| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_45995
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61918 |
2 |
5143 bp |
MLOC_61918.1 |
Available |
Available |
LOC_Os07g47830.1, FRAME:-1, EVALUE:0.0, 13107.m05109 protein pectinesterase, putative, expressed |
| MLOC_61917 |
2 |
2586 bp |
MLOC_61917.1 |
Available |
Available |
LOC_Os07g47820.1, FRAME:+3, EVALUE:0.0, 13107.m05107 protein acyl-CoA dehydrogenase family member 10, putative, expressed |
CDS Structure of MLOC_61918
CDS Structure of MLOC_61917
Contig Sequence (8905 bp)
>contig_45995 8905 assembly3_WGSMorex_rbca.fasta
TTGTTTTCTTAAACCTTGTTCCTTTTCCCAAATAAACTGCTTCATATAGACATGGAAACG
TGGTTATGATCCTTTATTCCCTTTTTAGGAGCAATCATTATTCTTGTAAAGTCTAATGCA
CTCAAATGTTGTTAACTAAGCATTCACATTTAAAGGTATGCATGTCTCGAAGGCTCCCCA
ACAAGGTTTCCATGTAGAGCAGGAAGATTCAACTTTGACAAGTGGTCAAGGCAAATTTGT
TCCTAGCGAAAAGGTTATGAAGCTACAGCATAAAATAATGAAGTTCATGAAAGATCATAT
ATACCCCAAGGAAGATGAGTTATACAAACATGCACAATCAACCTCACGGTGGACAATCCA
TCCTGAAGAAGAAAATTTGAAAGCATTAGCAAAAGAGGAGGGATTGTGGAACTTATTTAT
TCCGGTACTCACTATTTTCTTTTCACGCCTTTCGTATTTACCTGATCCAGAAAATTAAGA
ACTTCATTGCTTATAGTAATGAAGAGTACATCTATATTATGCTGACATCTATGCTGATTA
AAATTGTTAATCTGCAGCTTGACAGTGCAGCTAGAGCAAGAAAGCTACTCCTTGAGGACC
GATCTTATGTTTCTGCTGGAAGTTCAAATGATCTTTTGCTAGGTGCTGGTCTCACAAATC
TTGAGTATGGATATTTATGTGAGATTATGGGCCGTTCAGTTTGGGCTCCACAAATATTTA
ACTGTGGTGCACCCGATACGGGTAATATGGAGGTAACGCTTTTCAGCATGCTTGTTTGTA
GGCATGATTCTCAAAGGCTGTCAGCCTGTCACTGTATCTTACTCCACTAGCCAAGCATAT
TTTGAGAAATGACTTGTTTTGAGAATATCTATCTGCATAATTATGTTTGTCCTGGGAAGC
GTGCAATCTTTAGCATGCCAATAATTTTTATAAGTATCTTAAAATATATCTCAACTGTGA
ATGCTTTGTTATTATTGGTGCTAGTAATTTTGTATCCAACAATTTATTTATAATATGAAA
ATCACATTGTAGGTCCTGTTGAGATATGGAACTAAGGAGCAACAGAAGCAGTGGCTTGTT
CCTTTACTGGAAGGGAAAATTCGTTCGGGATTTGCAATGACAGAACCACAAGTTGCATCT
TCAGATGCAACAAACATAGAATGTTCAATATCCAGGTAATAATATGTACTGTATAAAATA
TTAGTGGGCAACAACCATGTTATCCCCCCCCCCAGTTGCAAAGCTATTACCTTTGAAATA
CGATCATATAGTTGCAAATGACATGGTCCTAGTTCCTACAGATACCAGCATTTCCTTTTG
