| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_45775
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61702 |
3 |
3867 bp |
MLOC_61702.1 |
Available |
Available |
LOC_Os01g65986.1, FRAME:+3, EVALUE:0.0, 13101.m07137 protein DUF803 domain containing, putative, expressed |
| MLOC_61703 |
2 |
1629 bp |
MLOC_61703.2 |
Available |
Available |
LOC_Os01g66000.1, FRAME:-2, EVALUE:8e-112, 13101.m07139 protein NADH dehydrogenase I subunit N, putative, expressed |
CDS Structure of MLOC_61702
CDS Structure of MLOC_61703
Contig Sequence (9691 bp)
>contig_45775 9691 assembly3_WGSMorex_rbca.fasta
AGCTGACAAATGTGTATACTATCGCCATGGTGGGGGCGAAGGAGTTTTTCTCTGTCTGGA
TGTCGACGACATACTAATATTTGGAACCAACACTACCAGGGAAAAGCCTAGCAGTAGCGC
AGGTGCCTGCGCTACTGCTTACCAACATGCAATAGAATTAGCGAGCTTTTAGAACCTGCG
CTACTGCTATTAGTTTCAAATAACAAAAAAATCTCAATCTCGTGAATGTTGTCAATGGTG
TCAATGGTTCGATCCAGCAACGACAGGGGTTGTTGGAGGTGCGAACGGGCAGCGGTAAAC
CAGATCCGACGATGATTGTTGGAGAGGGACCGGATCCAGGGCAGAGCAAGACGTTGGTGT
AAGGATCCTCTTCGCGGCCAAGGCAGATAGTTCCTGGTTGGCCATGTTGATGACCTACAC
AGGCATGGGCATATGAGGTGATTAAAATGGGGGGAAGAGGGAGAGGGAAAAAGAGAAACA
AGGTAGAGAGTGGAACGAGATGGAGCGCACATCGGGTCTGGTCGCCGGCGGTGAGGTGCT
CCATCGTGGTGGCATGAAGGCGAGGGGGAAGACAGGTGAGCTCCTGGACGCCAGTGACGC
ACAGAAGCGGCCTCGTTCGGCGCCATGGAGTAGGACGTGGGAGAGCCTATGGAGAGAGGG
GGAGAATGATGGAGAAATGAGGGATTCGGCCGAGGATATGGGGACTTCACCTACCTTGTA
CTTAGTAGTAGTGAGGGGTATAAACCTGCACTACTACTATCAACTTAGTAGTAGCACATG
TTTATACCCCTCGCTACTACTATGGCATGTCCCGGGGGAGCACGATAGAGACCACTTAGT
AGTAGCGAGGAGTATAAACCCACGCTACTACTATCAACTTAGTAGTAGCGAGGGGTATAA
ACCCGCGCTACTAGTAAGCGTCTACCTATAAGATTTTCCCTAGTAGTGCAAACTTGATTA
AATCAAGGAGGTTAAGGATTTCTTATCTTGTTGTTTTGAGATGAAGGATCTAGGAGTAGC
TGATGTTATCCTGAACATCAAGCTGCCGAGAGATGAGAATGGTGGGGTTACACCGAATCA
GTCCCACTATGTGGAAAAGGTCTTGAGTCATTTTGGGTATAGAAACTACAATCCTTCTTC
AACTCCATATGAGGCTAGTGTGTTGTTTCCAAAGAATCGACGAATTGCTAGAGATCAACT
GGGGTATTCTCAAATTATTGGCTTGCTTATGTATTTGGCGAGTGCCGCGAGGACTAACAT
CTCGTTTGTTGTAAGCAAACTAATCTGGTTTGTATCAAATCAAGGAGATGATAATTGGCA
TGCGCTTGAGAGAGTTATGCGCTATTTGAACGACACTTCGAGCTATGGATTCACTACACC
GGGTAACCGAGGGTACCGGAGGGTTATAGTGACTCAAACTAGATATCTAATGCTGGTGAG
ATTAAGGCCACAAGTGGTTATGTTTTTACGCTTGGTGGTGGTGTTGTTTCCTAGAAGTCT
TGCAAACACATCATTTTAGCGAGGTCAACTATGAAAGCAGAACTCACAACATTAGACACA
