Contig Data
morexGenes
Links



Map Locations of contig_45992 (3559 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45992

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61916 1 2249 bp AK357759 Available Available None





CDS Structure of MLOC_61916






Contig Sequence (3559 bp)

>contig_45992 3559 assembly3_WGSMorex_rbca.fasta
ATGATAGATTACCGAGTGGGCCCAGAGANNNNNNNNNNNNNNNNGGAGTGACAAATCCCA
CTCTCGATCCGTACAACCCAACAAACACTTTCAGAGATACCCATCGTGCACCTTTATAAT
CACTCAATTACGTTGTGACGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGAGTTG
CACAATCTCATGGTCAGCAAATGATACTTGACGTTAGAAAAACTATAGCAGACGAACTAC
ACGATCTTGTGTTATGCTTAGAATTGGGTCTTATCCATCACATAATTATCTTAATATTGT
GATCCCGTTATCAACGACATCCAATGTCCATGTTAAGAAAAACAAGACCATCTATTGATC
AACGAGCTAGTCAACTAGAGGCTCACTAGAAGCATGGTGTGGTATATGTATTCACACATG
TANNACGGTTTCCGGTTAATAAAATTATAAAATGAATAATAGACAATTCTCATGAACAAA
GAAATATAATAATAATCATATTATTATTGTTTTTAGCGCATATTTTCAACAGCGGCGACG
TGCCGCGCGTGGCGAGCACGGACACATCGGGCTTCGGTCGCGCCCAGCAGCAGCCAAAGG
AGTGGTCAGCACCAGCGTTGTCTCGAGGGCGCGGGCTAGCCCACCGCTGGCCGAGCTAGA
GCCCTAGAGCACCGCGGCGTGCCCAGCAGCCACGCCAGGGCCCTGCAGCACCGCGGCATG
CCCAGCATCCACGCCAGGGCCATCAGAGCGTCGACGACCACCATCACCGCGACGGTCATC
CCGCCCGCTGTCTCGGCGGTTGTCCTGCGAGACGTCCCGAGAATGACGCGAAAGGCTGCG
CCGGATACGGTCCCCCATCCCCCGCGCCGGATACGGTTCTCGAGGCCGCGTCGCCAAAAA
ATCGGTCGACTCCCGCTCGCATCGGGAGGGTCACCCAGTTCACATGGGGAATGTTTGCCG
GCGACCACTTCCACGCCCACACCCCGAGCACCTCACATATAGTCGTTCGGATAATGGCGG
TTACGGCTGGTTTTGTTTGTGATTAATTAAGTGCCAATAACCGGTGCTTAATGAACTAAA
TATTGCTCATGAGATTGTGCGGTTGTGTGCATGCATGCATCGCATGGAAGTGAACAAAGA
ACTGGTTCCAGCTCCGCGTCAGCCACACCTGAGCAGCACTAAAGATCATGCATGGATGGA
CTCTCAAGATCCACCCATGCGGCGCTCTGTCCCTCCATTCTCACTGGGAGCAAATCGACT
GAAACAAATTTGGGCCAGTCGACTGATCAAAATTTCGTTTCAGCTGATTGATCTCTAGCC
GGTCCCATTTCTATCTCATTCTTTCAAATAATCTTTCCTACCACCGCTCTTGTACCATTT
CAACTCATCATCCCTGAGCAGCATTTTCAATTGGGTCGCGAGAGAGATGAGGGAAAGTTG
TCTCAACGCAGTTCCATAACTGAACCAAACATTTCATTATCTATACCATATGACCGTAGT
GTGTTGCCGTATGGTCAGTTGTTGGATCACAAGCTTTCACTTACCTCACTGTCTCGCTCG
ATTACCTTTCCTCCAACGACTTGATGCGCGTACATATACTGATCTGTGCAGTGTGCACGT
