Contig Data
morexGenes
Links



Map Locations of contig_46065 (4981 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_46065

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61980 1 2677 bp MLOC_61980.1 Available Available LOC_Os06g46284.1, FRAME:+3, EVALUE:0.0, 13106.m04886 protein glycosyl hydrolase, family 31, putative, expressed





CDS Structure of MLOC_61980






Contig Sequence (4981 bp)

>contig_46065 4981 assembly3_WGSMorex_rbca.fasta
CCCGCCACGCCCCGCCCCGTCCTACCACGCCCTCACCATACCACCGCCATGTCGCCGGAG
CTCCGTTCAGTCCGCTCGGTCGGTCCGGGACCGGACCGAGATTTTTTCGGTCCTATTTTC
AAGGCCCGGCCCGATCGATTTTTTTACCGAGCCAGGACCGAGTGAGCCCGGACCGAGCGG
GCCACGAGCTGGTCTGAAAGACGGCTCGTGTCGTCCATCCTAAGTTTTGGCCATATTCAT
TAGAAATTATAGTAAGGCGTGTCCGCATGATGAAGATAGAATTTGTGCCGAAGAAGATCT
TCATTCAATGTGAACGGATTTGGAGCAAAAGGACATAACACTACTTTAAACGGGTCCTAA
AGTGCTTTGCCAATTCCGAGGCCGTATTCTTGAGGGATGAACGTGCAATAATCCTGCACC
AACGGATGCTTTATCCAAGTTTTATTTAAATCTTTGAGGATGCCCCCTCTCTCCCTATGT
CCAATCATAATCCCCTATATTGATTTGTCCGTCAAACAGGTAACTAGTCTCCTGTAGGTT
TAGCATTGCGCATCCACCGTGTCTCCAAATATTAATCCTCCAACCTAAGTGAAACGCCCC
AAATCACTATATTTTTTCCAATTATAATAATTAGTAAACGGTTGGGAATGAAAATTTAAA
AAATATATTGTATATCTAAACTAAATGTAAAATCTTAACTGATTTTTTTTCATCCATAAA
TGTAGACAATTGACATCAATTGGGAGAATAAGATACTTTTGCCTTCCCAAAATAATTCAA
TTCTATTTTTTTCCCAAGTCAAACTTCTCTTAAGGCTGGTCATAGTGGGGAGTAACTTAT
ACTGGCGTCATGCATTTGACACAATTCTAAGTTGCTACATTCACATGCAAAGTAACATAA
TAGTAGTGTCATAGATGACTTTGTTTATTAGTTTGTAGACTCATATTCTCTTGATAAGCA
TTATGTTACAGTAACATACTACTCCTCATTAACTACATGTCACATAAATAAATTTGTCTT
GCAATGTGCTATGTTACCAGGTAAGTTACTCCCACTATGACCAGCCTAAGTGACCAAGTT
TATAAAAAATGACTTGGTTCGTAAAAGATCTTATGTGAGTTTTTCTTTCCGCAATTTTGG
TCTATATTTTTGTAAAAATCCTAAGGCATCCTCTATGGACAGTAAAATAAGAAAAATAGG
AAAAAAAATTTAAAAATCGGAAACTTTGCAACATCAAATATGGTCAAACTTTGTAGGTTC
TTGTAAGTTTTCATGCCAAAATATCATGGAGAAAAAACTGTACAAACAAGTTTTAAATTT
CAGTGCTAAAAGTGCTCAAAACTTGAAGCACTGAAATATTTTCCTGTGTAGAGCTCCTCG
