| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_45865
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61789 |
2 |
1118 bp |
MLOC_61789.1 |
Available |
Available |
LOC_Os01g72430.1, FRAME:+1, EVALUE:1e-93, 13101.m07893 protein NADPH quinone oxidoreductase, putative, expressed |
| MLOC_61801 |
2 |
2552 bp |
MLOC_61801.2 |
Available |
Available |
LOC_Os02g51930.1, FRAME:-3, EVALUE:0.0, 13102.m05912 protein cytokinin-O-glucosyltransferase 2, putative, expressed |
CDS Structure of MLOC_61789
CDS Structure of MLOC_61801
Contig Sequence (6974 bp)
>contig_45865 6974 assembly3_WGSMorex_rbca.fasta
GGGGGGCCGCAGCGCGCGCCCGCGGGGGGCCCCTTTGGGCCCGGGTTGGGACGGGGGCGG
GGCTTAAGGGTTAGGCCTTTAGTCCCGCCTCTTTGGTCCCGGTTAGTGAACCGGGACTAA
AGCCCTTTACGGGCCGGGACTATAGGCCCTGTCCCCACTAGTGACTACAACTTTTATGAG
TAGGAAAATTGCCATTACAATTTTGCACATTGAATAAATGCCATTACAATTCTTCCATCC
TCCTCTATATGACATTATGTTAAATTTGAGACACAAATACCCTTGTCTTCCTCTTTTCAC
CCTACCCCCATCTTCTTCTACCAAAATAACCTACCATTATTTCCGGCTAGCATGGTACCC
TGCAAAAAATATCTTCCAACACAGACCATGCATATTGTATGGGGCCTCGTCACTTCACAG
ACGGCTCCGGATGAGTTGTGCAAACGCTGCAGCCGTCTCCCACAAGAATGCTTCCATGGT
CATCATGTACACACAATTTTTTACAGCCGAGATACGGGGTCATGTCACACCGGCAAGACA
ACATATCTACGCCTTGTCGAACCACTCAATGATGCGGCTTCTATGGAATGCATGAAAGCA
GCCTCGCAAGTTTATGGCGCCACCATTGTCTATCAGCCAGCTCCTCCATGTCGACACCAG
GAGCACAGGTAGGTGCCATCACAGTTCCCTTGCTAGCGGCTCTTGTGTCTCGCATATCAA
AGGGTTGAGTTTAGCCTTATGCAGGCATGTGCCAGCATCCAGATTGGTTCTAGCTTGATG
GAGTCCGTGTGGAAGCTCATGTAGCAGGACGCACGCATGTGGAATCGGGACCTAAACCAC
TAAAAGAAAGCCAGGCACTCCCACAATCTCTGCTTGAGACCTCGTTCCTTCAAATGGGGA
TAAGAATGACGGGAGGCTTGCAACATCGAACATCCAATCGCGCAGAATATAGGATGTTAG
ACTTTTTAGAGAGCTTCCGAAGGTCAGCAAAGCAGAGGGTCCAGAACAAAAGATGCAAGC
ATATCTGAATATGTACAAAGAACCACTCTCGCCGCAAGTGATCGAGGCGTTGAGCTCTTT
GGTGAGGATTGCAAGAAAGTCAAAGTTGGACCTCTCAAGATGCTTTCCACAAGATAATGT
TAGCACATGATTCTTTATGCCGATACAGAAGAGCCATTCGATATGGATGGGTTCTCTTCG
ACGAGTGGCGGCCAATTGAGTTGCACTTGAGTCTCGCCTTACTGTTTTGGGTCTAGGCAC
TCTGGTGTATGGATCTGATGATGTTTTTATCTTACCCCTATCCCCTAGTTCTAGTGCCTC
