morexGenes - Barley RNA-seq Database

Contig contig_46192
Source Contig contig_46192
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_46192 (8234 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_46192

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_62099	1	2006 bp	MLOC_62099.1	Available	Available	LOC_Os02g09200.1, FRAME:+2, EVALUE:0.0, 13102.m01011 protein cytochrome P450 71D10, putative, expressed
MLOC_62100	1	159 bp	None	Available	Available	None
CDS Structure of MLOC_62099

CDS Structure of MLOC_62100

Contig Sequence (8234 bp)

>contig_46192 8234 assembly3_WGSMorex_rbca.fasta
GATAAAAAACGATTATCATGAACAAATAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGGGCATATTTCCAACAGGTAGCACGTCGGCTGACATCTCCCTCGCGTGTTTCCTGGTCC
CTCCGGACGACGAGGCACCGGCCACCTGCGTGGCGTTGAGACCGATGGGTGTGCGCAGGG
GTGGAAGGAGCCACCACGCTCACCTATGGTGAGCATTCCCCACAGAGTCGGGAGGCCTGC
GGGTAGACATGGAAGCCTGGGATCGAGTGAGTCGTCGACCCGTGCGGCGGATCCGGTAGC
ACCAACCATGGGAACGCGGACGAGCCGGTGCTGGCCGCGGCCACGGCAGAGGCGACGAGC
CCGTAATGGCCACGGTTTAACCCTAGGTGTAAAAGGGACTCCCTCGTTACCACAGAGACA
CAGGCGTTTGTGGCCTCCTGCTGCGCGGCGATGGACGCAACTTCTTACCTTGCATCCGTC
ACATGCCTCTGGTCCGTCCTCTTGGCCGACTTCACGGCCTGCTCCTCCGGCGTCAACTTC
TTCTTGGGCGGCGTTGTGGTCTTGCGAGGGGCACGGGGCTCGCCTTTGCCGAAGGGGCGT
AGGAGGCGAGGCCAGAGGAAGCTAGGGAGGCGAGGCCGGCGACAGCATCGTGTGAGCGTC
TTCAATGGCGCGCGCGGGCGGTAGCTTTCTGGAAATTGGAGGGAAATGGTGCCTACGAGC
GGGCAAAGGGACTTGTCGCCGCGCGTCGCGTGCGTCCGCCTCGTGTCCACGCCGCCGCAA
ATGAGATGCTTCGGCACGGCACGTGAACGAAAAGAAGACGTGTGTCCATTTGGGTCTGCA
GGTTGGGTCGACTTTTGTGTCTAGGCCAACCAAAACGGACACGCGCGGGCAAAATGGATC
GGGGTGTTGGAGTTGCTCTTAGTTAAGAAAAAAAAGGGATCTTTTTTTAAAAGGCGTGCT
TTATTATTTTAAAAAAAAGTTTAAGCATTACATCTGGCCTCTACATAACTAATATGCACT
CAGCCAACAAAGTCCTCGTTCCAAGCAAAAATAAAAAAAGAAGGTGAAATACAACGAAAC
TAAGTTCTGTATAGCGCCTAAATCATAGGTGATCCCATGGGTAAAACTATTATTTGTCCC
GGCCTCCAATCATATACACATCTTCGTAATAAAGTCTTGATTCTTCACTTGTTATAGAGA
AAATCATAAACGAAGCGTCCCGATACATCTGTAGTTAACCTGCATAAGAGAAGTACTTTT
ATCATTAAAGACCTTATCATTTCTACATAACCAAAGCGATCAAATCAAGACAAGTCCTCC
CACACTGAAAAGAATTCTGAACGTGTGATCAATCTCGTGTAGCCAGTTGCCAAAGATATC
AGCAACATTACATGAAGGATACAAGCCAAAAACAATGTGGATGACTGGCCATATAAAACA
AACTAATTTACATGAAAAAATAAATTTTTATTTTCTCATCAAACGGACAAAAGACACATT
TCATGCAAAAAAATAGAATCTGGCCATTTCTTCTTTAAGAACAAGCACCTATAAATGACC
TTCTCTCATGACAAAAGGGCGTTTATAGGTGCTTGTTCTTGAAAAAGCACCTTAGGCCAA
