| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_45997
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61920 |
1 |
315 bp |
AK373309 |
Not available |
Available |
None |
CDS Structure of MLOC_61920
Contig Sequence (5890 bp)
>contig_45997 5890 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCTGAGTCTGCGCCGGCGCCGGAGTCTGAAACGGGTTCTGCGGGGCTGGGGT
TTGGAACGGATTCTGCTGCGTTGGCGTCTGGAAAGGGTTCTGCTGCGCCGGCGAGGAGAA
GGAGAACGCCATTGCCGCGGATGGCCGAGGGGCTCCTCTCCGGCGAGGGCGGCGCGGGGA
GCCGGGGATACAGGGACGAGGAGATCGAGACGGAGTTAGTGGGCTCTGGGCCGCGAGCGG
TGGGCTCGGCGAGTTCTTTAAACCCTAGGCGACCGGAAAGAATCGGGAGCGGAGTGGAGA
ACTTGACGGTTTTACCCCCCGGTAGAAGATACAAAAGCGAGTCGTTTACGTTAAAGTTGG
GTACTTACCGAGTGCGTTTCGGAGCTCGGCCTTCATAGAAGCCGAAACTTTTTGAAAGAA
AAATTTGAATTTCTTATTTTAAAAAAGGATCTATCATTTATGTTATTGATTATGCCTCAC
TACTTAATTTTGTCATTAGAAATTTTAACTGCCCTGGATTGCCATGACTTCGTTATCGTT
ACAAGCATGCTTAAGAATGTTATTGAACACCATTGTTATCAGCTCAAATCATGTTTGTCA
TGTTATAATAACTAAAATACCTACGGACTAACATATCAACTATTCTTTTATCTCACTATA
ATAAAGTATGGATCTCACTTGATTCTAAGAACGTTTTTACTTTGCTCTAAAACTATTCTT
TTTCTTACTCGTGATAAGCGGGGCCTACACTTGTCATTGGGAGGTAGAGAAAGCTGACAT
GTTGGTCTAGGGGTATTTTTGTCATATAACATGGTTAACAGATTTGGTCGGACAATAACG
ATGTCTAATGGTATTTTTAAGCAAACATCTATGAAACAATGCCATTTTTTAGATATCTAA
TGACAATTTTGAGTAACCATCTCACGAGACGATGGCATTTTTTAGCAATTGTAAGTTTTA
ATGGCAAAACTGAATAGTGAATTTTGAGGATGAATGTGCATCTACTGAATATGATGTGTA
TGTGTGTACAATTTTAGGATAAAATACCTAGAAATGCAATCTGTGTAAAAAAAATAAATT
CATGAATTTTGAGGATGAATAGTGCATCTACTAACAAGCCTCATACTTGTTTTCTTTGTG
TAACACTCATTTTGAACGTATTTTATTATGAAAAATGACACACTTGTTCATTATGTCTAA
GTGTATGTGTATATTTTCAAAGCAAATTGAAACGTGCAAGTTTATTTCTTTTTCATTTCA
AATTCGGCCTTCATGAAGGCCGAGCTCCATTGAGCATTTTCGGTACTTACCGCACTTGAC
ATATTATTAGAAACCGGGGTGCCTTCAATACTTAATAAATGAGACTCCTTGGAAATACTC
GAATTAGGCTCAAAATAGAATATTTCTTCTTCGCAAATTTGCTACTTATACATTGGAGAG
ACACAGGAACCGTTCACCATAATAAAACTTTCCACACAAGATCCACGAAGGGGCTAGTGA
CACGAGTAGCGACGAACTCGGGGCTCAAGCCCCGAGCATACATGACACGTCTCATGATGA
CAGGCTGCCTTTTGCGGCGCACTTCGCAAACCGAGCATTTAATGTTTGGTCACGCTAAGA
GGAATAACTCGGGGCAGGCCTGCGAAGAAGGCCATCATCACGATGACCAGGTGGACGAGC
AACATGACCATACTCTGTCACGGCCCAAGACGGAAGATGGGCAGTGTGGTGCCTCACATC
AAGCACGAGCACTCAAGCACCAAACAGTGTGCGATGTCAGGTCGTCTACTAGGCATTCAA