AGGAATCCTATAGCACAGACGTCGTGGTCACCACGACGGGGCTCCTCACCGTGTACTTGC
CGTTGTCGTCCACCCACGTCAACGACCCATGCAGCACTACCTCGGGCATTAGCTCGTCCC
GCACCTGAACCACGACCTTGTACCTCTGCTTCTCGTGCTTCCCGCCGAACACCAACCTGT
CTGGCACGACGCTCACCTTCAGCCCGTCCAGTCCCTCCACTGTGGCGCTGTAGCTCGCTG
GCCCGTCGCCCACGTTGGTCACGGTCCGGGCGAATGTCTTCTCCCCGGCCGTGTCAAGGT
AGGCGATGAAGGACGGGTAGTTGAGATCGAGCGATGCACCGACGCAGTCCACGGGGGCCG
ACGACTGCGCCACGGTCTTGATCTGCGCCGTCGTGTAGTTCATGGCACACATGAGCTTGA
TGTAATCGTACGGCCCGGCTTCGTAGACCAGGCCCGGGGCCAGGGCGCGGTTGGGGTCAA
TGTGGCCAGACCCCATGGCGAGCGGTGAGGCTGGCCCGTTCTGGTTGCCGCCAGACATGT
CTTTGATGGGAGCGAAAGTGTTGTCCACCGCGCTAGCCGTCGTCATCATCGCCGACCGCA
CCGCCGCGGGGCTCCATTCCGGGTGGACGGCCTTGAGCAGCGCCGCGACGCCCGACGCGT
GCGGGCACGACATGGACGTGCCAGATATGATGTTGAACTTGCCAAACAGTGGCTGCTGGC
CAACATAGGCGACGCTGGCGTTCTCCGCCCACGATGCGAGGATGAGCGAGCCGGGAGCCA
ACAGGTCGGGCTTAAGCACCGTCGGGCAGCTCTTTGCCGGGCCGCGGGACGAGTATGTCG
CCACCAATGGCGCGGGCTTCGTGTCCACCACGGTCACGGCGAACTTGATCGAGGCTTTGG
GCGTGCGGCTCCTCTGGATGTAGTGCAACAGCGCGGGGGCGTCCTGCGGGCTCAGGATCA
CGCCCGGGAACTCGAAGCTCTCCGCGAGCTCCCTGAACGGGTCGCTCGACAGGAACAGCG
CGGCGCGCACCTTGGCTTTCCGTGCCGCGGATACCGCGGACCCGAGGGAGTCCGTGTCCG
TGGCGTCGCAGAGCACGACCTTGTCGCGGTTCATGGAGAGCAACGTGTCGTTGTCGCACG
TGCGGAGGAACACCAGCCCGGCGTTCCCGAGGCTGCTCGGGGTTCCTGGGTATAGCGATG
CACCGACGAAGGTCGTGCCGTCACCGAGCCTGACGACGCCGGAGAACTCCCGGTCCACCG
TGCCCGACGCGACGGTGAGCACCCATGGCGAGCCGTTGTGGAGGTACCCGAGGTCCGGTC
CATCGTTACCCGCCGAGTTTGACACGAACACGCCGCGCTGCATCGCCGCGAACGCGCCAA
TCGCGACAGGGTCGTCGTATAACTGCCGGCCGTTCAGGCCGAGGGAGAGGGAGAGCACGT
CGACGCCGTCGGCTATGGCCTGGTCCATGGCGGCGAGTATGTCGGAAGTGTACGCGCCCT
CGTCCCACAAGGCCTTGTACACCGCCACCCTGGCGCGGGGCGCCATGCCGCGAGCGATGC
CTCGCGCGTAGCCGAAGAAGGACGCGCCCGACACGGGCGAGCCGGCGGCAGTCGACGACG
TGTGCGTGCCGTGGCCTTCCGTGTCCCGCGGGGAGTTGACAGCGATGGTGATGTTGTTGG
CGATGAGGCCCTTGTTGAACTTGCGCGCGCCGACGAGCTTCCGGTTGCACACCTTGGTGG
CGTCGAACGCGGTGCCGGACTCGCAGAAGCCCTTCCACCGTGCCGGCACCGGGGGGAGCC
CATCGTCGCGGAAGCTCGCGCTCTCAGGCCACACTCCCGTGTCCACTACGCCGATGATCA
CGTTCTCGCCGTACTTGGACGCCTCCCATATCCCGCCGGCCGCGCTCACGCCGAGGAACT
CGGGCGTGTGCGTCGTGTC