Contig Data
morexGenes
Links



Map Locations of contig_45858 (5340 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45858

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61777 3 2008 bp MLOC_61777.2 Available Available LOC_Os01g19450.1, FRAME:-1, EVALUE:6e-67, 13101.m02115 protein ATP-citrate synthase subunit 1, putative, expressed
MLOC_61775 1 200 bp None Available Available None
MLOC_61776 1 237 bp MLOC_61776.1 Available Available None
MLOC_61778 1 679 bp MLOC_61778.1 Available Available None





CDS Structure of MLOC_61777






CDS Structure of MLOC_61775






CDS Structure of MLOC_61776






CDS Structure of MLOC_61778






Contig Sequence (5340 bp)

>contig_45858 5340 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGGATTGACTATTCGTCACCCAGGGTGGAGGAGAGAAAGGAGA
GTGGCTGCATGGGGAATCTTTTACACACCCATCGCTGGAACCGTAGTGGACTGAATGGGC
TCCAGCCTAGCAGCAGTGTCGACAGCCCAAATGCCCTTATGTAGAAAGAAAAGAAAAGAA
AGGAAAGTAGAGGGACAAGCAGAATATGGCTAACACAAATATTTAGCTATATGTTTGGTA
TGACCCTAGTTAACCTACCGAACGGTTTACCGATAAATTCAGTTAAATGGCTGATTCGCC
GATTAATCCCTATTCAGCACCCGACCAAGATGGTACCCAGTTGCCGATATCTGGAACATT
GGTGACATATAGTCCTTACCTTGTTGTTGGCACGTGCATAGCTAATTAGCTGCTTTGCGT
CTGATTCAGGAACTCCCTCTGCTATAATGGCTACAACTCGGATAGTCGGCTGCTTCAAAG
CTGACATTGAAGAAGCAGCCGCACTGCAGATTTAGAAAATACAGTGAAATTGTAGTTGCT
CCAGATCATGCAGTATTTCCCAGACAGATTGTGAATTCTATAACTAACCTCCGGAAAGAT
GCAAAGTTGATAAATACATCCGCAGTTGGGTGTGCATTGCAAGCAGCTTCAATTCTATAA
AAGATATATGAATTGATAAATTGTTCACACAAATGTTGCGCTAGCAAAGTGCAAATGTAA
TATCCCTCCATCCGAAATAGGAACTGCACTCTTGTTCAATCAAACAGGATATATGAGGGA
GCAGAGAGCTCACGTAGGATGAACTGGAATAGCAATTTCTTCTTGTCCAAAGAAAAGTTT
CTGGAACCCATCAGAACCAGGATTGATTATTCCAGCAACAGAAGGTGTTTCTCTCCCTAT
CAAGCAGCGCAAATTCAGTTAAGAAAGAAACCAAACAGAAACACTATACAGTCATTTTAA
ACCAATAATAGGGAGAATATACCACAGAGGAAGTCAAAATCAAGCATCCTTTGGATGGGG
AGTTGCTTATAATTATAGAATAATGCTTGGGTGGTTTTTGAGAAAATTTGACCTGTCGCC
ATGATTTACTTCCCCTGCAAATTAACATGTATTAGCCTATGATATAACCACAGTAGTACT
TACTATTTATAAAACCATGAATTGTAAGCCCCCAACTAGTCGTCGAAGTACCAGAATATA
ATGAAATCATGTTAGCACAATGACAGAATTGTTGATATGATATTTCAAGCATTAGTCCAA
CATCCAACACGGCAACTGGAAAGCATTTTCTATTGAAATAGTATTACGCCGGTTATTTTC
