Contig Data
morexGenes
Links



Map Locations of contig_45830 (5029 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45830

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61749 1 456 bp MLOC_61749.1 Available Available None
MLOC_61750 4 1660 bp MLOC_61750.1 Available Available LOC_Os01g22660.1, FRAME:-3, EVALUE:0.0, 13101.m02404 protein GDSL-like lipase/acylhydrolase, putative, expressed





CDS Structure of MLOC_61749






CDS Structure of MLOC_61750






Contig Sequence (5029 bp)

>contig_45830 5029 assembly3_WGSMorex_rbca.fasta
TTCTCCCGCAAGGGTTTCCACGTAAAAATCTGTGTCTCTCGTGCCTCGTTGATCTCGTTT
TATCTACAGTCTCTTTTCCGCTATCCCTACGGTGACTTTCAGTTGGTCTGAGAAGGGATT
CTTCTTGGTCTTGGTGTTCTCTTCTCGAGGTGTGTCTGAGAAAGAACTCTAGACCTTCCT
AGCTCGAGAGTTTGCATCACGAAGACAATGCTAAAGAGTTTGCATCACGAAAACAATGCC
TAAAGATGACCTTCCCAATTAGCGTAGCCGAGCCAATGCATTCCACAAAGATTGCTGCTG
CAGCATCCCACCGTTACAAAAGGGCATACCTGGAAGTATTAGCGTGTCGGATGTTACACG
GCAATCAACAGCGTACGGAATGCGCCAGTGACCCCCTTGAGCTTTTTGATTTTTGCATCA
GTTTGTGTGGTGAAGATACTGCTTGGTTGTACAGTCTATGAATTCCACATGACTTCTAAC
AAGACTTGGGGTCCAGCATTCGTATTGAACACAATTGAAGACTTTAACTTTCATTCTTAC
CATTAGCAAGGAAATTTGCCACAATTTAGTGTTGTGTCGCGCAGCCAGCCACGAGCCCTT
GAGCTAAATATTTGTTCTATGTTACCAGCTGAAAAGCGAAAAGCAGAGCATTTGGAGAAC
AGCATATGCTGTAGCAGGGAATAACCTGAGTAGCATATTTACAATAGTCAATACATATAA
TCTATCGAACTTCACTTTGACCGACGAGGATCCATCTTCTGGTTTAAAAAGTTGACTGTA
TGCATGGGAGCACTCGTCATGACAATATGTTTGATGCATCATCGCAAGCTTAAAGATAAG
TGTAGTCATTTCTACTCAGCTAGCTCCGCCACTGTATGTGTCCTAACTATTTGTTATTGA
AAGAACCAAGGAAATAAGACGAACATCAAAATGAAAAAAGAAAATAATATCATGTGCTAT
AATATCATGTCTGTTGCCAATATGGTATTGGTGTGCCTCGAGATATTTCTACATCGGTGG
TGGTAGCTATGTTTATAGTTGGTCACAATTCTATCGCAACTACTACGCGCACACACAAAG
AACATACACAGACAGGTCCCCCAGATTACAGATGTCACGTCCACATTAATCTGCTATCAG
CCCCAAAATTAGGAGAAAAAACGGATCCTTACAGATTTAAGTAATTCAGTATTTTCACCA
ACATAGTACTGTATGAAGCATGAAGTTTGATCAGGTCTTGCAAAACTGATCAAACTTGAG
CTTTGGTCTGGAATATGCGGAGCTCAGTATCGCCGCAGCCGCGGCGGCATTGGCGGCCTC
