Map Locations of contig_45798 (9649 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_45798

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61713 2 2581 bp AK374531 Available Available None
MLOC_61715 2 1109 bp None Available Available None
MLOC_61714 1 477 bp MLOC_61714.1 Available Available None





CDS Structure of MLOC_61713






CDS Structure of MLOC_61715






CDS Structure of MLOC_61714






Contig Sequence (9649 bp)

>contig_45798 9649 assembly3_WGSMorex_rbca.fasta
CGCGCGCAGCGGCCCGGCCCGGGGGAGGGGGGCAGGGGAGGGGGGGGGGGGGGGCGGGGG
GGGGGGGAGACACCGAGCCGGCGCCGGTGGTCGTGATGCTGCCACCGAGCGGGCGCCCGC
CCGCTCCCGGGTCGCCCACGCACGCCACCCGGAGCCACCACAGCGCCGACCTGCCGGCGA
GGAGCCCGAGGCGGACTCGCCTCGTGCACGCCGCCGCGTCGAGGCTGCTGGAGCCGGGGG
CGCGCGGGAGCTCGAAGGCGAGCGCCCGGCTGCAGGCCATGGCGTACGCCTGCTCCTCGC
CGCAGCACCGCGGCCACCCCGGCGCCCCGCAGCAGAGCTGGGGCACGCTCGAGATCGACG
ACTTCCTGTCTCGCTCCGACAGCCTGTCGTTAGAGCGTCGGGCACCTCCTCCTCCTCCTC
CTCCGGCGGATACAGACCAACGGGGCAATGCCGTCAGTTCCCGCTGGCAGGAGGCAGACC
CCGTCAACACCATGAGCGGCACTGCTGCTGCAGGCTCAGTGACAAGCACTAGTCATACTA
TTGTGGTACCAAGAGTGGATTCCTACGATGCACACATGAGTAGAAGCAGCAGCTCTGATG
TGGATGCAATGCAAAGAGATTATAGGGCAAGAACTGGGGGAATGGGCAGTTATGCCGGGG
TCAGATCGAGCAATGCCGGTGCCGGCGCAAGAACCGGAGAACAGAGGCTGTCGCGCAAAC
GGGGCGCCTTGTCTAGGCCAGATGTTCCAAGGAGTGCTGGGTCTGGGAACTTGGCTAGTT
CAACGCGTTCGATCGGCAATGCTCGTGAATCGGCACCTGCTAGTAGTAGGAGAGCAGCAC
ACAATTCTGGTAGTAGTAGTATGAGGGCACCACACAATTCTGGTCTGAGGAGGGAGTCGA
TGAGTTCGACCACCCCACAAAGAAGCACACTAAGAGACGTGATCGACCGAAATGGGTCGG
CGTCCACAAGTAGGGATACAAGCAATGCATCTGGGCAGAGGAGAGGATCACGCAAGAAAA
TCGACCATAGCATCGCAGCCAGTAACAGAGGAGGTCGTAACACAATTGCATTTTCCTCTA
GTTCATCTGCGAGACCGGTTTCCAGGGCTTCGTCAAACGGCAAAGTTTCAGAGAACAGAG
GGCTCCGAAGCACACAAGCCGATACCGGTTGTGCAAGAATGCCGGTGGTAGATGCCAAAT
GTTCGGAAGCCGAACCTTGTGCCATGGGTTCCACATCTGAGAAAGAGGAGTTTAGGAGGC
TGTTGAAAGCAAAGGTCAATGAGCTTGGTCTGTCAGATAGGGTCGAACCAAGTGATGGTC
ATTCGGCAAACTTGACTGTGTCGGTGCTCCAAGAGCTCATTTCTGCCCTTACCAATGACA
CAAACACCTCAGCATCCCAAACTAGTAACTATTCGGATTCATCAGCTCCTCTGAATAATG
CTGAGACTGTATACAATTCCAATGTTCAATCACCTGACTTTCACAAGCGTTATCAGGTCA
GTTTAAATGTTGCCTTGCTGCTTCATTTTGTCAACTTTTTATGTATTATGTTTACTTCAG