TATGATTTCAAACAAGCTACTGACATAACTTATAGCTGATGAAAAAAATGCATCTGTGTA
CGCCTGTGACATAGGGAAGAATTAACATAGGAAAAATTCCTAAGAATTGTAATCCTCCGA
AAATCCTTTGAATCAAAGGAGCCCAAAAGTATACCATATACGCCATCTGCACAGAACACC
GGATCTCAAATACGATGCACCCGCATATTTGGTTCTTGCTGCACGCTACTTCTGGTGACT
AAATCAGAACAATGCCCAACCAAAATATCACACTTTTTTTCCACCAAGTAAAATCCACGT
AAATATACAGATGTATGCTGACTTCCCACTGAGCTCAGAGCTTTCTATTCATCATCACAA
GCAGACAAAGGAACATTTTACGACTGACGCACTAAGCCAACCAAAGAGACTCGGGAACGT
ATGGTTTTATATTTGTTGAAATATGTGACCAGATACTTAGTCCATGCGTGATTCACTCAA
AAATCCTACTAAAATAGGACAATCAAGAACGTATAGAATCAAGTTGTCCGATCCTCAAAA
GCAATAAGATATAAAGTTTTTTTGAAATCTGAGCAGAACACCAGATCTCAAATATTGTGC
ACCAGTACATTTTACTCTACAATTGCCCAACTAAATCCAATATTTAAATTATGTTGGCCA
CCAAGATTCAACTCCACAGTGAAGAGTATACTAAGTTTGCGTTTGCACCGAGAACAGAGT
TTTCTCCCTTGCATGCCTAGTAAACAATTTATAGGGACTAAAAAGGGACCTTAACACCTG
AGCTGATCAAATGGACTTCCCAGACCACACAAGTTTAGCTCTTGCCCATTGCAACCCAAA
ACCTATCAAATTCGGGACACTTCCTAAGCCACAAGATCTCCTCAGATCCACACAAAAGGC
GAGGGCAGCCCAAATCCGACAAAAACACAGGGAAAGCTTTCACAACTCCCCACACGACAA
CGCAGCAATCCGTCAAATATGAAACAAAAAAGACGCCAAAGGGGCATTTTTTGGTCTAAT
TCGGATCAAAAGTAGCAAGCAGGGAACCCATTCCCACCCAAAAACCCAAAACCCATAGAA
TCCAGAAGGAGGGGCTGGGCTGGATCTCAACGAAACACCGCAGGCGGGATCCCGCTAGCC
GCGGCATCCACCGGGCGACTGGGGCGAACAGAGCCGCAGATCCGCGGCGTCGGGAGCACA
ACCACTCGACCCGCCCGACCCACCAACAATTCGACTAAACGCCAAAGGAGCAGTAACAGC
AGAGGACTAGATGCAGTGCGTGGGGGTGGGTGCATGAATGTGTGAGCACGGTTGGCAGTG
GCGAACCTTTCGAGGCGAGGCAAGGCGAAGTGGAGGCCGAATTGCTCTGGGACGGAGATT
GATCTGGGTCTCGCTCGGGGAAGACGGAGCTGAGGGGCAAGACAAGTACGACGAGAGGAA
TTTATAGTGGCGGGTAGGATATGGAAAGGTGAGAAGTAGACGACGCACGCCCCATCTCCT
CCAGTCTTCACCCAGCCAGAGCCCCCGACGCCTAGACGACTGTTTAGACCTGGTCTATGA
GGCGCCGGGCATTTTTGTCTTAAAACTAAAACTAGTTACTTTGAGATCCAGCTGAGCCCC
TCCTTCTGGATGCAATACATAATGTCTCAACGAAACAGCATGGCAAACGCACGCTTTTAT
TCATTAATGCAAATCTCAATGCAACATAGACTGTAACCTTTATGTTGTGTTGCCATTCAT
CATTCCACGTCTTCTCTCTTATGATGTCACACAATGCAATACATAAAACAAAAGCTTCCA
CTATATCATCATACAACATTCCTGGCTCTATATATAGACCTTAAGTTTGCCATGTTGAAA
CATTAACAACACTTTGCTATAGTATTAGTCCAAAGTCATTGATATAAAAAATGTTCTTTT
ACAGGTTCATACCAAGAATATCATCACAACTGATATTGGCATTTTATTTAATGCATCAAT
