Contig Data
morexGenes
Links



Map Locations of contig_46175 (4288 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46175

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_62076 2 1680 bp AK354972 Available Available None





CDS Structure of MLOC_62076






Contig Sequence (4288 bp)

>contig_46175 4288 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGCGAGCCCATCCCACGGGCCCTCGTCCATTCGCACGCCGCACCTCTTCA
CAGCAGACCTCACTCTCAGATTCACAAGCAGCGGCATCTCCATCACCGCCGCCGTCGCCG
CCGCCGCCCTCGCCTCCTCCCGTCCCCGTGCACGCCCACGGTCTCGCCGTCCCTGCGCCT
CCCTCCCCGCGGCCCGGTCCTTCTTCCTAGGTATGCAAGCACTCACGCACGCACGCTGCA
TCCCCGACGGTTAATGGCTGATTACGCACGATGTGCCATGATTCCGCTGGATCCAACTCA
ATGTCCGCGACGATTTTTTTTCCTTCCATGCGACGATCTTGCTCGCAGCATGACCAGAAG
AAAGCAATTTCCGCTGCCCATTCATCGCGATACATGCTGCTCACTTGATGTTCGTCATGT
GTTAGTATCTGTCTGTCCGTCTGTCTGCAGTGGCATATCACTAGCAGCATATCCATGTCC
GCGTTCTGGGATGCATACATACCGAGGCAGTGGCGTAGCAGTATACGCATGCATGTGCAG
ATCTTAGATGAATGTGAATACATCATACAGCGGCGAAAGCAGAGGCAGTGGATTAGCAGT
GCCTGCATCTACATGTTTTAGATTTATATTTCTATACTTGGTGAAAGCAGAGGCAGTGGC
AAGAATTGTTCTCTTGGTGCACCCCTCAAACTCAGCCGAACGCCGTTTCACAGTGGCGTG
CCATGCTTTATAGTAATACGCTCATGTCTTCTGAGATCAGGCTTTGCTTTGAATTCACAT
GAGAAATGCAGGCCATGTTTCAATCTACACTGGTTATAAAAACTACAACCCCGCATTACA
ACGCCACCGATTCCTAACGCGGTTTGTTATTCCGCATGATCCTGTTGTAAGCATTATTGG
GGGTTCATAGCAGCCTGACCGGGTGTCTCAACTCAATTAGAATTTCACAAGTCTTTGTAC
CTGTTCCCCCTCTCTGCATCTTACCTTTATGCTGATTCCTCTGCTGGGCCAGCTCCGGAA
ATGGGTCTCCTCAGCATCATCAGAAAAATCAAGCGCAAGGAAAAGGAGATGCGTATTCTC
ATGGTGTAAGCGTCCTGCTCCATTCCTTTTTCGCCTTCTTATTTTACCCCCAGATTCCTC
CTATCCAAACGCATTATTATTCTTGGTTCCTTGCTTGATATGTGTGCTTCTTGACTTTCA
ACGTTTGTGCCTTTCAGTTCTTTGTTAATTGTTATTCTTGATTGATTTATTTTACCCATG
TCAAATTTACAGCGGCCTGGACAACTCGGGTAAGACGACAATTGTGCTCAAGATAAATGG
GGAGGACACCAGTGTCATCAGCCCTACTCTTGGCTTTAATATCAAAACCATCCAGTACCA
AAAGTATGTACTATATTCATTTTCATTTATCAAGTTAATTATGCCAGAAATCGAAAGGTT
GTTCCAAGCTGATGTTATACTTAATCATTCCAACTCTGTATCATGTCTAGCAAAATGCCA
GTGGTATTAACTAAAGGTGTTCTGGGAAATCCTTTGTAATTTTAGGTTGATCGTTCGAAT
TTTATGGTATATCTACAAGATGGCACCTGTATTAACTCAGGGCGTTTAGGAGATTTCATG
GTAATTTTAGCACATCGAATAACTAATTAACTACGCATGTGCCACTAGATAGTATCGCTT
TGCTATGCTAGATCACCTCCCCTGACTGTCGCAAGTATGCCATAGATTCTGTCAAGTCAA
GGGCGCCCTTACTCTTTGTAGTTGCATAAGGTAATTACTGGAACAATCTTGTAATCTGAG
CTTGTTGTTTGGAGGTTTAGTGATTAAGCAATACAATTTCAACAGCTTTAGATAATCTCA
TTCGAATTACTGCTTGGTGGAGAGAATTGTTGTGTGCTGCTTCAGCTAAAATTGACTGAA
GGTGGTCCAGTAGTATTCGAGCTGTGCAGTTAGGTTCTTAGGGAAAAGCGAAGACAGGGA
