morexGenes - Barley RNA-seq Database

Contig contig_45863
Source Contig contig_45863
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_45863 (8130 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_45863

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_61788	3	2663 bp	MLOC_61788.1	Available	Available	LOC_Os01g52130.1, FRAME:-2, EVALUE:0.0, 13101.m05452 protein sulfate transporter, putative, expressed
MLOC_61787	1	606 bp	None	Available	Available	None
CDS Structure of MLOC_61788

CDS Structure of MLOC_61787

Contig Sequence (8130 bp)

>contig_45863 8130 assembly3_WGSMorex_rbca.fasta
AGCCAGCTCTAGCACGTGCTCTTAGATGCTTTATGAGAATGAAAGATGAGCCATATATGA
TAAAAGTAGTACTCTTTTATAGCTCACTATTGTACAAGCTAGCTATAAGATGAGCTATAA
AATGGCTTATAGTCAGCAGTTGGCTATACTATTAACCATGCTCTAAGTTGTTATCTCAGC
ACCATCTACCATGTACCTTTGCCATTTTCAATTTATCAGAGCATTATTAATTTAATGTCG
GGACAAGCATCGTTAATTTAACGCGGGGCCTACCCCTTCTTTCTAAAAAAAAACAGATCA
AATTGGTTCAGGCGCTGTGGTAACTTGGCGCATTCTCCTATGCTGGTAAACTAAAAAGAA
GACCCTCACAGAAGATGGGCTCAGCAACTGGATTTCAAAAAAGACGTGACTCAGCAAAAG
ACAAAACCAGTGTTTACTCAAACAACCTGCACCTGCCAGTACGGTGTAGTGCTGGAGTAG
TACAAAATCGGCCGATCGTGACTCAGCTCATTTCAGTGAACCACACGCAAGGCATCCATC
AGTGATCGCCGGTTCACAACCATACTGAAACCGGAAACCTCTTGTAACATGCAGGTTAGA
TTAGACTAGATTAGGCAGAGCATTATCACGTACGTACCCATCGATGCGTCCAGGCCATTT
CGTCCGTCCACCTGCTTCTAGGATACGTCTGATCCTTGGGATACTGCTAAAATGTGCACC
TATCTGGCTAAAACTGGCCGTTCATGAGCTGTTCTTCAGTTACGCGTCCACTTCATGCGT
TCGCCTGTGGCATTCAGATCAGAGGCTGTATGCCAGCCTAGTGATGCTAAAGCTGGTAAC
CATGGACGCCCTGCCCTTACCACGTGTCACCTACTCTCTTCCGCTGAACGACTAGTAAAA
GGTAGCGCGGTGCATCGCCGCCATCTGCCGTTGATCGGGGATCCGACGCCCGCCGGTCGA
TCAGTCCGCGAAGCTGAATAGAGTCGCAGGGTTGAACAGTAGGACGTCGCTGTGCTATAA
ATTCAGGCGCCCGCTGCACACCATCCAGACCCCCACCCCCTACCACTATCACTACCAGTA
GCACTCTCCCAGTCCCAGTGTGACTTGCGAGCTCGAGCGCGCAATGGCGGCTCGCGGGGG
GGAGGCCCCGGTCCTGGCCATGCTGATCTCCTTCCTCGCGGTCCAGGGGACCCTTGGGGA
TTTCCCATTCCGATGCTGCCACTGCGACGAGTACCGCAGGTGCAAGAGCAACCATCCAGG
CCTGGAAGAAGACCACTGCATCCTGAAATCCTTCAAGAACTGCAAGCTGACTTCAACCAT
GGCTGCCCCAAGGCGGGCTGCAGGCACCGTGTTGGCCCCGGTGAGTTCTCCTTCATCCCC
ATCTTCGAGCTTATGCCACATGTTCTATGCAAATTTAGGTTAGATTAACTGTTTCTTTGG
CTGATCATCTCTCTGCTGAATCCTGGCAGACATGGGTGCGGCCTTCGCAGCCGGTGGTCG
CAACCTCGGAGAGGCCGACGGCGCTGGAGAGGAAACAGCTGCATGAGAGCTGGGCTGCTG