AGGACAAGTTGTATGCCATGTGTGGTGGTTTTGTCACGGCAGATGTCCTCGTGAAAGACT
TAGTCATGAGGACATCGCAACTAAGTCGTGGCTTGAACAGGGTTGATCGGAATAGAGAGA
TGCAAGTTTACATGGGTTCGGCCCCTTAGATGGAGGTAAAAGCATACGTCCTACTTTTGG
TGTTTATTGATGATGATCTTGATTACAAGGGTGCACAATTGCTACCTAGCTCTCGAAGGT
TTATAACTTGTCCTTGCTTCCTCAGTGGATCCCCTTTATATATAGGTTGAGACCCTGAGA
TTACAACAGAGTCTGGGTCGTACTACAACCTGTGATGTATTCAACTTCTATCTTAGGTAC
AGGAAAGTTTCCTATGTCTTCCTTCTCGAGTCGGCCTACCGGGTGATGGGGTGTGAGCCG
ACCTCCTCATCTCTGAGCCGCCTCCTGGGCTTTTGTGTTCATGGGCCTCCAACTCAAGTG
ATAGCCCAGCCGGGCTATCCCCTGGGCGGGTCAACCCGTGGGGTATATCCCCAACATTAG
CCCCCAGTTTAATTTGGATTCATCCATGTTAAACTTCATCCTGAAAAATAAAGGACGCAT
CTCAAATGTGAAGGTTAAATCCAACTTTTGCCTTTGAGTCGGCATTTCTCTTCTTTAAAA
GAGCTTCGCGAGGCCGGGTCAATATTTTAGCGGGTTATCTTCCTTATTCAACACTTGAAG
TTTTATCAACCACCTTTGTCATGACATCACCTCACCTCATTGATCACTACCGTCCTCGAA
TCATCATTGTGAATCTTTTTAAAGAGTGGCTGGATCCAGTCAGGCATAAAAATCGAGGCG
GCCCGGCCGCCGCTAATCATGGTAGTCCCATTTTTTTCGTTGTGCCGGTTTGGGTTTGCC
CCATGCCTTATAAAATAGGCCACCGAGGGTCATTTTTTAACTTCCTCCGTCTTCTTCTCT
CGTTGCCTCACCCGTTCGAGCATCGTCGGAGTCCAAGCATCGAAAGCTTTCCAACCACAC
CACCATTGACGGTTGCGTTCATCTTCATCACTTGCGGCTTCCTCTCGCGTCCATCTCATT
CCAAGCTTCTTCTTCTTCATATATGGTAAGTGCATGTTCTTCCCATTAGATTTTCTTTCG
GACATTCATCGTAGTTGTTCGTTGTTCTTAGTATTGCTCGCCAATCCGGGTAGTGTAGAT
CTGAAAATATATAGAACTTCTATCATATTGTTTTTTTGTCATAAGGCAGATCTAAAATAT
TATATAGAATCTCGAGTTTGCATTTCCTTAGAAACCTCCGCTGTCGTAAAAATATTTCCA
TTTATTTTCCTATGATTTATTAGATCCATTTGTTTTGTTACTTCCATAGAAAGTCGTTGT
TGCTCAAAAATAATGTAAGTCCCCTCGAGCTCATGCTTTCTCCTATTAACCGACTTTCAC
TACTAGGAAAAACCTTATAGGCAGGACCGTAGTAGTAGTGCTGGAAGAAAGCAAATGTTG
CTGGTAATTAGCAGTAGCGCTGATCCAACCAAGTGCTACTGCTAACACCTTAGCAGTAGC
GCTGCTTACCAAAAACGCGCTACTATTATGTGGGACCAGACGATGCCGCCGACCATAGCT
ATAGTAGCAGCGTTTCCCAAAATCCAGCGCTATCTGCTAAGTGTTTAGCGGTAGCACTTT
GTTTTGGAGCACCGCTGCTGCTAGTGCCCCACTTAGTAGTAGCGCTTTAGGGAATCCATC
GCTACTGCTAGTTGCGGCTGCTGCCACACACACACCCCACCCACCCCCGTGTGGACTGCC
TTTTTCAGTTTTGCAGAAAATAAAAAAATGATAAAATCTTCAAAAAATAAAATCCTTTGA
GATGTAGTTAGGTTTTAGTGCCTAGTTGGTATACAAATTTTGAAATATGAATTTTGACCA
TTTTTTCAAATATGATTAAAAAATGTAAAACAGTCATAATTTTTGCATACGACGTCGAAA
CAAAAAAAAATATATAAAAAATAGAGAAAATTTGGGACTCGATTTCACCCGGGTTTTGCC