CTCCAAACGTCCCCAAACATTTGTTCATATTTTGCCCGTTTGGGTCAGACAAATGGACTA
TATATATATATACAAAAGAAAATAAAATTGAATTGAAATTTAGATGTTGGCAGCGACCAT
GGTTTTCATGCCGGCGAGAGCGCCAACGGCTGGCACTCCATGCGAGCCTAAAAAATGATG
ACCTCCATAGTTTCATGCCGGCAAACAAATGCAATCGGCCGACACACATGTCAACACATA
AAAGGACCAAAGTTCATGTCTAGCGCCCCCTAGTTCATGTTGACACACATAACTCGCATA
CAAAGTGACGTTGCTCCCCGCTATAGCTCAATCATCTACATCGAGCATCTCATTTTGCTT
CTTCTCGAAGACTTACTATGATTCTTATGAAATAAATGAGACACATATTACTATGAAAAG
AAAAATAAACATGGATTTTATTGTTGTCTTAATCGGTACTCCGTGTGTACCTAAATAATT
ATAGTGGGGAGAACTACTGCAAAGGGACGGGCTTGGCTAGGGAGCAGAACCCCTAGCCGC
TGTCGTCAAGAGAGCCAACCTTTCGATGGCTCTGCTCCGCCGGCGACCTTTCGGTCGTCG
GTCATGAGGGGGTCACTGGATCATTCGCGTGTGAATCGTTTGTGCTTTAGGTTTTAGGGT
CCTAGTAGCTTAGGTTTTTGTATCGTCAAATGTCTTGTCTTCGGCGGCGGCGACGACAAT
GCTAAATAAAGAAGCTCCAGATTCTACTCCGACGAGGCGATCGTATCTATGGTCGGTGAT
GGATTTGGGAACTGGTCTGTTCAAGTGGGGATATCGTGGCGGCGACGACATCCGTGTGGT
GGACTTATGTCCTCGGGATCCGCCGGTGCGACGGCGTCTGCTCCAGCGTCGGCATGGAGC
TTGCGAGGTAGTCCAGGAGCGAATGCAGATTATGGTTTGCATTGACGACATCTGGAAGAC
GAAACATGTGTTGGGTTCGTGGTTGATGGATGACAGATATGATTTCCTCCTTCGACGTCT
TAGTCGTGATGGGATGTTAGATCTGGAGTTCGATGACGTGTTCGGAGTGTTGCCCTGGTC
TGATTCGTTCAACAACAATGGCTTCACTTTTGCTGAGCCACCTTAAAGATTCGCAAAGCT
GCATATCAGCGACAGAGCTACATCAAGCTCGAGTGAGGAGGTGATATGTCATTTGTTTCT
TTGATAACCGTTCTAGCGGTGTCGGAGACTGATGACGGACGTTGGTGTCAAGCTCAGCGG
TATTCTGTTATCAGTTTTGGCATGTTAGTCATTACGTGACTTGTAATTTGATCCTTATAT
TATAAATGAGACACGTATTACCGTATAAAAAATAGCTCTTATATTATAAATGAGACACGT
ATTACCGTATAAAAAATAGCTCTTTTAAGTTATAAGTTTTTTTCTTGCCAAGGTAAGTTA
TAAGTATTTAGATACAAAGGCATCGAACGATATCCCCGCAAGATGCTCAACGTCTACCAC
GCACGTATATTTCTGCAGAAGCTGTACACACCTATCTTTGTGCGGCGAGACGGCATGCGC
CGTCATGCGCACGCATTTCTTCGCTCTTCGCAAATATCTGGATTACCTGGTGCTGGAGAG
ACGGCACCTCGTCATGCTCAGGCCTAAGATACATAGATCTCACCGACTGTAACCACTCGT
TTGTTGTAATTTTGTTACGTTTACCAACAATCACTGCTGCATCTCGTACGTATCGACACC
CACCGTTCATTCGCTCTCGCATCAGAAAATGTTTAGCCACAGCTAGACAACACTCGTGTT
CTCCGTTCAAATTACTAACCTCTTTTGTACTCCATCACAAAAGTGATAAGACGAGGCCTT
CCAGTCACAGGCATACCCATCAGCTCGTCACTCGATCGCGCCCCCGCCATGGAGCAATGG
GCGTGCTACCTCTGCCTCTTCCTGGCTATCCTCCTCCCTCTCCTGCTCCTCAAGCTCAAT
CTCAACAGGAACCCTGGTGGCGTGCGCCTGCCACCCGGTCCGTGGCGGCTGCCGGTCATC
GGCAGCCTGCACCACCTTGCCGGCAACCCGCTCGTGCACCGTGTCATGGCCGACCTTGCG
CGCCGGCTGGACGCCCCGCTCATGTACCTCAAGCTCGGCGAGGTGCCGGTGGTGGTGGCC
ACGTCCCCGGAGGCCGCCCGCGAGATCATGCGGACGCACGACGTCGTCTTCGCCACGCGA
