| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_46114
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_62020 |
2 |
1323 bp |
MLOC_62020.1 |
Available |
Available |
LOC_Os08g30100.1, FRAME:+3, EVALUE:4e-118, 13108.m03115 protein 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed |
CDS Structure of MLOC_62020
Contig Sequence (5733 bp)
>contig_46114 5733 assembly3_WGSMorex_rbca.fasta
CGGCGGGGCGTGGCGTGGGAGTGGCCGGAGTCCCGGCCGCGGGCGGAGGGGGTGGAGCCC
TCGATGAGCGCGCGGAGCGCCTTGATGTGGCCGTCGAAGTTCGACATGGCCGGCGGTGGC
GGCCGCCGCCGGAGCCGGAGGGGGAGGGTTCGTCGGCGGCGGCGGCGCCCTTTTCCCTCC
TTAATTTCGAAACGGAATTCGAGAGACTGCTCCCCCTTCCTTTTCTTCGTCGTCTCTCCC
TTTGGAGCGTGGTCGTCGTTTGTGTTGGGCCCAATCTAAAGACAGACGATGGATAGATAT
AACTCGGCCCGGACACAGCTCTGGGCTTTCGGCTGGTCTGAAACTCAAGTTCGGCCCCAA
AAAAGATCTTATCTTTTCCGAGACTCGTCGAAAGGAAATGCATGCCTCTCATAAAAGTAC
AAAAAAAAGGTACACACATTTTTTTGTTTTTGAGAGGCACAGTCATACCTTCGCAAAAAT
AAAACCGTGCCTCGAGGAAGGGAAAAAAGTTTTTTTTCTTTTCAAGCGTAAACAAATCCG
TTCCTCCCGTGAAAGAAAACACGTGATTTTCGACAAAGAAATAAAAAAGAAAAAACATTT
TTTCGTGCAATTTTTTTTTACCAAAGCTAAGGAAGACCGATGAAAAACCAGAAGACCAAA
AAACCCCAAAAAAACACCTAAAAAACCGAAAATGCGTGCGGAAAAAAATCCAAAGAAAAG
ACTAGAATGCAACACATGGCGGCGATAGTGAACACACCAAGTGGCGGCGCCTGAGAGTGA
TCGCTGAAAGGCATCGAAGGAGCGCTCGCCAACTAGTTGCTCCCATGGGCGGGCGCTCCT
ATATCTCGCTTTTAGCGAGACAGCGGTTGCACTCGCATAGGGGCGAACCCTAGACGGGCT
GGGTCAGCGGTGCAGGAGCCACAACCTGTTTTTGTTTTGTTTTGTTTTTCTGTTTTTTCC
TCACTTTCTGTTTTTTTTGTAAAAGAATTATACGTTTTTTTTTTTTTGAAAAGATGAGGA
ATATATATTAAAATATGTTGAACAGGAATTTGAAAAAAGTTGAACAAGCATTTAAAAATG
TTGAATAATTTTTTGAAAAATGTTGAATGAGTATATGCCAAATGTTGAACAAGTATTTTA
AAATATTGAATAATAATTTGAAAAATATTGAACAAGTATTTAAAAATGTTTAATAAATAT
TAAAAATGGTGAACAAGTATTTGAAAAACATTGAAATAGGTATCAAAAAATGTTGAATGT
GTAAATAAAAAACGTTGAACAAGTATTTGAAAATATTGAATAAGTATTAAAAATGCTGAA
CAAGTATTTGAAAAAATGTTGAATAACTATTAAAATGTTGAAAAAGTCTTTGAAAATATT
AAAATAACGTTGGGACAATGTTGAACGTGTATACAAAAAATGTTGATCACTTGTTACAAT
TTGTTTTTTACGTGTACAAAAATGTAGAGTGAAAACAAAGACAAACATAAAAAACACAAA
ATAAAAAGAAATAGAGAAGAAAAAGAAAATCAAACAAAAAAGTACAAAAAAAAGAATGAA
ATAAATCTGAGAAGAAAGGAAAAACAATGAAAAAATGGAGAAGAAAAAAGAAATCAAACA