GAGAAGAAATATTCGGCCACACCCCAGGCTGAGAATGCATAATAACTACTGTAGTAGAAT
AAATAATGTCATGCCATCCTTCCTTCATAGTACTAGCTTGTTATGAGTGAATGTCCTGCC
ACTTTGAACGTTTCCTGTCCTGGACTCCTGGTTATGAACTTGAGCATGTGCCTGTCGTTA
TATATATATATATATATATGATCAATCAATGAGAAAAACGTAATTTGCTGAAGTCAGGCC
AGGACGTATTTTACCCCGCGCTCCCATATGATTGCTGGAGAAAAGTTTGCACAAAGAAGA
GATCCAAATAAGCTAACGAGTAAAAAACAACTGCAACATAACGAGATCCAAATTTGCTTA
TTAATCTTGCAGTGAAATATAAACCCATCTATACTACTAATATATTATTGGTACATAGAT
GCATGGCTTCCTCCATCACTTTGTAGCAGAGGAAGTATGATTTATTCATCTAGCAATGCA
ACAATCTTTTCTTATGAATTCTACAGTACAAGCGAATCTGTGAGGTTCGGTGTAACCTCT
GAGAAATCTAAACTGGTCTATACACAAGAACAGAGCACTATTTTCTCCCCCAAGGCCCAA
AGCCCTCACAAGGACCTTGAACCTACCCTGATAAAGTTTCCAGCACATCCAGAGTCCATC
CATGATCCATCCAGGCACCAGGCACCCAATCCATGCGATCGGATCATTCGTCTTTGCTCG
CAGTTCTGAACCTTCTTCTACTACTTATGCATCTTCTTCTTCCTGCCTTGTGCCACACCA
CAATATCTACAGCAACACCTGCTAAACGCTGCTATACTTCGCTCCCTCCCTCCTTGCTTC
TGAACATCTGCAGCTCGTACCGGCAAGATGTGATGGCCTCCGTGATGGTCAGGAACACGC
TCTCCTCTCCAACGGTATCCTTGATGTACCCTGAAATCACCAGCTTCTCCGTCACCTGCA
GCCCAGGATTCGCCAGAGCTATCTGAAAATCACCAAGAGCACCACATCAAAATTTTGAAA
CTAAACATTCAGCGTTCGTATGTGATGGGGGTTTGGTTTACCTTGATCCCCTTCCGGCCC
AGGCTCTTGTGAACTTCTCCTAGCATTCCGATTCCCGTGTTGTCGATGGAAGTCACGCCT
GCCGTGTGCAGTTATGTCAAGTTAATGATCAACGCCTGAATAAAACAGATGAACTGGGAG
GGTTAGATGTTACTTACCACCAAGATCAAGAACCAGGCATTGCAAGTCTTGCCCGTGCCC
CTTGCAAATGTGCTCCTCGTCTTCAACCCATCTCAAAATCCTACAAGGCACCGTGGCAGT
TAACACCTCGTCACGCGATAGATAGTTACGATCCAAAGCGTAAATGCACGCCGTTGTGCT
CACCTCTCTCGCAGGTAGCCTGCGTTTACGAAGTATATAGGAGAGCCCAGCTGCAAGACG
AGGATGTTGGGGACGCTCTTGGCATTCGGGTATTGCTTTACGTCGCGAAAGACCTCGGTC
CCCCTTATGGTTCCGAGCTTGAATGTTGCTGGCCTAGCCACGTACAGCAATGCTCTGAGC
ACAGACAAGCCTACCTGCAAATGCAAAGAAATGTTGTTTGCAAATCAATAAACACTGTGC
AGGGAAACATGGTCAGCACGGCACTAGCTGAAAAATGGTGATAATTAAGGTAGAAAGCAG
CATGAGATTCTTACTGATGCGCTGAGGCCGATGACCATGGTGAAGAAGATGACGCCCAAG
AAAGCGACCATGCAGATGCAGAAGTCGAACTTGTCGATCCTGTAGAGGTGGATGAACTCC
TTGACCTTGATCAGCCCGATCATGGCGACTATGATGATGGAAGAGAGGGCCACCAGTGGA
GTGTACTTGAACAGAGGAGCCAGGAACAGTAGCACCAGCAATATGCACACCGACATCACC
ACGTTCGACATGGGCGTCTTGCACCCGGCGTCGAAGTTCACCGCCGACTTGGAGAAGGGC
CCTGGAACGTAGTACAACAAACACAGTGTCATTGCCAGCAGTCACAGATTCAGACAATAC
ATATCGCTCTCTGAACAGAACCTGCAGAGGCTGGCCAGCTAGTTTATAATCGTAATAATA
AGTACCTGTGGTGAGGTAACAGGAGGTGAAAGAACCGACGATGTTCATCATGCCGAACGC
AATCATCTCCTTATTACCGTCGATCTGTTCGTTCTTGATCATGGCCAAGCTTCGTCCCAC