TCTATTTTTCTCATCTTAAAAGTATTTCAGTTTGACTGCAAAAAATAATTATTGTATGTT
GCAGACCTCCAAATTCTTGTGTATTAACTGGAAACCAATTATATCCTCATGGCATGCATT
TCCTGCCCCTCGTTTGATAGTTTATACAGATGTCATCATGTTCTTTACTTTGAGCTTTCT
GCGTTGCTACTTACTTTATTATTTTCCTCTCGACAGGCAGAGAGATTTCTATGTGATAAA
TGGCAGGAAATGGTGGACCAGTGGGGCTATGGACCCGAGGTGCAAAATCCTGATATTAAT
GGTAACCATAACATCTATCCATGAAAGCGGTGTTGTAGGTGGTGTATATGTTTCTTGCAA
TTTTAAGCGGTGTTTGTTTCATGCAGGGAAAAACCGATTTCTCTGCACCTAAGCATAAGC
AGCAGTCAATGATCTTAGTGGATATCAACACTCCCGGAGTGCAGATAAAGAGACCATTGT
TAGTCTTTGGGTTCGATGATGCACCGCATGGACATGCAGAGATTATTTTTGATAACGTCC
GTGTTCCGGTCACAAATATCCTCCTCGGAGAAGGGCGTGGTTTCGAGATTGCTCAAGTAA
GCAGAACTGTTCTGATTCTACTGTCGATCATTTCCAACCCGTACTTTCTGTGTCATATTT
ATGTTGCTCTGCAGGGAAGACTAGGTCCTGGAAGATTGCATCATTGCATGAGACTAATAG
GAGCAGCTGAACGTGGCATGAATATGATGGTTGAGAGGGCCTTAAGTAGGACCGCTTTTG
GAAAGAAGATTGCGCAGCATGGTTCCTTTCAGTCAGACCTGGCAAAAGTATAACCTCTTC
GACTGCTTGCACGATTCGTTTAACTGTTTACATGGTTTATTTACAAGACCTTGAACAGAT
AAAAATAATGTTTTTTTTTTCAGAATGAAAAACCACATTAGGTAGTATCATTTTGTAGGT
GGGCACCTTTACATATAGGTGATCCAGAGACCATACAAATAACATTCCCACTCAGCTTCT
CAGATTGAACTGTTCATCCATTTGTTTCTTTGAAGCATTTTAGCGATGGTGTATGTCTAG
CTCTAACTGTCTAACATGATTACGTACTCCAGTGCCGGATAGAACTGGAGCAAACTAGGC
TTCTGGTGCTTGAAGCAGCCGATCAGCTCGACCGGCATGGGAACAAGAAGGCCCGCGGGA
TTCTCGCAATGGCCAAGGTAAAGTTCCAGCACTTTCGGCACCTTCATTTCTAACGAACTG
TAGCAACAAAAATTCAGTGAATCTGGCCTCCGTGTAGGTGGCGGCTCCAAATATGGCCCT
GAAAGTGCTTGACATGGCAATACAAGTCCACGGCGCTGCCGGGGTCTCATCCGACACGGT
CCTATCCCATCTATGGGCAACCGCTAGGACACTGCGGCTCGCCGACGGCCCTGATGAAGT
CCATCTCGGCACGATCGCGAAGCTGGAGCTGCAAAGGGCAAGGCTGTAAGATCAGGACGA
GGTCCAGATTCAATAAGGGGGACGGCAAACCTTTGGAGAAGGTCAGTTAAGGATATCATC
ACAGTCACGGGTAGATAGAATGGTGAATAAGTGGCGTTAGATTCCTCCATGTACACTCCC
TGTTTGCCTTGTCGATTCCATTGTCATTTGTCCATCAGAACCATGACACATCTTTAATGT
TCGTCCTCTTGTTGTAAAGAGTCCAACCCTACCAGCAACAGTTACATGAGTACCAGTGAT
GACTATTACAGATCTGGACAATAGTCTCAGTAGTACCAATGCGTATTTCAGATTTGAACG
TCGGCGCCAACAGTTTTTCTTCAGTGTACTGTGGAAATGAGAGCCTAATGTAATCTCTTA