AAATGTTGATTTTGCATATCCTTCAATACTTTGTCTAATGGTAGAGACTGATGAATCCAT
GCATGGAACATTTTGTGAATTTGTAGAAAATATATTATTGGATGTTCCCTGATCTTTACT
GAAGTAATTGTGTACCAACTTGGATGACTTGCATTCATTGTATTGTGGTCAGTGGTCACA
CTATTTTTGTCTTGCTGACTATTGAAATTGAAAACATTCTCATGTTCTAGTTCCAGGATG
ACCAAGGGGCTGATTCTTCTGCTACATGCACAAATGATGAGCCCAATCAGCCGAGCCCAA
CATCAGTCCTCGAAGCATGCTTCTCAAATGATGCTTCCTCTGTTGGAAGTCCAACTGAAA
ATATCGGTAAATACTTTTGTATCATCTTGAATGTTGAACTGGAATGCAAGGATACTTTGT
ACTCTAGTTAGTAACCCCTGCAGAACTTTTTTTACTTTTAGTTATCTATAAATGAAAGGC
CTTTTATGAAGGAAAAAAAGTGTGCTACAAAATAAACTTCTCTCTTTATTTACTCGACTT
TTGTTGCTGATCTGAAGCAAAAAAATATATGTTTGTATGCTGATGAAACCTTCTCTCTTT
ATTTACTCAACTTTTGTTGCTGATCTGAATTAAAAATATATGTTTGTATGCTGATGAAAC
CTTAAATGAATAGCTATGTTTTGCATAAAATGCATTTGGCCATGAAATTGATGTTGCATT
TGGCCAAGAAATTGATTGCTTTAGTGCACATCTTGACACTGTTGCAGATTAAAGGTATGT
ATCACGATGAATTGCAAAAGAAACAACAAATTAAACACATTAAGTATCGCGAGATTGGCA
GTCAACCAGCTATGCCACGTGGCGCAAGCTGGTTTGCCGCGGTGAGAAAGCTTTTGAAAT
ATTTTCTAGATAGAGGTGAGGATTTTTTTAAAAATGTTTTTTTAGATGATGGTCAGAAAC
TCACGTATTTTTTAAATGGAGGGTTATGCAAAGTGGCGCTTGCCGGTAGGCTACGGTGGT
ATTTTTTCTTTTTCTTCTTTTTTTTTAGATGGAGGTGAGGATTTTTTTTTCTAAGATGCT
TTTTTGGATAGAGGCGAGGACCACATGTTTTTTTTAAATGACAACGTGCACATAACTTTC
TTTCAAGTGGCACCACCCTGTGGCGCCCCAACCCTAGTAGTTTACATATATCACTAATAA
GACAGTGTTCTGTTACGACGTTCTCTAGTTAACTTCACTTGGCTTAAATGGATTCTCTTT
GGAGAGAAGCTTAAAACAATTCTGATTCACAGAACGGATTGAATTAGTAGGTTTTGACGT
GTGTAATGGAGTAGATTATGACGATAATGTATGGTTTCTTCTTTTGCTTGCAGAGAGTAC
AGAATTCTTTGTTTCAATGGAGAACAAAATGGAAGATCTCTTCAATCTTGAGTCTGACAT
TGTGGATCTGTCCATGTCCATCGACACAACAAAGAGTGACGATCGCGGCGGCAGTGCTGA
AATACCATATGTTCAGAGTTCTCCAGAGCATGATTTCGCCTTCTTAGAAGGCAGGCTCCA
CAGCATAGGGGAGGCCATTGCAAATGCTGAGCTGCTCTTGGACAGTAGCCTCTTTTGTGG
GTCATCGTCTAGTCTGTCACTCCATTCCTTCATCGTCGAGATGCTGGAAACCGTCGAGGC
CGTCTTCGGCGATGGATCAGAGAGCAGCCTTGGTTTCAAGGAGGAAAACAAGTGCCAACG
CACCAACTTCCTGTTTGACTGCATCGTCGAGTCGCTGGACTCGAAGTTCCGTGATTTCGG
CAAATGCGGGTACAAGGCTTTGTTGCGAACACCTCTCACCCTGAGCAAGGACCTGCTGAA
GAGGGAGATATCTGAAGAGATCGGCAGCTGGAGCGAGATGTCGTCGGACCGGGCCACCGC
GGAGAAGGAGCTGGAGCAGGTTGTGGCAGCAAGGTGGGACCCGTGCCGGACCGAGGCGTT
