| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_46179
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62083 |
1 |
987 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_62083
Contig Sequence (5123 bp)
>contig_46179 5123 assembly3_WGSMorex_rbca.fasta
GCTGTGACGCGAGTTCCAAAGATTCACAATCTCCAAATTATAATTCTCGAAGACCACTTC
GACGTAGCCTCTCAGATGCGCGAACATCACACCATCACGAAGAGCCAGAGCTTCTGCGAT
GAGAGGATCGGTGATTCCCGAGTAAGGTTTGCACCAAGCAGCTACGAAGGAGGATCGGGT
TCTCGCTACCCCATGAGCTCCACCCCTTCTAGCTTCCATAGCAATGCTGCCATCCATGTT
GATCTTGAACCAGCCCTCGTCCGGTGGGCGCCAGCCATGGCCCGGGAGAATCCGAGCATG
ACCCCGAGGTAACTCAAGAACAGCTAGAGGCTCTCGAGTCTTTTGCGTAGACAAAACAGG
ATCAAGCTCTCGCTTGTCTTGTGTAGCATTGTTCCTCGAGGTCCATATTGCCCACATGAC
AGTTACCAATTTTGCTCTCTGAGAATCCAAGAACCTGTGATCGCGAAGCATGTCCCGAGA
CTAGGTGAGCGGGTACAACTCCGGCCGCTTGATGTCAAGCCAGTTCGGCGCGGCACTCCA
AAACGCCTGTCATGGGTGTGGTCCAATAAGGCGTGCTTCATATCTTCCTCCGCTTGAAGG
CAGAGTTTGCAAGTGCCAACAGTAGTAATCTGACGGTACTTGAGAGTAGCTTCCACCGGA
AGAAACCCATGCAGAACCCGCCACCACAACACTCTCACCCTTAACAAAGCCTTGAGCTTC
CATAACCGGGACCATAGTTGTTTGTCTGTCAATGAAGTTTCGGTGATCGTCCCTTTCTAT
AGAGCTTTATGCTCGTTATGAGTCATTAGAGCATGATACATTGATCTTACAGTATAGCAG
CCCGATCATTCGAGAGCCCAAGCAAACACATCATCGCCTCCACCCCATCTTAACGGAGTG
TTAAGAACGGCATCCGAATCGGGGGTGATGAAGCTTTGTCGAATTACGTATGATTTCCAA
GACCAATTATCAGCATCGATGAGGTCTGAAACTGTGTGCAGCTGTGCATTTCCGCTTGTG
ACTATGGGTGACATGGAGATAGTGCCAAGGATCCACTTATCATCCCAGGTAGAAAGGGTC
CTGCCATCTCCAATACGCTTTATGAGGCCGACTTGCAGAGCATCTCTCTCAGTGATGATC
GCACGCCACGTTGCCGAGGAGGAACGTGGAGGTGCAGCTTGCATGAAATCACTGAAGGGA
AAATATCTACCTTCGAGAACTCGGGTGCAAAGGGAGTTTGGATGTGTCATCAATCGCCAT
CCATGTTTTCCAAGAAGAGCTATGTTAAACAGCTCGAGCTTCCGGAATCCCATGCCACCC
TTCTCTTTCGGAATTGTCATCACATCCTAGGCCTTCCAATGCATGGAGTTCCGATCTAGG
GAGCTACTCCACCAATATTTAGCCAAGCAGAAAACAAGACCCTTACACACCTACTTTGTT
AGCTTGAAACAACTCATGCTGAAAGTAGGTATGGCATGGACCATAAATTTTATGGCATGG
ACCATAAATTTTATGGCATGGACAATAGATTTTATAGAACTTCCCTACCAGCACAAAAAC