TTCAACTTTTTTTACCTATGAGCCAAAATGAATGGACCCCCGTACCCATACATTTCGGTC
ATCCTATTCCTACCCGAGGCCGAGCGTGTAGGGGAAGGAGGTGGAGTTGAGCCAGAGGTC
GCCCTGGATGAACGCCTGCGCGGTGAAGTTGCCGGCGTCGGCGGCGGCGGTGATCACCCG
GTACCCCGGCCACGCCACCCTCGCCGACGTGTCGGCGCCGGGGCCCCGGTTCATGTACTC
GGCGTAGTAGAGCGTGTCGAGCGCGAAGGTGCCGTTCCACTCGAGCCAACCCCGGGGGTG
CACCAGGGCCTCCATCTTGGACTGCATGAACACCGTCCGGGAGTAGGCCTTCCAGGGCCG
TCCGAGGTAGGAGGAGAAGTTGGCGAGCACGGGGACGAGGTCGGCGGCGGCGGCGACCTT
GCATCCCTGCACGGCGATGCCGGTGTTCTGGTTGGGGTCCTCGCGGCCCTGCGCCGTGAA
GACGTTCTTCTGCCCGGGCCCCGGGCGGCGCGCGTAGAGGCTGCAGTTCTGGAGCAGGGC
GGCGGCGTCGCCGAAGACGAAGTCGACGGTGCCGTAGACGTCGCAGTCGCGGTAGAACTG
GCGGAGCGAGTGCGCGTAGAGCGTGTCCTGGTACCCCGCGAAGCTGCAGCGGTAGAACGC
CGACAGGTCCGCGTTCACCCGCAGCGCCACCGCCTGGTGCTTCGCCGGCCCCGCCGCGTT
CTCCACCGTCAGGTCCCTCGCCAGGAACCCCGTCCCGATCACCGCTGCACAATTAAATCA
ACAGATCCGATGTCGGTCAGCTACATTCAGGCGAGGAGCAGTACCAGATTCTATCTATGG
CTGTTACTGCACGTGAACGCGTCCGTGTACTTGTTGCCGGCCGGTTGACGCACTGGCGTG
GTGCAAGTCGTGTCGTGTGTGGTCTGCGGCTCTGTGTCGTGGTGCAGCCGGGCCGTACGC
GGACGCGGGTGGCCAGGCCATGGATGGGTCATGGATGAATGAATGCGAGGAACAGACGCA
CGTGAGGGTACCGGTCCGCCGGTGTGGTGAGTGGTGGCGCACGCATCGACACCGTGGACG
ACGACAGCGCCGTGTCAACCAACCACACCGCGCGCCACATTCGGCGACGGAGTTAATCAA
AGGCTCTAGCAGCACCAATGGAGGGCCCTCTATCTATCTTAAGTCGCCCATGCATGCTCT
CTCCTAAAATGCGTGTGCTTGTACTACCGCATGGGGCAGCCGGACAAGGCCGGAAAGCAC
CGGCGTGGTGGACGAGGCCGCGTCCGGCCGGCCGGATAAGCCACACATATCGGTCTAGAA
CTCAAATGATCGTCACGACCAACGTCGGCTTGCTCTTGTGTCCTTGCTCATCGTGAGCAT
GAGTATCCCCAAAACGACTTGCCTTTTTCTGCTGTGAAAGGCGCGCATGCATGTGCTCGG
TGTCTCCCTCCACTGGACGAGTGCGAACTGTTTGGCAACCTACAGTACCGGGACGAATCT
ATGTGTCGGTGCCTGCAGAAGATCGAGGCTGGGCCATCCATCCATCCGTCCATACTCCAC
CCCCACTGCGATCCAAGGGGACCAGCTCGACCGATCGATCGGAGCTACATAGGCACCAGA
CACCAGTTCGTTGACATCCACTCAGCGCAAACGAGAAAGGATGAGAAACGGAAAAGGAGA
TCCAGGCGCCCAAAGAAGGTGCGCCATCGTGCCACAATTGGCAGTGGTGGCTGTTGAATG
CGGTCAGATCACACGATCGGTTCCTGCTACCATCAACCCCATCCTCCTGGTGCATTGCAT
TGCAAGCTACAGACCGGCCGGCAGTGCTAGCTCGCTTGTCAGCCTAGCTTTGCCGTGCTC
GTCCATGGCTATCTCACCCACCCACCCAACCCAAACCTCACCATTATAAGCCAAGAATCA