CGGTGAACTTTTGTGAGATGCTCAAAATTCCAAATGTAAAAAAAGTTATGGTAAAAATAA
GTTTTTTTCAGAAAAATCAAAAAAATAATTCTAAAAATAAATTTTATTACTTATTTTATT
TTCAATTGAAATTCATTATTATTATTACTTAGTTTGTTTATTTTAATAACTATTTGGATT
TCAAACAATTAAATCATGTGACGTCAAGACCTAAGGGTTAATAGGATTGATAGCTTACTA
TTGTGAGGAAAACAACAAGTGCAGACTTGGAAACTAGGGGCGAAAGAACCAGGAAGTTAA
GCATGCTCGGGATGAAGCAGTCACAGGATGGGTGACCGGTCGGGAAGTTAGACGATTTGG
AATGAGTGATCCAGGGTGGAGCAGTGATGATGGATGATTAGAGATTAAATTGTCAAATAA
TTCAAAGATTTGAAAAATAGAATAAAGCATAAAAACAAATCAAAAAATATTCAAAATTTT
GAAAAAGCACTACTGCTAGTTATCAGTAGCGCTGGACAGGGAAGCGTTACTGCTAACATT
ACTTACCAATAGCGTTGCCCATACCAACGCTACTACTAAAGTTTAGTTGTAGCACGATAG
CAGTAGCGCTTGGCCCAGCGCTACTGCTATGTATATTTCAAGCGTTACTACTAGGGTTTT
CCCTAGTAGTGTTTAGCTAACATCTTGTATTTTGACCGCCTCAACTCATGTTTGCCCCTT
TTGACCGGGTTGACTTTGAGTGTTTCTACCGGTTTATCCAGTCATAAACCTCTATTATAT
GTTGGCTCAACTTACTTTACCAACTCATTTTGCCCTTTTTCGGCTTTTTTTCCTATTCCG
TGTAATACTGTTGTAATAGTTGCAATGGCTCCAAAAACTATCAAAATTGTCGGTTGGGTC
AGATCTAGGGTATCAACTCTTACTCTAGAGGAGCTCGTGGCCCAAGGGCTTCTGTCGGCT
CAGAACAGATTGAGTGGCGGGTTCGTGAAGAAGAAGCTTCTCCTCAACCCGGACAAGGAG
AAATAGTCATCCTTGGTGATCATCTTCTTAGGGGTTTTCGGCCGACCAGGTCGAAATTCT
TCATGGATTTACTCAACTTTTTCCAGCTCAGGCCCCAAGACATTGGTCCAAACTCCATGA
CCAATATTTGTGAGTTCCAAGTGCATTGTGAGGTTTACCTTCAGATTGAGCCAACCATCA
CCCTATTGAGGCAGTTTTTCTACATCAACCACCATAGGGAGGTGAAGAATAGCCCAAGTG
TGGAGCTTGGTGGAATCACAATCCAAAAAAGTAAAAATAATCCTTTTCCTGGATCAAAGT
TGGCGAGTCATCCTAAAGGTTGGAACGCCACTTGGTTCTACTACAAGGACACTTCTCTAG
CTGATCAGCATCCTCTGTTGTGTTATAGAGCTAACCGGCTTAACCCCACAAGTGAATTCC
TTGGTTGGCCAAGCGATGAAGAGCAAAAACTGCTTTCTCCCATAATCTTATGATTGAAAG
CTTTGACAGCTCACAGGAAACGATCAGATCCGGTGTTGGTTGATTTGGAGGATTCAACCC
CTTAGTCTAAGGGATGACTTAATGTGCAACTACATTAGCGATCCAAGGGATGCCCAACGC
TTAAGTGAGATGGATTTGCCTGCGAGTGAAGTCAATAAGGCTACCAGAAAGATGTTTGGC
GAGTCAAAGGAAAAGTGCAGTGTCACCAGTTTAGCTCCCTTCTGCTAGACCAACCCGGTT
CCTTGTATAAGTGTCTTTTGTAGGCTTGTCTACTCTCTTGACTTCAATTTTCTTCAAAAA
ATTTACTTATTTAACCGGCTTATTCTTTATTGCAGTCAAAAGTAATGGGCAGTACACCAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGATATTTA
TCCAGAACATCTCGCTCGTATTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCAA
CTGACAACTGCATTAATGAACTTTGCGTAAGGTAAACAATACTTGCAACCGCGATCACAA
GCACCGTTGT