GATGATTTTTTTAGCATGAAAAATTGCAAGCTCCTAGAAAGTTTGGTCATATTTGATGTA
GCAAAGTTTCATAACTTTTTGACTTTTTTTCTACGTGTTTTAATTTAATATCCATAGAGG
GTGCCTAGGCACCCGGGTGCTAAAAATCCACTCTCATTTTTAAAAACTTTGTCAATTTTT
GTTGTAGTACAAAGTTAGAATCGTAATTAATTCAAAAGATAGGGAGTGCAATGAGATTGT
AATATACATATGTTGGCATTAATTATTTTCCTTCTTTACAATTATATTCTTTAGTACTCT
TTAATTTAATTCCTCATTTAGATGAAGCGATAAGTCTTAACTTTGAAGTACCTCCTATTA
TAGTCTTATATAATCTTAAGCACACACTCAAAACTTTCTGAACATCCAAGATGATTACAT
GTCTATATAAAGCTACGCCTCCAATATCTGATGGCACTCACTTGTGTGCTGCACCCGTCG
TATCATCTGATGACGATTGTCTCGTCTCTTCTCGCATTCCTCACCATCCTGACATGCCTA
CATTGTTGTGGCGCCGACTATGAAGTCGAGTCGGTCGTCGGGTCAGGGGATTTGCTGTCT
GCCAAGCTGAAACTTGTAGGCGGAACGGCGGAGTTCGGGCCTGATGTCAAGCGGCTTAAC
CTGACTGCAAGGTAAGTGTGTCTGATCTTCATCGATCCTGATTTCGGGGGCTTAATTCTT
GACTTATTTTTCTTCAGAAGAGGAACATTCCTCGCTGTTTTAATCTTGATATGACTGACG
GCAGCCTAGAGACGGAGAACCAGCTCCACGTTCGCATCACCGACGCCGACCATCCGCGAT
GGGAGGTCCCCCAGAACGTCATCCCGCGCCCAGTACCGCCGCCGGAGCACGTCTTGCTCG
ACTCCTCGGGGATGAGCAATGCATCCATGCCAGGCAACAGCACCATGTCCAGCACGTCTT
CAGACCTGACCTTCACCATCCACACCGCCCCGTTCCGCTTCACCGTCTCCCGCCGCTCCA
CCGGCGACGTCCTCTTCGACACCTCCGCCACACTCGTCTTCAAGAACCGGTACGTAATAC
GTACATGCATGATACAAGACACTCGCTGTAGCTAGTTGATTGATCCGTAAGTAGCCAAGT
CAGTTGGTGATGGGCATGCAACTGGAGTGTTGCAGGTACTTGGAGTTGACGTCTGCGCTG
CCGGCGCAGCGGGCGTCCCTCTACGGGCTGGGCGAGCAGACGAAACGGACATTCCGGCTA
CAGCAGAACGACACGTTCACGATCTGGAACGAGGACCTGGAGAGGTCGGACCTGCTGGAC
ATCAACCTCTACAGCTCACACCCATTCTACATGGACGTGCGCCCCGGCGGCGCTGCGCAC
GGCGTGCTCCTCCTCAACACCAACGGGATGGACATAAAGTACGGCGGCTCCTACATCACC
TACAAGGTCATCGGCGGCGTGCTCGACTTCTACTTCTTCGCCGGCCCTTCCCCGCTCGCC
GTCGTCGACCAGTACACCCAGCTCATCGGCCGCCCTGCTCCCATGCCCTACTGGTCATTC
GGTACGTGCATCCGGTCAATCGCCTTGCTACTTCCGTGCATGGTTCTTCTCAGTGCTCAC
CCGATCCACTACTGGTTCTTGTAATGCAGGGTTCCACCAGTGCAGGTATGGATACAAGAA
TGTGGCTGAACTGGAGGGGGTGGTCGCCGGCTATGCCAAGGCCAAGATTCCATTGGAGTC
CATTTGGTCGGACATCGACTACATGAACGGCTACCAGGACTTCACACTAGATCCGGTGAA