ACGACCGTGTGCCGCATCATGGTTGGGATCATGGCTGCATCGCAGATGCACAAATTATTT
GTTTGCATGGGCAAAAACATCCTTTGAATTGAACCGTCAGCTATTCGACCGGCCGATTTG
TGGGCACGAGCTAGCAGTATAGCGAGCGGCACCAAATCCAATTATCTCCCGCATTTGTCC
GTAACTATTTGTCCGGCGTGGTCCAGTCCCTGCATGCACCTAGTACGCTACGCTATGTGC
TAGTAGAAGAAGTAATAGAAGCAGGCCCTGTTCCCCGTTGCTACCTGACCGATGACACTC
GTGATCAGTGTACCGCGGACGGACGCTCCGTCACGAGCCGCATCCCACGCAAACCACCAA
GCCGCGCCGTGCGCGTGCATATGCATCCTCACCATGCCGATGCCGGCGTCGGCATGCCGA
CATCGGCTCGTGGCGAACACTGCGCGACCGACCGTGTAGCCAGGCCACTGTTCGTGTTTA
TTATGTGGCGAACACTGAAGTGATTTGATTGACTATGTCTGCACGGACGTGGGCGGGCTC
GCGTGGCGTACCTAGCGTGGCGGAGCGGAAGGTGGTGTAGTTGTCGACGACGTTGCGGCT
GGCCTTGATGACGGTCTTCCACATGCCGTCGCCGACGAACATGATGTTGGTCTTGTCGCT
GCCCACCTCCACGTTCTCGAAGTAGCCCCCGGCCTTGATGTGGATCACGTACCGCGTCGC
GCTGTTGTTGGGCGCCGCCGCCACCGCCTCCGTCACCGTCGTGAAGTTGCCGCTCCCGTC
CTTGGCCACCACCAGGTCCGGCACGCTCTCCTGGAGCAGCCGCCTCCGGTCCGCCGCCGC
CACCCACGCCGGGAACCCGCGCCGCACCGGCCCGTACCCCTCGAACACCTCCTCGCCCGT
GGTTCTTCTTGTGGTTCTCGAGCGGAGGGCGCGCCCGCGGCGGCGCTGCGGGAGGCGGCG
GACCATGGCGAGCGAGTTGGACACGAGGTGGGCGACGTGGTAGATGCGGCCCTGGATGTA
GGGCCGCACGCGGCCGTCCTCCGACGCCGACGGCCCCGCGAACCCCTCCAGGCAGGTGTA
CTGGTTCGTCATGGCCGCCGACAGCACCGTCTGCAGGCCCGCGACGGAGTCCTCCGCCGT
GCGGTTCCCGGCAGAGAGCTCGGCCGCCGCCGTGCCGAGCTGGCTCAGCGTGTGCCCGAA
CAGCTCCTGGCAGTCGGACAGCGCGAGGCGGTCGCGGAGGCGCAGCCGGTGCGGGCGCGC
CAGGTAGGACGTGCAGTTGGACGCGGCGGACCGCACCGCCGACGCCGCGCGCCCCACCAC
CAACGAGATCACGTCCCCGAGCGGCTTCTGCGCCAGCCCCTCGACGCCGGCCAGCGCCGA
CGCGCAGACCTCCCGGTGCAGCATGCCCGCGCAATGCCGGTCCACGGCCGCCGCGTGCTC
GGCGTCCGCATTGGCGTCGAGGAGCGTGCGCTCGTGGTGGTGGCCGCCGTCGTGGTCGGC
GTCGGCGGCGAATGCGGTCTGGGCGAAGAGGAATGTGAGGAGGAGGAGGGGGAGGAAGGT
GGCGAGGAGGAGGAGCCTGGCCGCTTCCCGTCGCTTGGTTCTTGGTGTCGGAGGTGGCAT
TCCGCGGTGGTGGGATCACTACCGTGGGAGTGGGAGTGGGAGTGGGAGTGAGCGGGGCCG
AGCGTGACGGACAGGGGCCGTGGTGCGTGTCGGTGCGAGCGGGCGAAGGAGATTGGAATG
GAGGAGCGTCACGTTTTATAGCAACGTCGACAGTCTCGTGGATATATATATATATATATG
CATGTACGGTGCGAGGAAATGAAGGGCTTGTGATTGCAGGAGGGCCCGACCAGCACACAT
GGTTTAATTAATTTGGTACTCGAGCTCTGGTCCTGTCCAACAAGGTTAATCTTGTTTTAG