TTTTTCTCGATTTTTTAGGTTTTCATCCGTTTTTCCCTAATTAGCCGAAAATATTAGGTT
TTCGGGTCTGGTATTTTTATGAACTAGACAATTTATATTTTTCTTAATGAAATGCAGGAA
CTCCCTTCACCTTTCGAGGTGTTCTCAAAAAAATAGTCACGCGTGGCGAGTGACGCCATC
GATGAGGTTTGAATACTCTATACTGGTGGTGGCTGATGGCTGTCTTGCTCGAAGTGCAGC
GGTCGTTGGCCATATACTCACGTGCAGTGCTTACACATGCATCCACGAGCCTTCCTATTA
CTTAATCATATTTTTAGTACTACATTAGGCAACTAGCAATCGATCAGAAAATGATGCCAT
CGATGACGATCGCATACCTTTCCACCTACGCTAGTGGATGAAGTTACTCACTCTATTTGT
ACAGCCAGCCAAAACGGGCACGCTCTGACGTTCAGAATGACCTGGCTGAGATCAATTTTG
GTCATCTATTTAAGCCGTCTCCTCCACCACAACCGGACACCAGTCAGGCAGTCACTGATC
AAGCTCCACAACCCATCAGTAAACCAAGCAGCCACTCACTCTCAGGTTGTTACGGCAGAT
CATCAAGATCGAAGCATGGGATCCATCACTGCATCGACGACGGCAAAGCCCATCCTCCGT
GTGGCCGCCATCTCCGGCTCCCTCCGCAGCAACTCTTGGCACGTCGGCCTCATCCGCGCC
GGTACGTACGTACACACATTTCAATTTTGCATGTGCTTACGCACACTGCTGAGTGCTCAC
TGTGCCTTGTATGCAAGATGCAGCCGAGGAGCTGTGTGAGGAGTCCATCCCGGGGCTGCG
CATCGACCACGTCGACATCTCCGACCTGCCAATGGCCAATCCAGACCTCGAGACTAACGG
CGGCGACGGCTTCCCGCCGGCCGTGGAGGCGTTCCGCGACAGGATCACCGCCGCCGACTG
CTTCCTCTTCGCCTCGCCAGAGTACAACTACTCCGTAACCGGCTCGCTCAAGAACGCGCT
GGACTGGGCGTCGAGGGGCACGCACAAGTGCTGGGCGGACAAGGCGGCGGCGATCGTCTG
CGCGGGAGGCGACTTCGGCGGAGGCAGGGCGTCGCTCCACCTGCGCGAGATCGGGATATA
CCTCGACATCCACTTCATCAACAAGCCGGAGCTCCACATCAGGGCGTACGAGCACCCGCC
CAAGTTCGACGGCGAGGGGAACCTCATCGACGCCAAAGCCAGGGAGCGGCTCAAGAAGGT
GCTCCTCTCGCTGCAGGCCTTCGCGCTCAGGCTCCAACACAAGGAGAACTGAGTGAAGAA
CTGAAGATCGAATAAATTGGGCACCAGAGCTACCTACATAGTCTGCATTTCCGTGGACGT
GATCACCTTTAGCTTGGGCTATGGCCCTGGTTTCGTTAGTCTGAGGCTCTCAGCAATTTT
TTTACTTCGTATTCGTGTAACTGTATTTTGTACTTCCGTAAAATAAAAAGATGCTTGTAA
TAAATCTCCAGCACGCAGGGTAAAATTTACTCAAGCATGCTTAGTGCGATTGAAGATGTC
ATGCATGCTAATGTTGTATTTCGCTGTCGGGGGGAGTCCTTTTAGATAGCATGTCATATT
TTTAAGTAGCACGACATTTTTTTGTCGGTGTTTGTGTGAAATTCGAAAAAACAAATGCCT
CGAATCTTTTGCTGCGAAAGTATAAATTATATTTATTTTTTATGTATATTTTTGTTCTTG
TATACAAATGTTCAAGTAGAATGAATCCACTGATGAAATTTTGTCAGAATAGGATTGCCT
TTTCTTGGTTTTCTAATCCTAGTACAGTGAATCTGTACGTTTATTTTTTTGTTATTATTC