CCATCCTTTCGGACCCACCTTGGAGCTTGCTTCGAATCCTCTCTTTCATGTGGTCGAAAG
TACCGCTTGTGATCCTATCCACGGCAGTAGGTACACCGAGATAACGTTCGCTGAAGGCCT
CAACAAAGATGTTCAGAGTTTGTTTCAGCAACAACTTGTCCGAATCCGAGTTATTCGGGC
TAAAGAAGACATAACTTTTATCTTTGTTAACAGCCTGTCCCGAGCCCCTTTCATGTATTG
TCAGACACATTTATTCATTTAGATTTGCAATACTTATGTCATATTTAGATGTGTCCTAGA
CACATTTAATTTTGAGAAAAGATAACGTCCACACATGTGGGCGTTTGCAAAACCCCACGC
ACATGGATCTGTGTCCGTTTATGGTTGTATTAATCTTGGTAATTTTTGACAGTTTTTTTA
TGCCACGTAGGAAGGGCCTGATGTGTGGGCGTTTATCATCTGTTTCGCACACACAAAGCT
CGCGGCTGCCACCCCGACGTGTGGTGGAACTGGCGTCGCGCCCACACGCTCGCATTCCTG
TTAGTTGCCATGTCTTCTGAATGTTACATAACAACCGAGTGGAACTGGTCGTGCCCGTAT
GCGTTTCAGTTACCATGTCTTTTTTATGTTACATGACAACTGAATGAAACTATCACACGG
AAACACGCGGGACCGCATGACAGGACGGACGTGCGGGTCCCAAGGACAGAAGGCCGGACG
TATTGACGTTAGCTGTTTTGCCTACACGCACACATATAAGCTATTTCCTTACACACCACA
CGACACGTGTACGATATATATGGGCGATCCCAAATTTTTATTTTGGTTGTGTCTTCAAGA
CAGAATTGATGGGTGCTCGGGCCTAGCTACATGTACACGTGGCGCATGGCTATTGGGGTG
CGAGATGGAACGTGGAGTAGTCTAGTAGTAAGCAGGACACGTACGCGAGCACGGAGAACC
GTCGACCTCACACATGGATGCATGCACCGCCGTTGCATGCGTGCATGCGCCACGTCGGCA
CGTCCTCGACAGACACGTGTGCATGCAGGTAGCTAGCTAGAAACCTCTGCATTCCATTCC
ATGTGGATCGGATCGGCCATGGCGGCTCCGGCCATCTGCATGCTACTTATTTATACCTGC
TCCATCGACCATGCATGGCAGATGATATCAACTCCATCTCTTGCAGCTTGATCAGTTGGA
GAACCAGAGTAGTAGGACGACGCATGGCTTCATCGGCGGCGAGTCAGCAGCAGGCGGCAG
GGAGCATGATGGCGCGGGTGGACCGGCTGGACCTAGTGGTGGCGTACCTGGAGGAGGGGA
TGCGCCACCACAGCGGCAGGTCGTCGACCACCGCGACCAGCACGCTGTCCTCGTCGTCGT
CCCCGACCACGCCTCGGTCTTGCCGGCCTCACGGGTGCCGGCCGGCGGAGGAGCTGCTGA
GGGAGGCCGAGGCCAAGGGCAGCCTCGTGGACCGCATCGCGTTCCTGGAGGACCGGGTGC
TCCGCATGGAGGAGGAGCGCGTGGAGTTGCTGTCGTCGAGCATGACCACGCCGACCTCGT
CGGGGAAGAGGAGGACGATGAGGATGATGATGAACGGCGGCGGCGGCGGCGGCGAGGCTG
GGGACGGGAGGAAGGGGAAGAAGGGGCTCAAGAGCCTGGTCAAGTCGTGCGTCCGAGCAG
GCGCCAAGATCAAGACCAAGACCAAGGAATAGCCATCATATCAAGTTTTCTTTGTCGGAT