ACTGGAGAGATCTTTGGCAAAATTTGGTACTGCGCTCTCTGCATTCATGAATGGACGACG
GCTTTCAAGATGCAACCATCCATGATCACTGATACTCCCTCCTTTCTGGTTTATAGGGTT
TAAATCTAAAATCTCATCAACTAAGGTGAATTGTGATGGTTTATAGGGTTTAAATCTAAA
ATCTCATCAACTAAGATGAATTGTGAATGGATGACCCTAGTTCTAACTAGCTAATGAAAT
GTTTCTCACATATTCAATTTTCAAGGCAATAAATGTAGCATCTTTTTTTTTATTGGACTT
GCATGATGCATGTACTAAAAAAGATGCATGCACGGTCACTAATTTGCTTTCCCTTATCTC
TACGAATTAAATATGATGTGAGACTTAAAGCATTTAACTCAACTAGACTCAAAATGAGCC
TAGTATAATGAAAATCTGAAATTTTGAAGATGAGCCATATGAACCAGAAAGGAGTGAGTA
TAGTAATCCCTCCGTTCCTAAATATAAGACCTTTTAAAGATTGTACTATAAACTANNNNN
NNNNNNNNNNNNNNNNNNNNNNNAGTATAGATTCACTCATTTTACTTCCTATGTAGTCTC
CTAGTGAAATAACTAAAATGTGGGAGTACTAGACATGGAGCTGCAAAACCGATGTCACTG
CAAACGAACAGCAAAACCGATGTCACTGGAGTACATTAATAGCAGCGGAAGCATTTCAAG
ATGCGCGGCAATAGGCCTATGGCCACCGAGAATTTCTCTCGACCTCACCGGAGACGATGG
CCACATCGGCAAATTTGGAGCAGTGGTGCAGCACGCGCAGGCCAGCTGCGACGCACAGTG
CTCAACCACATGGCCAGTGCCATGGCCGGCCAGGCAGAACGGGGTGCCGCTTTTACCGAC
GCGGTTTGGCCACACTAGACACACCGGTAGCGGCAGGCAGAGGCACACTCAGCCGAGGCA
TGGATGGCCATGCGCTCTGTGCGTGCTCTCGTAGCGAACAAGCAGCGGACCGGCGGGCCG
AACAGTTGCTGTCGTTTGGAGCTGACCCTGTCCGATCCGATAACCTCGTCACTCGTCATT
TCGCCACTCGTAAGATTAACTGCTTTTTTCCTTCTCTCTAACAGGTTATTATGTTCAGTT
GTTTCATTTTGATTTTATCTACACTGGCTTGGGTTTAAATGCTTCGTCGATGTATATTTT
TACGGCGGACGCCGGCGCGCCGGCCCAGAGACTCGCGTCGGTCGTACCTCACGCAGCTCA
GCCAACATCCCGATCCCCGCCTCCCATACATCTCGCATGCGCCGCCGTATGCGGGTAGCC
CCCCGGGCTCCCCACGCTCGTCATCATCGTCCCCATCGTCAGCCTGCTCGCCGCGCTCGC
TGTTGACATCGTGGTTTGCAGCAACCCATCACCAACATCTCGCCTCATGTGAAGCAAAAA
AAGTTGTCGGCGATAGCAAAAAAAAAATATAGTTACAACAAAACAGAACGATGGATGTAG
CAAATTTGTATAATGCTTGTAGCATTTATCCATCATGGTTGCAGCATTTATCTTTCTCAT
GACTCGGTTTTGTGCCGGAGAAGACAGATGGTTGGCTTGCAGTAATACTAATGACGGTTA
CCCCGACACCTCTGAAGTCCGTGGTGAGAATGGAAAGCCTCGGCGCAACAAAAATAACAA
ACACTGACATAAAAATAGCAACAACAATAATGTTGAAGAAACATAAATCAATGATGGATT
CAGCAACAAACGCAACAACCAGAAGAAGAATACCTTCAAAGGGAAGAAGGAATGGCCCGT
CTCCCGTGGACATAATCATTGATAGGCCCTGCCAAATTCATGGCACTGCGGATAAACCCG
TTGTTGGGAAACGTCGCATGGAAAA