TCATTTTCATTTTCTTTCGTTTTTACATGAACACTTAATAAAATTCACAAATTTTTTGCT
TTCTTAAATTCGTGCTTTTTTCTTTTCACATTTTTTAACTAGATTTGATAAATCTCATCT
GGATAACATTTAACAATGTACCATCTAAGTTGTAGTGTGTTCGATCTGTTTTATTATTAC
CTTAGCACAAACTAGACCCGGCTCCGTTTTTGTGGCGGTGCCCTGCGGTTGTGTGCCCCC
ACCTTGTTGCCGCCTTGTGCAATTGTAGGCCCATTTTTGTTAGGTCCATTATTTGTTCGG
CTTTGATATGTCTGAGTCATATCTATAATTTTTCATTGTTTATGTTAATATTATATGACT
TTCATATATTTTTGGTAACATTTTATATAATTTATTGGACTAACATATTGATTCAGTACC
AAGTGTTAATTCCTGTTTGTTGCACGTTTTTTGTTCCGCAAAATATCCATATCAAACGAT
GTCCAAACGCCATAAAAATTTACGAAGAATTATTTTGGATTATATGTGATTTTTGGGAGG
TGGAATTAACGTAAACGGAGGCCACGACCTCCACTACCCACCAGGGCATGACCTATACCC
CCAGGGGCGCCGTGCCCTCTAATGGCCACACCGTGAGTCGGTTGGTGCTCTTCTTTGGGC
ACAAGAAGGTTAATTTATGAGGAAAAAATTGTGCAAAAATTTGAGCCCGATCGAAACGGA
TCTTCGGAAATTTAAGAAACGGTGAAGGGCCAGAAAACAGGAATGCGAAACAGAAGAGAA
CAGAGAGGGAGAAATTTTCCCGCCTTAGATGCATGTGCATTATTAACTTGCAATTGAGCC
CAACTTTTTTTTCTCTGGTTGCATATCCACTCTTGCATCGCAACTAGGCTCACTGTTTCT
TTTGTATTGCAACTAAGCCCGACTTACTTTTTGCACTAGTTGCAAGTCGACCCTTAACTT
GTAATTGGGCCTGATATGTTTTTTGCCTCAGTTACAAGTTCATCATGGACTCACATCTAG
TGGCCAACTTTTTATTATCCCAATTGTAAGTCAAATTTTTAGTCCCATTTGCAAGACAAC
TAGTGACTGACAACTCTTTTGATCCTTTTTTTGCCGTAGTTACAAGTCAACCAACAACTC
ACAGCTAGACTCGACTGTTTTTTCATTCTAGTTACAAGTCCAACATTCACAAGCATCTCG
CTTATAGATCCTTAGTTTTTCCCCAATTGCATGTCCATCTTGACTCGCCAATGGGCGCAG
CTTTTTTGCTCCACCCATAAGTCCACAATCAACTCACAACTCGGTTTGATGTTTCTCTTG
TGTTGCAACTGGGTCCAAATCCTTTTTTGCATTAGTTGCAAGGACACACTCAACCTTACT
AGGGCTGAATTTTTGGTCCAAATTGCAGGTCAATCATCGATTCACAACTGGGCTCACCCC
TTCTTTTATCCCACTTGCAAAACACACATTGACTCACAATCGGGCTCTTGATCCTTTGTT
TGGTTGTCGCACATGCAAGTCAACAAATGACTCACAGCCGGGCCGACCTTTTTTGACCCA
GTTACAAGTCCAACATTAACGTGCAACTGAGCTCATGATATTTTTTTTGCCCCAATTCGC
ATGTCTGCACTTTTACTCACAACCGAGCCCTATTTTTTCACCTAAGTTGCAAGTCAATCA
TTGACTCACAAATAGAGCTGACTTTCTTTTATAGTTGCAAGTCAACCATCCATTCGAACT
GTCGTCGATCTTTTTCGTCCAAATGTACGTCCAACACCGACATACATTGGGACCCTTAAT
CCTCTTTTTGCTCAGTTCCACACCTGACTCACATTTGTTGCCTTCTTTTTGCCTCGGTTG
CAAGTCTGCAATCAATTCTCAAATACGGATGACTATTCCCTAGTTGCAAGTCAATTATCA