GGCTATTCCTTCCTGAAAATGATCAACATAGAGAAATGAGAAATGCTTGGCGTGGCGAAA
ACAATGTAAAATTCGTGATGATCAAGCGTACCGCGAGTGCTAGGATCCCAGACAAGAGTC
CTGCTTTCACAGCTATCCCTACGTGCTTGCCATCGAACTTCAACTGTGAAATGGAGATGG
GATTGATCCCTTTCTTGAGGTCGCCAACCTGTTGCACGCAGCAGCGAACAAAGACACCGT
GCAGTTAGGCAGAAACTGAAATAGATCTTGGCTCTCAAGTCTTAATTAAGAGCATACATA
AAAGTAAAAAATGGAAGGTGACCTACAATTGGGATGCCGTGCTCATCACCGTGAACAAGG
AAATCAAAGACGCCTCCGATGACGACAACCATGAACGGCGCGATGGCCGACACCCAGAAC
AAATTCGGCATTTTCTTTCTCTGAAATTTTGCAAATTATTATTAGAAGAAAAAAAAATAC
TAATAACACTTAAAAAAAAGGAAAATCAGCAGCGATTGTGGTAGCAACATATACTTTTGA
CTGGATTCGAGTACCGTCCAAGTAAAAGAAAATCCCCACTTACCAGATGCTTACTGGAGA
GCAGGAAGAGGATGAAGCATATGCCGAGAAGTGCACTCTGCCATCTCCACTAGGAAAAAA
ACAAAGAGGAAACAGAGATAGTTCAGTTGAGGATCCCATGGATGGCTACTGCAGTTACCA
TCAGAGATCGTTTCTTTCAAAAGCAACAACGTGCCAGTGCTACACGTCGACTTCTCGTGT
GCACAAATGGGCACCATCTGTGACAATCATCATGAACGTGGTCACACAGGTCTGTCCAAA
ATGAGCATGAGCAGGACATTTCCTATGCAGACGCAAATACTGCTAATATTCTTTGTTTGT
TCGTCAATTTTATTTCTTGTTACTATTTCAAACGATAAAAAGTTATCCTCCTCTACTTAA
TAGATTAAAAAGCTAATTTAATTCGAGAAAATAATACGCGGTTATTCCTAGAACATGGGA
GGAGTATTTTTCTTTTCTTGTTATACACGGTTATTCCTGGGAGAAGTTCCATGGGCGGTT
ACGGCATCAACTCCCTTCCGATAGACTAGCGCAGTCACCCCTTTCTGGTTCCTAGGGTGC
GGCTGCATGCTACTTGTGGTATTATAATACGTATATACATTCATTGGGCATCAAGTAGAG
GGAGCACTAAAAATGGGACAGGAACCACCGGACCAGAACAAGCCTCCCTGGACAATAGAG
TTGTGGCAAAGCAGCAGTCTTCCTTCTCCAGTGCTGGCGGCGGCAGAGGGAGAAGTGCGC
ACTGGTAGTAGAGTACGTGGGATGGGATGACGGACCGAATTAAAGGGTTACCTCGTGTCT
GTATTTGAAGATGGAGCCTAGGACGGAGATGAGGTCGGTCTTGGGGGTGAAATGCTTCAT
CCCCAGAAGCCCCTTGAGCTGCTGCATTATGATGATCATCGCCGTGCCGCCCATGAACCC
CGTGATCGTCGACCGCGACAGGAAGTCCACTATCAGCCCTAATCTTCACCAACCCAAAGC
CCACAGTTAGTTAAAACCACACTGGCCGACCAATGAATCCTCGCATGTAACGGACTGATG
ATTCATTTGGGGATTAACAATCAACGACCATGGCGACGTAGTGCACCGGCCGGCAGTAGA
GTGGCGGCGCGGTACATGTATTACATACCTGAAGACGCCTAGGGCGGTCTGGAAGACGCC
GGTGAAGAAGGCGGAGGTGTAGAAGAGCTGCAGGTAGAGCTCCGGGTTGTCCTCCGGCGA
CACCTCGCCCTCGATGATGGACGCCAGCAGCAGGGACGCCGCCGCCACCGTGCCCACCGC
CAGGTTGTTGGAGCTCCCGAACACCGCGTACAGCAGCGGCGGCACGAAGCTCGAATCTGG
AAATTAACACCCATATATGGATCGAGTACACGGTTAATCCCGACGGCGATTAGTTTTAGT
TGGCGCGCATGCAAAACGCAACCGTATATGTATATACGTCCAAATTAATCTCAACCGCCC
GTGTGCGATGGATCCAAAGAACGTACAGAGGCCGATGACGGGCGGGAGGTTGGCGAGGCC
GGCGTAGCTGATGCCCTGCGGGATGGCGAGGCTGGCGATGGTGAGGCCGGAGAGGAGGTC