CCATGGAGCCCCACCGTGAAGATCATGAACGCCGACGGGCAAGGGCTGATATTCGCGCGC
TACGGTGCCCTGTGGAGGCAGCTCCGCAAGATCTGCATCCTCGAGCTTCTCAGCCCGCGC
CGCGTGCAGTCGTTCCGCCGCATCCGGGAGGACGAGGTCGGCCGCCTCGTGGCCGCCGTC
GCCGCGGCGCCGCCCGGGGAGCCCGTGAACGTGAGCGAGCGGATCGCCGTGCTCATCACC
GATTCGGCGGTGCGCGCCATGATCGGGGACAGGTTCAAGAGGCGGGAGGAGTTCTTGGAG
ACGCTCGACGAAGGGGTCAAGCTCGTCGCCGGGTTCAACCTCGGCGACCTCTTCCCGTCG
TCCCGGCTCGCCAGCTTCATCAGCGGCACGGCGCGGCTGGCCGAGGAGAACCACCGCAAG
AGCTTCGAGCTCATGGAGTACGCGATCCAGCAGCACGAGCAGCAGAGAGCCGCCGCCTCG
TCGAACGGCGACGTGGAGGAAGGAGGAGAGGACCTAGTGGACACGCTCTTGAGGATACGC
AAGGAAGGTGGCCTCGACGTGCCTCTTACCATGGGCATGATCAAAGCAGTTATACTTGTA
AGTGCACCAGCTCCTTTGTTTCATAGTAGTAATTCTTTGCCCTCTATGCATTTTATCTTC
TTCGGTTCACTCTGAATCTAAGAATTGTTACATGTTATACTCCCTATTATCCTAGGATTT
GCAGCCAGATGTCTCACTAAACTGCCATATGAGTGACAATCCGAAACTGCCATGAACAAC
TAGCAATCACTAAACTCTGTAAATCGTCATACTGCAGGATCTATTTGGTGCCGGGAGTGA
GACGTCGGCTACCACACTTCAATGGGCCATGTCGGAGCTCATGAGATACCCAAACGTGAT
GCTGAAAGCACAAGCTGAAGTACGCAACAATCTCCAAGGGAAGTCTAAGGTGACCGAGGA
TGACTTGGCCAATCTCAAGTACCTCAGACTCGTCATCAAGGAGACAATGAGGTTGCATCC
AGCTGCGCCATTGCTTCTCCCTAGAGAGGCCATGGAGGCTTGCAAAATCCTCGGGTACGA
CATACCCGAGGGCACAACGGTTTTGGTGAACGCGTGGGCGATCGGTAGGGACCCTAAGTA
TTGGCAAGATCCTGAGGAGTTCAAGCCGGAGAGGTTTGAGTCTGGGATGGTCGACTTCAA
AGGCACAAACTTCGAGTACATCCCGTTCGGAGCAGGCAGGAGAATGTGTCCTGGGATGAC
ATTTGCGCAGGCCAGCATGGAGATTGTGCTCGCCTCACTCCTCTACCACTTTGACTGGGA
GCTCCCAAGTGGGGTTAAGCCAGATGGGCTAGACATGACCGAGGAGATGGGCCTCACCGT
CCGGCGAAAGAACGACTTGTACCTGCACGCCATGGTCCATGTGCCCTTGATTTGATGTAC
ACTTGCATTGTCATGTCATATGGCATATGTGACTGCTAGTTCTAACATAGTAGTGTATTC
TATGGGCCCTCGTCGAATGTGGATGCATATGAAACTATTAGTGATTTTTTCCATGTACGT
GTGTCGGTGTGTGACTGGTAGAGTTTTCTACCAAAGCAAGTGAACGCCCCCGGCCTGTTC
AAGTGACTGAGAGGTACGCTGTTGATTAATTTGGGATCCTCAAACTTCTTCGGCCCTCTT
ATTTTCGGCCTTCTTTTGATTTGCTCTCTTTTGTAGAACTACGAAGTGGTCCATGTGCCC
TTGGTTTGATTTACACTTTTATTAATTAGTATGTCATATGTCGTATGTGACTGTGAAGTC
TCACATTGTAGTGTCTTCTATGTGCCTGGGTCGAATGCGGAGGTGTATGAAAGAACTATT
AGTAACTATGTTTGAAATGGTTTGGGAGAGGATGGAGTGGTGACTCATGTTTACAAGGAG
ATAGAAAAGAAATAGGAGGAGTGTGTGAAAGGAAGAAGGGAATCTGTTGGAGAGGGGGAA
AAGGAGAGGACTGTGCATTGGCAGCCTCCGTCAGGAGGGCCACCGGGAGAAACGAGAGCC
ATTAGTTGGAACTGTCGTGGAATGCTCTCCACAGAAGTTCGAGAGCTCCTCGAGCTCCAA
GATCAGACTTATGCGGATTTAGTCTTTCTTTCAGAGTCACATTTGAATAAAAATAAAGTT