ACTTGCTAGTCGGCCCAACTCTTTTTGTTGTCAGTTGCAAGTCCATCATCAGCATGCAAC
TGAGACTGGATCCTTTTTTTGTGCCATGTTACCCCTTCGCTAACAATTGGGTTCGAGTTT
TTTTCAGCCTAAATAGCAAGTCAACTATCGACTCGCAACTAGGGTTTTTGTTACCTTTTC
CCCGTGGTTTGCTTCACAAGCAAAGGAACCCCGCCATACCTTTTACCCCTCAAAAAGGCC
CAAATCTTCGTGGTGTCTTTCTTTTTTGAACAGCTCCTCGTTAATGCATATTGGCGTAAA
ATTGACCAGCCTTGGCAAAGAGAGGTTGTTGGCGGGCTGACTGTTTTGGGGCCGTTAACT
CTTCTACCCTTTTTCATGCTTCGTACATTGAATTCTTGTTTCTAGCGTGCGTTCTTCCTT
CAATATCATAAATGTTTCAGTCCGGTATTTTGTTTATTTACTGTTTGATTCATGCATTGG
CTGTTTGATGATCATTTTCTAGAACGAAATGCTGACCTGAGAAAAAATTTGAAGGTAAAG
GCCAGAATGAAAAAAGGAACATACAATGTTGCCGTCAAATTTTGATTAAGTGACTGGTAG
CAAAATGAGCAGAAAATGCATTTGCCTGCTGCTAAAATATGTTCAACGTATATTACAAAA
GATCAGCGTACATTTAAAAAATGCTTACCTTGTTTGAGGAATTGTTCAGCATGCTATGAA
AAAGAGTTTGCTTTATAATTAGAAAATGTTCATCATATGTAAACAATGTTCACCATGTAA
TTAAAAATGTTCATCATACATTACAGAAAAATATTCAACATATATTTAAAATATGTTCAC
CATGTTTAAAAAAATGCCCCCCGTATATTTGAAAAGTGTGCATGTATGAAAATATAGATC
TAAATAAGAAAAAGGTAAACAAAAAAGGAAAGTATAAAAATAGAAGAAGTAAAAAATACA
GAGAATATAAGCCAGAAACGGAAAAGTACCAAAACAACAAGCCCAAAACAAAATCGGAAT
AAAAACGACAAACAAAAAACTAAAACACACACGCACGCAAAACAGCACAGCGGAAAAAAC
ACCATTTCCTGGGTACGCCGGATAGACAAGTTATTTAAGGCTTAGGCCTCCTTTGGTTCA
TAGGTAGAATTATCATAGAAATAGGAAACTTGTAGGAAATGAGATGACATGCATCTCAAA
TCCTATGAGTAGGATTAGAAAAAGAGATGCCATTTGGTTTAAAATCAATGCCAAGCACAT
GAACCTAGGCAAATCACTTCAATAAAATAAGATGACCAATGCATGAAAGAGTTTAGATGG
TGAATCATTTAATAAAATGGGCTTAGCAACAACAAATTAAGCACTTATGCATTGAGGAAT
TGAGTTGCTAAGCTATTTAATGCATTTAGCATTTCATCGAAGCAGCCTTGCATTGGAAGA
GGCCTTAAATAAATAAGTAAATCTTAACAAAAACGTATATAAAAAGGTACTCCCGTGATT
TCTAACAAACACACCGTTTACAACAGCATTAGAGCATGGTTAATAGTATAGCCAGCTGCT
AGCTATAAGGCTACTCCCAATGCTCCACCTTGTACAGGTGATAAGGCTGCCACATAAGCA
AAAAATCCGATGTGGCATGCTAATTAATAGGAGAGAGATGCGTGTGGTGACCCCGTGAAG
AAACAATGTTAAGCGCGTGAACCTAGGTAAAACAATTAAGTGAAGAAAATGCATCAATGC
ATGCACAACTTTAGTTACAAAAGCATTAAATAAGGAGGCTTGGCTACAATAAGCTAAGCA
ACTATGCATTGGGGACTTTAGTTGCTAAACTATTTAATATGCTTAGCAAGTACAATAAGG
TATAGTCAGCAGAC