GAGTCATCAAGTTTCTAGTACGGTCTAGTCGTGTGCGCGCACACATTTGTATATGTTGGC
GTGGCGTGTACGTAGGACGTACACCCTGTACAATACACGTGCCTGTAAAAACAGGACAAC
ATGTTGTGAGTGAGTGTACACCTTTTTATATATATATACTTGTCCATGTATATATTGTGG
TAGACTTTTCTTCTTACAGCTTGGTCATCTGTAGATGCTGAGAGGGGGGAATTTGATGCT
GCAAAGGTGGAATATATGGTGGAGTCTCCTGACAATGCTATAGAAGTGGAGGTGATTCCT
ATTCCTCCCTTGGCTACTGAGAAAAATTTGAGATTTAGTCTCCGTAACGTGCAAAGCAAG
ATGGAGGAGGATGTGCAGTTGAAGGCTGCTGCTGTCTTTGATGCTTTGTCCAATCAAAAC
ATGATGTTAGCTGCTTCTAAGATGGGGGTTATTATTCCTGATAATGATTTTGTTAATATT
GATATTATTAGAGAATTGGAGAAATTTAGGAATAATAATTCTAGGATGGAAAGAGAGAAT
GTAGTGAAAGTTGAGGAGAATATAAGTAATATGTCTCTGATCAATGCTAATGGGGTAGTT
ACTCCTTTAGATTTGGGTTGGATGGAAGAAGACAATATTGAAGAGCATGATTTTACACTT
GTGAGGTCTAGAAAAAAGAATAGAATTAAAAAACCTGTTGTTGTAGCTAGACCTGTTACT
AGAAGTCAGAAGAATGATGCATCCTTGGATAAGAAAGTGGGTGCCCCTACTGTGATTCCT
ATTAAGGGTCCCAGAGAGAGAAAAAATTCAAAAGGAATTATATGAAAGGGGTCTTTTGGA
ATTGTAGGGGAGCAGGTATGAAAGGGATGGCCTCCTGTTTTGCAGACATTATTAAAGATC
ATTCTCTTGATTTTGTTGGTATTCAAGAGACCAAGAAAAAGGAGTTTCCTGCAAAATACC
TAAGTAGAGTGGATCCTGGTGGTTTCTTTGTGTGGAACTGTTTGCCTTCGGTGGGGATAT
CGGGGGTATCATTTGTGAGATTAAGAAAGAGAGCCTGGAGTTGATTTCTTGAAAGATGGG
GAACTTTATGGTGCAGGCTCGTGTTTTTTATGTGAAGAACAAATGTGTTTGGGTGTTAAT
TGTGGTTTATGGTGCGGCGCATGATGACCGCAAAGAGGATTTCCTGGATGAAATGCTTGT
CACATGTACTAGTGTTGATGTCCCTTACATTATTGGGGGAGACTTTAATATCATTAGAGG
GATGCAAGATAAAAATAAAAAACATGGTAATGTCAAGTTTGTTGCGAAGTTTAATGATGT
TATTCATTCCGTGGGACTGAGAGAGGTTGATATGGAAGGAGGGAAGTATACGTGGACTAA
TAAACAATGTCATCCTACTTTGGAGAAATTGGACAGGGTTTTAATGAGCTTTAGCTGGGA
AGATCTATATCCTTTAGTTTCTGTCCGCAAGCTGGTTAGGGAGGTGTCTGATCATAACCA
CTTGTTGTTGTCAACAGGGATGGATGAGAGGAGTGCTCATGTGCACAGGGAATTTAGATT
TGAGCTTTACTCGCTTAAGAATGAAGAATTTTTTCCTAAGGCCAAGAGCATCTGGGAACA
AGTCGTTAGGGCAGATGATCCTATTGATATTCTTAATATAAAATTAAAGCGTATTAAGAA
ATATTTTAAAGGGTGGGGATCAAACAAGTTTGGTCATAGTAGNNNNAGGAAGGATGAGAT
TAAGAAAGAATTGAAAGAGATTGAGAAGTTGGAGGAGATGGGACCTTTGGATCCTGAAAT
TTATGAAAAAAGAACTTTGTTGT