AAGAAAACGGAAAAGGTAAAAGATAAAATGGAGAATAATGGCTCGGTCGTCTCTAGTAGA
TCTTGATCCTACTGCTAACAAAGTAACAAGAAGTCTGAAGTGGGCGGAGTGGTTAGCCTC
GCTGGTGGGAACACTAGAGACTAGGGTTTGATCCCGGGGTGCCTTATTTTTATTCCCGAT
TTTATGAACTTGGCGGCAATAGAGTCGTCGCTTCGCACAACTAGGTGTCTGACACAGCTG
AACCATGACCGCGAGTGAACTTTCAGAAAAAAGGCTAACTCAAGGGGACTCAAACCATGG
ATATCGTGCTAAAGACGACGCGACGCACCCAACTGAGCTAGCGACTTTTATTGACAAGTT
AACACATCAAAGTTTAAATATACAATGTAGATCCGAAGTATTTTCGGAATTATGAATGCA
ATTTATTTTATAAACTGAGTGTTTTGTGAATTAGAAACACTTATCAAATTTGCATTTTTT
TTGAAAAAAACATTTTCGAAAATCAGGATTTTTTTTAAATCATTAACACTTTTTTGAAAA
TGGGAATATTTTTTTAAATCCTAAACACAAATTTTTGCAAAACACGAACATTTTTTGAAC
AACTGAACAAAAAATCAAAACGTAAACAGTTTCGAGATATTTTGAACAATTTTGAAACGG
TAACATCTTTTGAAACTCCAGAAAAATAAAAAAACGTTAGTACCTTTTAAATTTGTGATT
TTTTTAAACGGTAACATTTTGTGAAATCAATAATATTTTTTGAAATATGAGAAATTTGTA
CTTAGAAAATTTGAAATCCAGAATATCTTTTGAAATATGGCCATGTCTTACAAAATGTTA
ACATTGTACTTAGAAAATGTTAATCAAGCATTTGATAAATGTAAAAATGTGCATTTATTT
TTATGACCATGTATTAGAAAACATTAATCAAGCATTTAAAAAAATTAAAGTGTTTATAGG
AAAAATATTGACCACGTATCCGAAAAATGTTAATGTTGTATTTGAAAGATGTATAGAAGT
GTAGAAAAAAATGTTGACAATGTATTAAGAAAATGTTAAATTTGTATTAAAAAAGTTAAA
CGTGTATTTAAAAATTGTTGTTCACATATATAAAATGTAGAATGAAAACCAAAAGAAACA
AAGGCAGCAAAAAAGTAAAACTGCAATTGAAACAAAATTTAAAAAAACAAAAAAGATAAT
GGAAAATAAAACCGAACAAGAAAATGCAAAAGGAAAGAAAAAAACTAAAGAATGGGAGAA
TAAAAAATAAAAGAAACAAAAGAAAACAAGAAGAAAGCATTCAAAACCAAGAAATGTTAA
AATCATACTAAAAGTTGTTAAAAAGATATGTGGAGAATGTTAAACATGTATTAGAAAACG
TAGAATGAAAACCAAAAGAAGGAAATAAATATAGAACCGAAACAAAAAATAAAGAAGAAA
ACAGAAATAAAACGAAAGAAATAATTGAAAAAACAAATGGGAAAACGGTGAAAACTGATA
AAGAAATGACAAAAATACGTCAAAACAAAGAAAGAAGCAAAGAAAACGACAAAAAAGTAA
AAGAACCAATGAAAATCGAGAAAGAAAGAAATAAAAACAAAGCAAAAGAAAGGCAAAAGG
AAAGAAAAAAAAAACTAGTGAAAAAGAAAAGAAAAACTGAAAACCTGGAAAAACCAATGA
AATACTGGCTCTTTTACCGTCAACTAGGCCACCTTCTAGTGTATACCACGAATTTGCTGT
TGACTCGGTGGCTAGCATGTTGCTACTCATCTAGGAATCGCGAGACTCGGAGTTCCCGTT
TTCCATCTCGCTTTTCTAAAGGCAGGAGGTGCACTAATTGATACATTGAGAACCTTTCGA
TTTGAAGCACGGTGGTTTCAGGAGGAAGGGTGTGAGGATATCATCAGGTCAGCTTGGGAT
AGATGCTTTCAAGACAGAGGGAGTGGTGTCACCCGAGCCCTAGAAAGTGTTGCCAGAGAC
ATAAGCAAATGGAGTAGGATGTCGTGGGGGAGTTAGAAGGGAGGATAAAAAAGGTCCGAG
GCGAACTGGAGAGATGTATAAGAGCTCCGGTTTTCTGAAGCAAAAATAAGGGAGGAAGCA