GGTGAGGTGCACACCGTCCCAGCTGACAAACTTTGAGCCATCAGCGCAGACCGTCGCATT
CGGAGACTGGCAGCTCCTGCTCAAATCATAGTTGTATGGCGGACCTCCGTACCCGCAACA
CGTCATCAATGGGCTGTCAAAACCTGGAGAAAAGCAATCAAATCGTCTTAGCAAATCTCA
CCAGATATCATGCGAACCAGAGACATTTGATGAGCTCACCGTATTTGGTGTGGTTGGCCA
CAAGGTCATACTTGATGGCAAAAAGATCGGTGTACACAACGGTCGCGTTCTTCAGCTCTA
CATTCAGCTGATCGCAGAGGCTGCCTAGCGCCGCGTTGAACGTGACCGCAGCTCTGTTGT
ATGTCTTGAGGCAGCCGTTCTGATCAAGGTCACTGTCGTTTTTACGTGGAATAGCGAGCT
TCTGAGGCAGGCAACCAAGAGCCCCTGTTCCATGTATCCAGAAGTTCCGACTCCCGTTGG
CATACAGAAGCTGCAATTTTTGGAAGAAGGCAGAGTTGTGGTTGTCCGTCCTGGCAGCAA
GTGAAAATGGTATAGTAACTTACATTCACAAAGGCAGAAAAGTAAACTTCACCTGAACAG
CATCCTTAATCTCCGCAAGTATTGGAGGGAACTTCGCGACTACTTGGTCGTAAGGCAAGT
TGGACAGAAGAGCGTTAATATCATTCTGTCCTATGTCTATGGTATATAGAGCATTTTGGA
ATGATTCTGCATCGATTGGAACTTGCTGACCTGTGTATAGCAACAAGTTTGCTCATTTAC
TATCAACTGTATAGCTCCACGCGTCTTATTTCATTTGAGTTTGAGGGAAAATACACGGCA
AACAAACCTTGATTGATGAGTTCCAAGGATCTGGCTTTAAAGAAGAAGAATTCCTGCACC
TGTCCATGCAATGTAAAAAGAACATCCCGTGGTAGTGTTGTTGAACCGCTAATGGCGAAA
TTCACTCCGTTACTGTAGTTAGAACCCAATGCCTTCAGATAAGGACTCAGATAGCTTATG
TTTAAGCTTTCACCTGGATATATTTTTGTCATTCATGGACCCACTATTAGTAAGGTCAAC
AAAAATACCCATAATGACTTAGCGCTTCTCATGAACACGTATGCGAGTCAAATTAGATGC
GAGAAACACACCAGCTGCAAATTATTGACTCTGATAAAAGTTGTCGTCTTATTGGACATT
AACTTGTATAATCTTCATGATGAAACTTTGAACATCAATTTATGTACAGACATGTAGCCT
CATAGGAATATGTCTCATGATAACTCTAACAATACAACTTTGATGTATATGTACTAGTAC
TAGTTCTTTTGTTATAGATGCTCAAACTTAGAAATGTTCGGCTGGGAAAAGTTCTGCAAA
GCAGCAGCTTTCATGTCCATTTAGGAAGTCATATGATAGAAATGAATTAATGTGCTACTG
ATTGTAGCCCCACTAGATACCATGGATGGTGGCTGGTGGGGCAACACTTGACTATCATAG
CAAACTGTTAAGGACCTTGGTCCACAACAAAATAATATTGATATGATAATGGTCGGAAGA
CCAGGCAAGGGCGGCAAAATTCGTTGTTTTGATCTTTTCTCTAAAGTTAAGCCGGATCTG
ACCCCGTTTGGAAACTTTTTTCGGACCTGACCCTTTTGCTACCGTCAGACCCTTTGACGG
TAGGGTATGAAGACCTACCGCCAAGGTCCCCGGCGGCAGGCAAATGGCCTACCGCCGCAG
GGGCTGGCGGTAGCATGTATAGCCCCACCGCCAAGGGGTCCGGTGGTAGGCACATACGCG
CACTATGTCCGTAACTTAGAATTTTTTTATAGTAGGCATGCAACCCTACCGCCAAGGACT