AGAATGTATTCAACATCAAATAATCATACATCAAAATTACTACATCTGAAAAGAATAAAT
AAAATATTAATTATGAATAAAGTAGTACACGAACTGAATCAAGAAATGCATCTGATGTGT
CGCCAAAGATAACCACTACATCCATGGTTTCAAAGGTAGCAACTTTTTATTTACACTGAG
TGGCATAAACTCATGTATGATACGGGGCTCTACCCCAATATTCCATAATATATCACATGT
GCTAGCAAACATCTTCAATAAATAAACAATTATCAAGTAACAAAACAGTGGCCTGGATCT
AATGAAATAAATAAGGCAACAATTATATGTTCATTGTATGATCGTCCATCTCTTGAGATT
GCATCTGGGAAGATAGCTTCCTTCTCACCCCTTTGCGATGTTGAGATAGATGGTAGCAAT
CCACAATTTAGAAGTAGACAAACGAAGATGAAAACAAACTATTAGAAAACATCAGATGAA
AAAGTATTAAACTGAGAAATAAGGTAAAGTTCTCCATGAGAACCATACCAATAGCTCCTT
CGGTTTGAACTCATACTTATCCAGATCCTTTACGGTTGTCGATTTCCACTTGGGAATAAC
AAGCTGCAAGTGGAAGCATGTAACAGTCCGAGACCGACGTCCTAGAAGATTCCCTTTTTA
TTTCGTTGTCGTCGTGTGATTTATTTGATTGCCGCATTCATCATCGCATCATTCGCATCA
TCTTCATAGCATCGGAACTCCGTTGCCGTCATTTTCCAGAACTTGCATCCGTTCGTAGTT
GTCGGTTCTCTCCGCTCTTGTCGTTGACCATTTCATGACCAACCACAAACGCACGCGCCC
GCGGTATCAATAAATTATTGCTTTTAAAAATGTGTATAAAACATTCTCTGAATGGGTTGA
AAGATGGCGTGTTGTCTTGTTTTATTGTAGGTAGACCGCGTACCAAATTTCGTCGCATTC
AGAGGTCGTTTGATACCCAAACCGTTAAACCTATAGTGGCACTATAGCCGGTTAAAACGT
CAATCATTTTCAGTTTCCTAAAACATGTCACGGCCATAATCTTTCCCTCTCTTCTCTAAG
AATAGCCCAACTAGCAAACCCCGTGACCAAAGCCATCCGGTCCAATCAAAACCCTGCCCT
AATCCCCTAACCTAGTTACCCCTTCTATATAAGGAAGTTATGCTCCCTGCCTCCCTAACC
CTAGGCCTTGCCACGTTCCCCATGCGTGCCCAACCTCCATCGCCACCCTGCCCGCACAAC
CCCCTCCCACCTCGCGCCGGCCCTCCCGGCCCAGATCAGGGCCCACCCAAGCTCATCTAG
GCCCAGACAAGCCTGCTGCCGCCCGCAGCCGTCGGCTCCTCCCCGAGGTCCCGCCCGCTG
GATCTCGCGCTCGTCGTTGCTCCCGTGCTAGGCTGTCGCTGCCACGCCAGAGCCGCAGCA
GCCACCGGCGGACCTCTTGTCGGCGTGACTCACCCCCTAGCTCTTGCCGCCATCCGCGAG
CGCCCATCGTCGCTCCTCCCCATCACCGTGCCTCCTCGCCAAGCCCACAGCCGCTCCTCC
CGAGCCGCCCTGCAGCCCCGCACCACCGCGTCAACCTTCGTCGTGCCGCCTCGCCATCGC
TGCCCCGGCCCGGTTCTGGATGGATCCGAGCAGCCCCGCCCCGTCCCTACCGCTAGAGCC
ATGCAACACCATCGACTACCACGCACGTGAATCTCTTCCTCGATCCCGATTGGATTGTGA
GAGACGAGCAGTTGGGAAGCCTCCAGTGCCTCGTGGGCCCAGCGCCCAGGCCGGCCGAGA
CTACCTCCCCTTGCCTCGGTCTACCTCACCACCAAACTGGGGCCAAGGCCCACTAGGTAA
GCGTCGCTTGCTAAATTCTGCATGTGCATCATATAGTAATTGTTATAGCATATTTCTCCA
TATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTGCCTTAAGTTATATT
CGAAGAATATGTCCATAGGCACTTCTTGAAGTACATCTGTTGGTTTCAAGGATTTTATAT