GACGTCCATAGATATGTTTCAGAATTTTGTGAGTCATATTGCTCCACAACCACAAGCATC
AAAGTCTACTTTGGCATCAATGTTTTAAGTGGGAATACCAGAGGACAATATTAAAATTCG
ACACTGGTGCGGTGCAGTTTTAATTATTTCTGGTCAGAAAATACAGAGTAGGACAACTGT
GACACTAAATGGTACAATCAGGCGATATGATGGTCTACGCCAGTCATTAGCATCTGTTGT
TATTCAGCCTACTATGAAGCAAGTTGCGCCTACATCGGTGGTTGTACTTTTAGCATTCAA
AGTAGGAAATGAAATTGCTAATCTGCATTAATCTGAGAAAGTAGTAAATCACATTGGTGA
AAATACAACATATTTTGGCCCAAATTTCAGCCAGGGTATGTTGTTTTTCAGCCTGCTACG
AAGCAAGCTGCGCCTACGTAGGTGGTTGTACCTTTACCATTCAAAGTAGGGAATGCAATT
GATAATCTGCTTTAATCTGAGAAAGTAGCAAATCAATTGGTGAAAATACAACATATTTGG
GCTGAAATTTTAACAGCGTCGTGATGCCCATCGCTCATTGATCATGGTGGTCAGACGCAT
GAGCACAGTCATGGGAACAGCAGAACAAACTACCAAGAATTGATAGTTTTATGATCGTGG
CAGGTACTCGCTCAACATATGGGATGTCGGGGGCCAGAAGACCATCCGTTCGTATTGGAG
GAACTACTTCGAGCAGACTGACGGTCTAGTTTGGGTGGTGGATAGTTCCGACGTCCGGAG
GCTCGACGATTGCCGTGCTGAGCTCCACAATCTTTTGAAAGAAGAGGTAAATCGCCTCGT
GAACACCACTGGTCGTCTGCTTCAGCGTTGAAATTTTGCTCCGGGTTACTTTGTTGAAAA
CTAGCAGTTGCTGTTTAGCATCGGGAAACTCCTGGGACTGGAAATTTGATTGAACCTAGC
ATGTTTGTGCTTAAATTTATGTGCTATCTTGTTCGACTATTGGAGCGATGCTTGAATTAT
TGGTTGCAGAGACTGGCTGGATCGTCGCTGTTAGTTTTCGCAAATAAGCAGGACATTCAG
GGCGCTTTGAAGCCTGACGAAATCGCCAATGTAAAAACACACCGTCGCATCATGCCCATC
ATCATCTTGTGATCTCCGCTTTTAAGGAAGAAAGACTTGAAGTGATGTGTTTATTATTGT
AGTTGTGTCTCCGAGTTTGATGGGTTTTTGGATCCAGGTTCTGAATCTTGAAGTGATGAA
CAAGGACCGGCACTGGAAGATCGTCGGGTGCAGCGCCTACACCGGCGACGGCCTGCTCCA
GGGCTTCGACTGGCTGGTCCAGGACATCGCCTCCCGCATCTACGTCCTCGACTGATCTCA
AACATCCACCCAACTCCGGGCATTTTAGCCCGTATGAACTACTGTTTTTTTTTTGGTTAC
ACAGCCATAAGGGCATGCTGCTGCTGATGTTGATTCTGCTTTGTGCATCTCGTGTACTAA
TATGTATGTAAAATCTGATGATCAAGTTTGAACCAAACCATAGATGATGTCATTTTTGTT
GTGCAACTCCATGTGTAAAGTACAAGTTTTGCATCCTACATGCACGGAACATCAGAATCA
CTGAAGATATTTCGCACTTGCTTGCAGATAAGCTCTGTAGATGCGCAAATCACATCAACC
CCCGTATCCGGGCCCTGACTTGCGTGAAAAAACTTTGCAGCAAGTTAAAGATATTACATA
TTTTGCCATCGACTTTTTGCCACTCCTTCCAGATTAGCTCTGCAGGGTTCTGAACGGGAT
TCATCAATTTCATGCGAAAAACTCCGAATTCGCAGAAGGCTTGCGAAAGATGCAAGATTC
AGAAGCAAAGACAAATAAAAGAAACAATGGCAACCAGGACACAACACACAGAGGAGGATA
TTTTTCGCAGCTATGACTTGCATTTTTCTTCATCGATTCAAACCGAGTTCAAACATAGGA
TCACCAACATCACATCCCAATTACAGTCCAAGACAGGAAGAGGGATTGCTGCATCACCGA
CGACAGACCGACCGACTGAAAGATAAGACATGTTGTTTCTTCCTCGCGTAACACAGAGAC
CACTCGAGCTCGCGATCAAAAACACCACAGGACCGGACAGACACACAAACACGACTCAGA
CTGACACACCGAAGATAGATAACTTGCTGACGAAGACGGTAGACGATAGATGGATGGATA
ACTGGGCGATGAGACGGGGTCCGGCGCTCAGGACCTCCACTGGCCGCCGGAGTCGCGTAA
TAACTTCGCATAGCACACATTAAAAGAA