CTACCCGGCCAATCTGCTCCGGCCGTTTGTCGACCGGCTCCACAACAACAGCCAGAAATA
CGTGGTGATCATAGACCCGGCGATCAAAAAAGAAGCAGCACCTCCTAAAAACGAGGCCTC
GGATCTGTTCCTCCAGCGAAATGGCACCAACTATGTCGGTCGGGTGTGGCCAGGCGAGGT
CTACTACCCAGACTTCATGAGCCCACGCGCCGCTGAGTACTGGGCGCGGAAGATCTCCGA
GTTCCGTCGAACCATCCCCGCCGACGGGCTGTGGTGCGACATGAACGAGCCCTCCAACTT
CAAGGCCTGGGAGCCGCTCAACGAGTACGACGACTCGCCCTACCGCATCAACAACACCGG
CGTGCGCCGTAACCTTAACAACAAGACCGTGCCGGTCTCCGCGGTGCACTTCAACGGCGT
GTCCGAGTACGACGCGCACAACCTCTACGGCCTCCTCGAGTCACGGGCCACGCATGATGC
GCTTCTCAGGGACACGGCGCGCCGCCCTTTCGTGCTCAGCCGCGCCACGTTCGTCGGCTC
GGGGCGCTACACCGCGCACTGGACCGGCGACAATGCCGCGCGGTGGGACGAGCTTGCGCA
CTCCATCAACACCATCCTCAACTTTGGACTCTTCGGCATCCCCATGATGGGCGCCGACAT
CTGCGGCTTCAACGGCAACACCACCCAGGAGCTCTGCAGCCGCTGGATTCAGCTCGGCGC
ATTCTACCCGTTCGCGAGGGCCCATGCGGAGAAGACAACCGTCCGGCGAGAGCTGTACGT
GTGGGAGTCGACGGCGCAGTCTGCGAGGAAGGCGTTGGGGATGCGGTACCGGCTGCTCCC
CTACACGTACACGCTCATGTACGAGGCGCACACAACGGGATCACCCATAGCGCGCCCGCT
CTTCTTCTCCTACCCTCAGGATGCCGACACCTACGGCGTGGACAGGCAGTTCCTCCTAGG
CCGTGGCGTGCTTGTCTCTCCGGTGTTAGAGCCCGGCGCCACCACCGTCGACGCCTATTT
CCCGGCCGGCCGGTGGTTTAGTCTTTTTGACCATTCCGCTGCCATAACCTTGCAGACCGG
CAAGCGCGTGACGCTCCAAGCGCCAGCAGACTCGGCAAACGTGCACCTGGCCGGCGGCAA
CATACTACCAATGCAGCAGCCGGGCCTTACCACGTCCGCCGCACGCCAAAGCGAGTTCCA
CCTCCTTGTGGCGCTCACGGAGAACGGCACTGCCAGCGGGGAGCTGTTCTTGGATGACGG
CGAGTCGCCGGAGATGGGAGCGTTGGGAGGCAACTGGACCCTGGTGAGGTTCAGCTGCAA
CACGGAGGATAGCAAGGGCATCATCACGACCACGGTGAGTTCGCATGTGGTGCAGAACTT
ATACGCGCCCAGCCGGACGCCGGTCATCGGCAAGGTGGTCTTCATGGGGCTGCAGTCGTC
ACCAAAGAGCTTCACTATCTATGTAAACGGCGCTGAGCTCAAGGCAGCCCGCACCAAGTC
CCGGATGAATGGAGTGTTCAGCGTCAGTGGGCTCTCGCTGGTCATAGGACAGCAGTTCGA
GATCAAGGTCGTCATGTCCCATTAACATCGAGACAATCTGTGCATCTTTATTTGAATAAA
AAAACTGAATATTTGTAGTATAGTCTCCAGTTCTAACGACTGAGAAAATAGCGTGGTGCC
GCTAATACTCCCTCCGTTTCTAAATATAAGTCTTTGTAGAGATTTCACTAGCGAACTACA
TACGGATGTATATAGACATACTTTAAAGTATCGATTCACTTATTTTGTTTCGTATGTAGA
C