CGACATCAGCGTTGCCATCGAGGGCGACATACTCGAGGCCATCGTCGGCGAGTTCGCCTT
CGACCAATGCTGCCGCTGAAGGTGTGCAAGTGTACTGGCTGGCATGACATTGGCCACTTT
ACAAGTAAACACTCTGCAGATATGTACTGTGTTTTCTCCGTGGAAGGTTTTGTACAGCGT
CATGTAGTAATATATGGACGCCCCCACCCCTGGTTATTTTCCCTTTTGTGTAGTACTGCT
GCTAAAAGTTCATGCACCGTTTTCTTTTCTTTTACCCTCGGGAGGCATTTGCTGCCCTTT
TCACTGAATAATGCAAGGTTCTTTTATGCTACAGTTGTAGTGCATATTATTTCCTCTTGA
GCAGTTCTCGCCGTAATTCCTGTAATTGTTGTCAGTTTCTCCAATGCCAGTTTGCCTTGC
ATCATATACTTGATCGATGCTGGATCTATCTCGCGGAACTTGCAAATCCATCTGAAAAGA
GAGAACACCTTTGTCTCTCAAACGCTTTAACCTTTCCGGCATCTAGACGTTGCGATCCAT
CCGTGAATGAGCTCCCACTGAGTGAGCAGGGTTGAATTTTCAATGCTTCGTTCCCTGGAC
TTGCTCGAGTTGTTAAGATATACTAGTAACTCTGCAGGAAACAGGCAAGAATCAGAGAAC
AAAACGGCGCCGGTTCTCGAAGCAGAGCAGAGCAGAGCAGAGCAATCTCTGCACCCGGGA
AAGCGCTCCTCGATGCGCTTAGTTTTAGTGCAAGCAAAGGGAGATAAGGCAACCGCGCCT
TGAAACGCTCGTATCACATTGTTTATGGCCAGCTTTTCCATGATTTGCTCTCCTCTCTGC
TACCACCTGCTGTTGCGCTCCTTCGGTTCTTCTGGTTTTGAAACAAATAAGTATGAACAA
CTGAATTCGAATGGAGATTATGAATCTGTGACGTGTGACGTCCTGCCATGACTGAAGAAT
ACCAGCACCGAATATAGAGTTGAACTCGGAGAACATTTATCAACACCACAACAAGTCAAC
AACACGGAATTTTGGGTAAATTCAGACACACGTGTGGACATGACACTACTAGAACAACAA
AACTGCGCGAGAGAAACCAAGAGCAAACACACTGTAACCCAAGGAACTGCAGCCAAGATA
GCTAGCGACAATTCTACCAATTAAGACGGAAGGCGAAATGCAGACAGGGTCGTCCATGGA
TCCGGCCGGCCTAGAGGAGGCGCGTCTGCTGCATCCTCATCTCCTCGTAGAACCTCTCGA
TGAACCGCTCCGCGCGGCCGTCCACCTCCTCGTCCCCCTCGCACTCCACCTCCACCACAT
CATCCTCCTCCTCCTCCTCCTCGCCGTGGTACACCCCCTCCTCCTCGCCGTACCCGTACG
ACGCGCCGTCCTCGCCGGCCCGTTCGTCCTGCAGAGCGCGGGGCAGGGGCAGCAGGCCGT
CGAGCACGGCGGCGTCTACGCCGTCTGCGTCGGCGATGCCGCAGCCGCCGCAGAGGAGCG
CGGCGAGGACCGTCCTGGCCCGGCTCCTCCGCTTGGCGCGCCAGGCGGAGACGCCCGGCG
GGCGGGGCAGGAGCGGGGAGCCGGACGGGGAGAACTGGTACTCGCCGACGTAGGCGTAGT
TGTAGTGGCGCAGGCGGCGCGCGCGGCGCTTCTTGAAGAGGAGCAGGCTCCTCGCCGCCC
TTGTCTTGGACAGCGGGGTGAGCGGCAGGGAGAGGATGGCCATGGCCCTGCCGAGGATGC
GTGGCGCGGAGGAGGAGGACCTCGGCATGGCCGGCCGGCGTCCTGGTCGGCTCCTCTGGT
CAGTGGTTTGGTTTCCCTCTCTTTGTCACATTCAAAATGGGGCAAGGTGGCGGATACAAC
AGTGATCGTGGTGGTGGTGGTTGCTGGCCGCGGGTGGTGGTTTTATGGTGGGCGCTTCGG
GCTCGGGCTAGCCGGTGGTGCGTGCGTGCAGGGAAAGCTTTGCGTCTTAAAGTGCCTTTA
CAGTTTGCATCTCGGGGTTGCGACGAAATCTGCGTACGTACGTACTGCTGCAGTGCTGCT