TTGGCGGTAGGTTGTTATACCCTACCGCCAAGTGATTGCACCTCTGGGTTAATTATTTCA
CTCGAAGCGAAGGATAAAAGTGTAACACGAGTGCTATGCATGTATGAGCAGGTCCGCCCC
ATAGGTGAGTGAATATCGATTAGGGTGTTACAGTCCCTGCCGTGGAAGACAGAGACATTT
AACTAGAAGAAGAAAAACATTTTTCGGAATATCTAAACTCAATTTTGTAGTTTTCATAAT
AAACTGCACATGAGGGTATTTTAGTATTTTCATGTGGCTCCACTGAGTTAGCACTGTTGT
ACGTTCAAGAAAAAAACGATGGTAGAAGCTGAATTAGGAGTAAGGCGACATGGCGTTACA
GTCTCTAGCATGTAATTCTTTGATAACAGGTTCACACCCTCGCCCGTTGGATTCCAGAAA
ACTGTAGAGATCCATCACATGATTTTCAGCACATAAAGTATAGTTGTGACATATCTGAAC
AATAACATTATCTCCATCAATCAATAATGAAGAACTGAAGTAGACGTCACTGAATGCATG
AGTGCCACCACCCCCGTTGGTGCTCAAGCATTGAATGCTGACATGAAAAGTCTGAGACAG
AGTTTGGACGCACCGACGCACGTCGCCATTAACTCGTGGTTGAGGCAGAGAGAGAGACAG
AGGAGCCAGCGGGTCTCCCGTGTGGCCGTCGTGTCAAAGACTGAAGAGAAGAGAAGAGCT
GGGCCTTGAATAGATCATCATGGATATCATTCGGTTCAAAAGGACAGCGGGTTGGGATTG
AATGAAGACATGGAGGGAGGGATCCAACTAATGCAGCTCATGATGCCATGTCTGCATGAC
TCGAGTAAAAGTTGGAAGAAAAAACAGTTGGTTAGCTAGGCACTGTACTGTACTCCGGTG
GATAGTTACTTCAGGTTGAAGTTGAATGAACGATACGGACGGACCAATTCGTCAGTGTCA
GTGCCGGCGAGTGCAGTGCGCGTTTCAACTTGAGAAGATTATTTACTGCGGTGCTTTTCA
TTTACTACTACTGTTTACTGTGCGCAAATCTACCGGCGCACAGTGACGGCGAACACGGGT
TGGTTTACTCGACGAGGGAAGCGACAGAAAAAGGCAGAATCTTGGCGATAGAATACTCTG
GTTTGTTTGTTGGATCGGGGAGTGGAGACTCACAGAGGAAGTCGATGATGAGGCGGCCGT
CGCAGAAGCGGCCGGTGGGGCGGTGGAAGAAGGCGCGGCCCTCCGGCGGCGCGATGCGCC
ACCCCTTGGCCGCCGCCATGCCGCCCGTGTCGGAGTTGGAGTCGCCGAAGTTGAACACCA
CCGGCCGGGCGCCCGGGCCGCAGCTGAACCCGGCCAGCGCCGGCGACGGCGAGAGCGAGA
GCGCCAGCGCCAGCGCCACTGCCTGAGCGAGGGGAAGGGCTGGGCGTGGCGCGCTGCCGC
CTGCTGCTGCTCCCGACATTGACGACCTTGGACCTCTGTCTCTGTCTGCCTGCAGCATGT
GCCGCGGCGTGTCGCGTCCCTCTCACTTTTCTCTCTCTCCCTCGCGAAGCGCGGCGTGCC
GGATTCTGTGAGGTCATGCGCCGCGTATATGCTCGTGGTGGGGCTGCGATGGATGGATAA
CTGCTCGGAACTGGGCCGGGCCGGGCCTGCACGGCACGAGGGCATCGTGTGCATCGGGCC
GCGCCGGGCTCGCCCCACATGGCCTGGTCAGCCACGCTTGGTTGGTCGAAATCATTAGGC
CTTGTTTGGTACTAGTGTTTTTAAGGAGATTGGTGAGGATAATTCCTTAAGGCTCTGTTC
GGTACAGGTGTATTTTCACACCCAATACGCTTGGGGATTGGAGGGGATT