GAAGTGGGAGGTGCATTGGAGGGCCTAAAGGAGAAGAAGTATACCAATATTTTGCCGTCG
TCGATTGAGCCAGCACACTCTGACGCCGTTAAAATTTTCTATTTCGAAATATGGTTTTTG
CGCGCGCGGCGGTTGGACGTATGTTGGAGATGCTGTGAGCAAGGAGTCCGAGGGAAATAA
TGTAAGGCCAGGGGTCTGCTAACGTACTTTTAAGAGTGCAAGATCGTGAAATTTCACTCT
TGCGACTCTTGAATTTGAAAGTTGGCTGGTTATAGTGATGAGTTTGTTTGGTTTTGAGCA
AATCCAGATGGATAGTAAACGTGTATAGCATTAATCATGAACAATTGGTTATCACGTACG
TACCCATTGCATTCTACGTACGGTGAGTAAAGAGCCACGACTACTTCACTCGCCTCCACA
CAGATTACAAGGATCAGTAGACTAGACTGCAGACGTACGGCACAAGCTCGCTCCAGTAAT
CCATGGCCTCCGACCATCGCCTATACGCTCTCAAGGCCTTCGACGACACCAAGGCCGGCG
TCAAAGGCCTCGTGGACGCGGGCGTCACCGCCGTCCCCGCAATCTTTCACCACCCGCCGG
AATCCCTCAACGACGCACCAACCCATCCCCATGGCCACCAGTTCGCCATCCCGGTCATCG
ACTTAGCCGGCCTCGTGACACCGTCCGGACGGGCCTCCGTGGTCGGCGCGGTGACGGCGG
CCGCGGAGACGGTGGGCTTCTTCCAGGTGGTGAACCACGGCGTGCCAGAGACGGCCATGT
CGGGGATGCTCGCGGCGTTGCGGAGCTTCAACGAGGAGCCGGCGGAGGCAAAGCGGCCGT
ACTACAGCCGGGACCCTGGCCGGCGCGCCAGGTATGATAGCAACTTCGACCTCTTCCAGT
CGCGGGCGGCCAGCTGGCGCGACACCCTCTTCATGGAGATGGCCCCGGAGCCGCCGCCGC
CCGAGGAGATCCCGCCGGCGTGCAGGCGTGTGGCGCCGGAGTACGTGGGGCTAGTGCAAC
GGCTGGGCCGCACGCTCTTCGAGCTGCTGTCGGAGGCGATGGGACTCCGCCGCGGGTACC
TGGAGGAGGAGCAGGAGTGCCTGGATGGGCTGAGCTTCGCCGGCCACTACTACCCTGCGT
GCCCGGAGCCTCACCTGACCCTGGGCGCCACCAGGCACTCCGACTCCAGCTTCCTCACCG
TGCTCCTCCAGGACGCGGTCGGTGGCCTGCAGGTGCTAGTCAACGACGACGACGACAAGC
AGCCTGCGTGGGTGGACGTGCCGGCGGTGGCCGGAGCGCTGGTGGTGAACGTGGGGGACT
ACCTGCAGCTCATGTCCAACGACAGGTTCAAGAGCGTGGAGCACCGCGTGGTGGCCAAGA
GCGTGGGGCCGAGGGTCTCCGTAGCCTGCTTCTTCCGGGTGGACGCGTCGACGAAGGTGC
TCGCGCCGATCGTCGCTGACGCCGGCGGCGCGCGGTACAGGAGCACGACGGTGGCGGAGT
TGGTCCGGCACTACAGGGCCAAGAGCCTGGACGGGGTCCCTGCACTCCAACACGTCAGGA
TCTGAATGAATCTCGCTTTCATCTGCTGTATGAACAAGTGCAAGTGTGCAACGAATAAAT
GAAATGAAGAGACAATTGCTGTTCGGTACATGGATCACCCTGGTAAATACCTGTACAAAG
GAAATATAAGCACGTATATAACCATGTTAATAAGAGCAACTCCAACCGGCCGACCCAAAC
GGACGGTCATTTCGTTCGTTTTTTATCCGTTTGGGTCGGCTCAGCGGACATCAAGGTTTG
CTTTGTCGTTTGGGTGGATGCAAGCCCGATCCATTTTTACCAGCGTAAGAATAAAATATA
AATCATTTCTAAAATAATAAAAAATAAAAAGCATCAATTAAACATTAAAGATGGTCACGA
AGGCCGCCAAGAGTCCATGCATCCCCATTACACTAATTAAACATAAAAAAACCTAAACTA
GGAGGTAGCCCTATGTCACGCCCAAGATGCGAC