TGATGATATCTCTCAGATTTCCTGGCGTAGTACGTAAGTTGCGCACGCACGCCTCGTGAA
GTCGTGATGCACCATCACTCTTTCGGATCATAATGCAGCAGCAGCAGTGGAGTGCTACAG
CAGCAGCAGTGTAAATGTGTACGTACTAGTAAATTTTCTGGGTCGACCGACCATCAAGTC
CGCGGCCGTATACCGCGTAGCCTTTTTCGCTCCCGTTCCGTGCCTGCATACGGGCTCAAG
GGCAGGTTACGCGCGCTTGGTTGGCCAACGGCGCGATGGAGCGGAGGCGGTCGGGGTCTC
GTGGGTGGACTCGTGGGTGCCGTGGGGTCGCAGGCTGGAAAGCGTCCGTCTCCGCGCCGA
GTTGAGCCCAGGCCGGTGGCTTCTGAGCTGCCCGGCCCCTTTTCGAACCAAGCTAGCCGT
TGCCTCGCGAGCCTCAAACCCAAAGCGAACCAACCCCATGCCGCCCGCGTCACGTCCCCA
TACCCCAGCTTTCTGGGGATCTGACCTGACCGGTCCTTCGTTTTCGTTTTTCAGACCCCA
GCACGCTCGTGCTACTACTACGTGTGCCTGGTCGTACGTACGTACCACGTTACGCGATCC
GCATAAATTCGGTCGCTCGATCCGCATTCATCACGCCGGGCCATCGGGTGGTTGGTTCGT
TCCAGCGCTACAGGCTGCGCATACTGGATCTGCACCCGATGGCGCCGAACAGTCGCCATA
CGTACGCACGAGCACCACTATACTATACTAGGGCGGATGGATCGGTTCGTTCGTCAAAAT
GCGGGCGTGCACCGGCGGGAGGAGTGCCCGTTGCTTGCCATTACCCTTACCCAAGCCTTT
TTTTCCTTGATTTGGATTTGGATCTATGCGTGCCGTCCTTTGGTGGTTGTTTTCTTTGAC
TAGCGTGGCCGTGGACGTTTAGTCTGACCAGCGTCCGGGCCACCGGCGTTCCTATCTCCT
AGGCAGTGCGTGCGGGTGTGTCGAACACAAAGTGCTCTCTCGGAGAAACTCGAGCATCAG
TCAAACATACTCCTATGGCTTCTTTCTATTGGCTTGGCACAAGTGTCTGTCTGATGAACC
ATGAACTGCCAGCACATCTTGTTTTGTCGAGGGCAGCTTCAAATGGGATTGGCACTGGAA
ATCAGTCACTAATTACGTCGAAGTGGCCGCCAACTAGTGGCCGTTGATGCTAGGACGGAC
ACTGACGACGACTCCTTAACCAAGGCTATAGGGCGTAAAGCAGAGCAGAACCTCGACAAC
CAGGGTACTTCATCATCAAAAGAACATGTTGGGCGTACCTATATCATGATCATAACATAA
CAGGTCATGACGACCGAGGCGCGCGGAGGGGCGATTTCTCAGGCGATTCAGCCAGCGACG
GCTGGCAACGGCGCTGCCCCTCGCACCTCGCCGATCCGATCCGACGCCTACGCTGGAGGA
GATCAAATCGCGCCTCGAGATGAGTCGGCTGCGGCGCCCGGGGATGCAGAAGATGGCGGC
GGTGCCTCGTCGGCGCATCGGACGTGGGCGGTGTCATTCGTGGACACAACACCGTCAAAT
AGAGAGCAGAGATTCGGATCAATTGTGCTTCACCACCTATCACGCTGGATCACGGTACGT
GACGAAGAGAATGACATCCTGGCGGGCAAATATTTGTAGGATGTTGATTTCCCTAAGATG
GGAGGAAAACTGGAGATCGATGGATTCCAGATGGTTGTGGGGAACGCATGGGAGGCGCAT
CGTTCTATTCCGGAGAAGGCTCAAGTATGCGTTGATCTTACTAATGCGTCTCCTCGATAT
GGATGTCGTTTCTGGGTCCTCGCAGATCAGGAAGATGAGATAGATGATGAAGAGGACACT
GGAGATATCGGCATGGAGGAACATGACGTTGCAACTGCTCCAAAGTTCAGCGATGAAACT
GGTCGGTGCGGACCAACCATTCTCCGGCGCAAGGAGTTGTTGGACCTGCGCCTCTCGAAG
AAGGCGTTGAGGCCGATAACAGGGATTCACCCATGGTTTGGTCCCAAACCCAAGGTAATT
