCGACAATTGCAATGCCGATGGGTTTGGTGGGAAACATCGA
AGCATCTGCACGTTGTGACAGCGGAGCGCATTTACTCAAATAAACAAATAAATGACGGGA
CACCCGAAACCCGCCTCGCTTGACAGCGAGAGCCCACCAGATTCCAGCCGCCGGAACCGA
TCGCGATTCGCGACGACCCCCGAATTCCTTCTTCCCCATCCAAAAACCCCCCCGCCTCCA
ACCGTGACCACGAATCCGCGAACCATGCCGTTCTGGGAAAGTCTCCGCGACCAGCGAGCA
GCGCTGGACTGGGCACTAGGGTTTCCCGTGGAGGGGAGGGGAGGGGAGGGGAGCGAGCGT
ACCTCGAGAGGGGTGTAGAGGCGCAGCGCCTGGCCCTGGAAGAAGTGGTCGACGGCCTCG
TTGGCCCCCGCCGCCGGCGGCCCGCGGGACGGCGCGCCCACGCTGCCGCCGCCTCCGACG
GCCTCCATGCCGCCGCGCACGTCGCCGGAGAAGCAGCCCCCCATCCCCGATCTCGGACCT
GGAGCGGCCGGAGGAGTTTGAGTTTGAACTTTGAAACGAGTGGACTTGTTTGAGAGCTGA
GGGGGCGGAGAGACAGAGAGAGAGGGAGGGAGAGCGCGTTCGTTCGCAAATCCTGTCTCT
AGAAAACAATATTTGTAGGCGTTTTTACGCGCACAAGAGTCGAGAGTCGAGACGGGCACG
ATGTTTTGGTCGAAGAAGAGGCCCACGCGTCTGTGCCTTGCCATGTTCCATTTTTGGAAA
CCAAGAGCTGCCGTTAGTTGCCTGATGGTTTTCCAAAAGGAAAAAAAGGCCCTGTTCTTC
GGCACGCGGCAGCGCGGTGCACGGGAAAATGCTGAGAATCAAATCTGAGATCGCCGGGAT
ACTTCGTGGAACAGAAGGGGCCTCATACGCGGTTCCGGATAACGGGAGAGCTGATCGATT
GATCAGATGAAGCGACTCGAGCACATTAGGGCCGCGGGCATTATCCCGCATTACGGATGG
CCTTTTTTTCTTCTTCTAACCAATGAAGAGTGAAGTTTGTTTTAAACCTTGAATTTGTAT
AGCTTGTTGTAATCAAACCTCAACCTCGAAATACACGTCCTCTACTCATTGATTCTGGTA
AATTTTAACCTTGGACCTGTTTGGTGTGTCGGGGTAAAATCCATCCCAGCCCGGATTGCG
ATCTACGCTCAGTGACATCCGTATCCCCACATGTCATATACATCTTCTTTCCCCAGCCCC
TTCTCTATCGTTATCCTAAGTGTCGGTCCTCATCGAGCACCTCCCCACCTCCACGGGCGG
CTGAGCTGTTGGGGAACGTCGCATGG