CACGAGTTACATTGTAGTTTAGGTTTTTCCATGTCTTTTTATGAGAGTGATGAGTCTGAT
GGTGATGAGGACATGGCTACATTACATATGATCACAACATATGCGCATTTATTTGAGATG
ATTAATAAAAGTTATGCAATAATTTATTTATGCTATTACATAACAAAAGTACTTCACCTC
TTTTTGTTTGATGCCTAATTGTAGAACTATCAGACACTTGTACAATCCACATATGAAGAT
AAGGGAAAAGAGACGTCTAGATGTTGTGGAAGAAGTTCTCTCACGTCACTTTTGGCCCAA
GAGAAGATAGAATCCAAGTCTCGTACTTCACCTCTTTTTGTTTAATGCCTAATTGCAGAA
CTACTGGACACTTGTACAATCCACATATGAAGATAAGGGAAAAGAGACGTCAAGGTGTTG
TTCAAGAAGTTCTCTCACGTCATTTTTTGCCCAAGAGAAGATAGAATCCAAGTCTCGAAC
TTTACCTCTTTTCGTTTCATGCCTAATTGCGGAACTACTGGACACTTGTACAATCCACAT
ATAAAGATAAGGGAAAAAGAGACGTTTATGTGTTGTTCAAGAAGTTCTCTCGCGTCACTT
TTGGCCCAAGAGAATATATAATCCAAGTCTCGTACTTTACCTCTTTTTGTTTCATGCCTA
ATTGCGGAACTATCGGACACTTGTACAATCCACATATGAAGATAAGGGGAAAATAGACGT
TTAGGTGTTGTTCAAGAAGTTCTCTCACGTCACTTTTGACCCAAGAGAAGATAGAGTCTA
AGTCTCGAACTTTACCTCTTTTTGTTTCATGCCTAATTGTGGAACTACTGGACACTTGTA
CAATCCACATATGAAGATAAGGGAAAAAGAGACGTTTAGGTGTTGTTCAAGAAGTTCTCT
CACGTCACTTTTGGCCCAAGAGAATATATAATCAAAGTCTCATACTTTACCTCTTTTTGT
TTCATGCCTAATTGCGGAACTATCGGACACTTGTACAATCCACATATGAAGATAAGGGGA
AAATAGACGTTTAGGTGTTGTTTAAGAAGTTCTCTCATGTTACTTTTGACCCAAGAGAAG
ATAGAGTCCAAGTCTCTCACGTTCTCGACTCAAATTCAGATTGCACAGACACACCTCTCT
TAAAATGCCAACAACTTTTGCATACGAACTCTGAATTGGGTGATTCTTTTTTTATTGGGA
AGTAGATTTCATATGTTTTCCATACTAATTGGATTCACCTTTAAATTCGACTGGAGTATG
GAGATATTGATGAAACAAACTGGCGTTGTAGCAGAATCCGAGCCAAATTATAAGTCTAAA
GATGTGACATCACCTCCACTTGGGCTCATGGGTCCTCTACGACCTAGGGTTAGTATTAGG
CTGCCTTGGGACGTCCTCTCGTCTCCTTGGCCGCCACATCTCTTTTCCTTTATCTTCGTA
TGTGGATTGTACAAGTGCTCGGCAGTTCTGCAATTAGGCATGAAATAAAAAAAAGGTGAA
GTACTTTTATTCTGTCTGTGCAGTCTATATCTGCGTCCAAAACGTGAGAGACTTGTACTC
TATCTTTTCTTGGGCCAAAAGTGACGTGAGAGAACTTCTTGAACAACACATAAACGTCTC
TTTTTCCCTTATCTTCATATGTGGATTATACAAGTGTCTAGTAGTTCTGCAATTAGAATT
AGGCATGAAACAAAAAGAGGTGAAGTATTTTTATTCTGTATAGCATAAATAAATTATTGC
ATAACTTTTATCAGAAATCACCTCAAATAAATGTGTATATGCAATATTTGCGATCATATC
CAATGTAGCCATGTCCTCATCGTCCTCCCCTTCTTGAAAACAAAGTTGTCCTCGGCGTTG
CTTAATCTGAAACATGGCTAACGAAAGAGACAAAGTGTACATGATGTATATGTATGTCAT
TCAATTTTGCTTCCCTTGGTTTTTGCACATATGACACATGTATACATGAGTAGCTTTCAT
ATGTTATGAAATATAAAGCAAAAATATTACAACTTTCACAAGAAGTAGAAGGCATGAAAA
TAATGCAACCCAGCTTGCACATATAAGTGAAGCCCTTATTCATATCAAACGATTAACAAT
GTTCATCATTAAACCATCCCAACATTGGTAAATAAACTTTAATTGCTTCAAACTTACATG
CTACAACATTCTTAAATAAGAAAACATGCAACAAGTCATTTGACACAGAATCATCACCAA
GATTAAAGGTCATA