GAACTTGAACTTGTCGAGGCCGTAGTGGGGCACCCACTCCAGCGCCGGCACGAAGTACTT
GAGCGCGCCCCACGCCCGCTCCGCCGGCGGCAGCGCGCCGAACCCGCGGAACGGGTCGTC
CGGGAAGAAGGTCTCGGCGAGGCCCGACCGCAGCGCCTCCGAGAAGGGCCGCCTCGCGGA
CAGGTTCACCCGCTCCCCTCCGCCGCCGCCCTGGTGGTGCGTCATGTGCTGACCGTCGTC
GCCGGACGCCGTCCCCATGTCACTACGTGCGTGCCCAGATCGATCGCGCGTCTTGCGTAC
GGTGGTGGATCCGGAGAGCGCCGGTTGGAGCAGAGTGAGTCGCCAATGGGGGACGGAGCA
GGCGAGCGAGAGAGGGAAGAGCGCGGTCCAGTCGGGTGTGTGGCTGATCTCCTCTCTCGC
CTAATTATGGGCTGTGTTAATTAGCGCTTAGCGGCGGGAGGGGAGCAGACCAAGACCAAG
GCGGAGCGGAGGAGTGTGGGTTATCTGCGGCTGTCTGCGCGTACGTGCGTCGGGCGGGCG
AGCGAGCGAGCGAGTCGGTTGTGTGCTCGGATCGGGCGCGCGCATGGCGGTTTATATAGG
CGGTGACGGGGGACGGGGAGGAGGAAACCGATCGACGACGTGGGGGCGCGCGCGGCGGTT
TTGGAGGGCTGGATGGAGCGGTGCGTGGCGCCATAGACACATGCGTCGTGTGACGCGGCT
GCTGATGATGGATCGCCTGGCGTCGTGTGGCGCCTGCATGCGCCCGGATCTGAGCGTACG
TGCGTGCGTGCGCGAGTTTACTTTGCGACTTGGATCGGAGGAGGAAGGGCGCAAAAAAGT
TGTGGCCGGGAAGAAGTGAGAGGGGGTTCTCACGCACGCACGCACCAGGGTCAAATTGTA
CAAGTAACCGTGCAAAAGCGACGGGATGTTTCCGCATGTGCGCACGTACCAGGTTTACGA
TGGATGCACGGATCTTGTTCGCTTCGGTTAACCAGATGTGGCGACCGATCTAATGAGTAA
TGCTAGACGCATGGAGATTTGGACCAACATGGGTTTCCTTCCATTTTGTATTACAAAACA
ATCAATCGATACAATCAAGAATAGATGCTGAGACAGACAGCACAATCATGTTTAAAAAAT
ACGAAAGATAAAAAAAAGAAAAAAAGTGAGCAACACCGAATCAACGAAAGTTGTAGTGTC
CCGCAGCTGTTGTGTCCATCGGATAATTCCACCACACTCCACTGTCATCGGATTGCCGCA
TGCCAAGCAACACCTTTAAGAAAGACTGCAACGACGACGACGCTGCTGTCCGGACAAGTC
CTAGGATTTCTCCCGGCACACGGAAGAGAATGGGGGAGAGGTACACCCGGCGCCCTTCAG
GAAGGGAGGAGGCGCCCGCAAGCATCACCGCACCAGTGTCGACCAAATCCGACAGAGATT
TCTCTCGAGATTTAGAGCCAGTTTTTTTGACGGCTTAAAAAATGGAATAAGCTTACCATC
ATCCGAAGGATTACAGCGGCAGCTTCCACCACTTTCTGTGCATGACACACGTCCTTCGTC
AAACGCGTTTGTGTAACACAAGCTATGCTTTAGAAAGATATATCATGTTACGATGGTCTA
CAATGAGATTATGTTTTGCAACAATATTTATATAGCGAAATTTTCTATAACAAAACCTCG
GTTACAAAAAAAAAATCGCAACAAAATCTCAGTTGTAACTTTTCTTTAACCAAACTTGTA
TTACAGAAATAATTCCGTAACAAGCCCTATGTTGCATTAATAGAGGCACACTCGGCTCGC
TCGATCCAGTGAATCTGACGGCTCACAACCCGGTTGATATTTTAAAAAGATCAGCCGACG
AACACGTAGCACTCCTCTTAAAAAATAAATTGTCTCTAAAATAATTTATTTATTTTGGAT
ACTTCTAGATTATTTTATCCATAACTGGTTTAGAGGTCACAATGCATAAGAGGGACGATT
TTTATCCATAACTGTTTAAAATCCACAATGTATAAGAGCGACGGTTTATGAAGAAAGATG
GAAATGAGGTGGCTTATTTTCTAAGTTGTCAAATGAACTAGCCCTTACTTAAGAATTTTA
CGGGGTAACTAAAGTGGACCAATAGAATTGAAGTTTAGGGGATGCAAGGGCCCACCCCGG
ATGAAAGTCATGAGGGGGGGGGGGGGGGGT