CTTCAGCCGATTACTTTGTCTGATTTTGTTTCACCGGCATGGATTAAGGTGAAGAAGAAG
AACAAGAAGATCAAGCCGCCTGTCAGATCGTTGGATCGGCAGACAGCGGTGATGGAGCCT
GTATTTGCGGGACGGCAGGCTAGGACTGCATTTTTGAATGATGTCAGTGCAGATTGTGGG
CCAGAGACTTCTGTTATTAACCTGGGCTTGCAAGAGTCTGGGTATGAGGCCCAGACAGCA
GCAGCTCAGGGTTACTTTTTGCCTCATGCCATCGCGGCATCTTCCCAGGTCGAGTGTAAC
ACATGCATCTCTTCGCCGCCTAGGGTACGCACCAGGGGGAAACCTGGGTTTCCTTCGCTT
GGTACTAGGCGGGCGGCTCGGCTGCTTCCCTCCGCACGTGCTTCGAAGGAGACCATGGCG
GGTCGGGGCCAGGCGCCGAGACCCTTGCAGCAGTCGACGAAACCGACGGGGCAGGGCTCT
CGCGCTGTGCAGCAGGAACCCCCAGGCAAGGTAACGGCGGCTTGAGGGGCAGAGATGCCT
CCTACGGTCAGGCAAGATGCTAATAGGTTGCAGCCTCGAGGCCGATGGGGGGGGACGACG
GGATTGATGCTTATGGTGATGGGCAACACAGGGGCTCCTCGTCTGCGGGCGGAGGTCGTG
GTTATGCTTGGCAAGGCTCTGGAGGCAGCGGAAGAGGGTTCGCTAGACCGCCGGGCAGTT
TTGCGCAGGGGGTTTCGGGTCCCCCTAATCCAAAGAGGGGGCATACCGCCCTAACTTTGC
AGGCAGAGGGGGAGGGAGGAGGCCGAAGCCACCGCTCCCGCCTGTTGCTAATGCTACCAT
GGCCGAGACGGAGGCTTTAAAGGATGCCGGGATTGATCAAGGGAAGGTGACCGAAGCACC
GCCTGTGGATAGGACGATGATTGCTGCCAAGCAAGACGGGGGAGAGCGTCCAACAAAGTG
GGCACGCAACAAGGAGAAGATGGTGTGTTACCGTTATGGTGAGACGGGCCACTTTGTCTC
TGAGTGCAAGGTTGATCTTTGTGAGATATGTCTCAGGCCAAAGCACGGTGCAGCTAAGTG
TCCCTTAACAGTTGGACCTACGTCGATGGTTAATATTTACGGAGTTTGTCTTCAAGAGCT
TATGTTTTTTGAATCGTCAACTATGGCGATCACAGTTCATATGGCAGACACTGCTTATGT
TGGGACAGTCACGGTCACGAGAGGTAACATGTCAACGGAGCAGATTGTGCAACAGCTTCG
AGAGCTTGTTTCGTCGACTTTTAGGTGGGAACCAGTGTTGATAGCAGATAATGTTTTCAA
AGTGGTTTTTCCTACCAATGAGGATCTTGCACGACTACTCAAGTTTGGCATGTGCAGAGT
TCCAAGTACGAGTTGTGTACTAGAGTTTGATGCTTGGAAGACGGAGGAGCCTAAAGGGGT
ACCGTTACCTCAGATTTGGGTCAGATTTTCTGGAGTACCTTCTAAGGCGCTCAATGATTT
TTTGATCACTTGAAGCTTGGGATCTCTTATTGGTAAGACATAGAAGGTGGATATGATCTT
CACTCGAGCTAAAGGAGTGACGAGGTTGTTAGTCAGTGTTATAGATATCGAGCTAGCTCC
TGATGAGGTTATATGGACCCATGCGGGAATAAGATACACATTACAATTAGAGATGGAGAA
TCCTCCTATCTTCCATGATGCGGTCACAGATGGAGACGTTAACATGACTGATGGTGATGA
TGCGGCTGGTTCTAGGGGCTCAGAGGAGAAGGATGATCCGTCGAGCAGCTCGAAGAAGAA
GGATAGTCGGTCAAACAAAAATTCTGGAGGGGAAACGCGTTCAGTTCTCCCGCCGATGTC
CGAGCTTAAGTTTGGCTCCTTTGAGCCGGCATCGGCACCGGATAGAATTAGGCTGGCCAT
AGTGGGGAGTAACATAGTAGTAACATCACACATTACAATGCAAATTTGCTTATGTGGCAG
TGAGTTAATGAGGAGAGAGGTGCTTGTGGTAACTAGCTATGTTACAGTA