ACCACTGTTGAAGCAAAGCAGCTTCATCAGCTCTTGATGGACTTACATGTGGTTGAAAAA
CCAATTCTCGCTATCCTCATGAACTCTGATAATGAAATTTTGATCATCGAGATAAACAAT
TCTTATGACAATATGAAGTCATCACGTCATGTGAAGAGGAGATTGAAATTTGTCAGAAAA
CTAAAGAGCTCTGGATTTATTACGTTGGATTATATCCAAACGTCTAAAAACTTAACATAT
CCCTTCAAAAGGGTTTATCGTGTAATGTGATAGATAATGCATCGATGGATATGGTTTTGA
GACCCACTGTATGAGTTGTCGATAGTGGTAACCCACTCTATATGACCGGAGATCCCATGG
AGTAGAAGTGGGAGACAAGTTGTTGGGTAGCTAGAAGGAGAGTATTCCTACATTTGTTAT
CCCACTTTGTGAAAATGCAATACTCTCATAATCTGCATGGCAGGTTGATACTTATCTTAA
TGTGTTCTAAGTGGCTTATTTGTGTAAGCAAAGATGTTGTCCTATAGAGCATCACCTGGG
GAACACACATATACTATGTTGTGATCTAGTGTAGCATAAAATTCTAAGTGGAAGTTCAAC
TTAACAGTCTCCACTAAACATCGGTATACAAACAATGTTTTGAAACTAAATGATGAGATG
TGACAATGATACTTTGTGAGAGATTGTTGGAATTTTCTAGTAGGCTTTTGGCCCAAAGTC
CAACAAAATTCTGAAATACTAATGGTCCTTTCATGTGTGGCGTGAGTGAGACTAATGTTT
TGTTCCATACCGCTAGTTGGGAAGGAGTTGCACCACCTTATAAGGTGAGCTCTTCTAGCA
TTTGTATGAGCATGAGAAGATGAGACCTATACGCGCGCTCCCCCCTCGCTCGCCATGCCT
CGTCACAATGCGACGCGACACGCCAGGTTTTGGGAATGAGCCGAGCCGAGGACAATGCTA
TCCATGTTGTCTATATTTGCTCCCGGGAAAATTAACGAGCCATTAATCAATAATTAACAG
AAGCATTGATTACTCAGCGGTTTTGATTTTTTGGATTGTGGGGCTGTTACCGACTTGACA
CAGGTTTACTCCACGACCTACCTGATCCGCACTATATAAACAACCAGACGTCTACCCTAG
CCGCCGTCACAACATATGGTTTCACACCGTTCTAGAACATTGCGTTGCCACACAAGTCTT
CTCCATCCCTCATTCCGCGCGTGCACCACGAGAAGGGGCATCAGGCCTCCGGAATCCCGC
CCCTCGTGATCCTCTACGGGAGAGGCGCGATTATGTTTATAGGGAGTGCACTTGCGCTAT
CGCTGGCATCAACTACTTCCCGAATGACGACTTCCTCCCCGATCTCGGGAACCTCTTCAT
CAACGACATGGGAGACAACACCAACACGTGCAGTTCTCTTCCCGCTGCACCTTATGTAAT
CTTGTCTTCTCCGTTTGAGACCGTGTTAAAACTTCTGTTTCTAGTATGGCCTTAGATTCA
ATCTATTCATCTACTATAATAGTCCGCGTGATTAGTTTAATCACTATTACCATCGTCATG
ATTTATCTACTTTTTATTCAAATTAAAACACATAGTAATTTACTCATATATTCAACAAAA
TGTACATGAAGAAATCATAGATACATGTTCTCCACTTAATGGAAAATATAGATAAGTTTT
GTACCGATTAAATATTATGTTTGTTTGACATGGCAAGTTCATAAAATATGTTGTAGCATA
TTATAAGTTGCCGTGGTAAACATGTTATGTTTGTTTTGACATGGCAGAAACACACACACC
CACACCCACAAAAAGGTTGGCATGGCAACAAACTGTGACACGAACATGGCTCGGTATCGA
ACAAGAGAAGGAGAGTAATAAAATCAAATTTCCCACGCCTAATTCCTCCATATGAACTTC
ATTATACTATAAGCTCAAAACACACACACACACACACACACTTCATTATGGTACAAATCA
TCGTTCCCTGTCTTAACAAGATTACCAAACATGCCGCAAGTATTATTGGCAAGCAAATCT
TGGTAAGCCGATGCGGCTTGCCTCGATGCTAAGCAACAGTGGCGAGCCAACCAACCAGGC
ACTGGCTAGTCCACACCACACCCAAACATATCCGCGCGGCGTGGACTCGCGCAACCTTTC
CCTTCACCCGTTTCCTCCTCGCCGGCGCCGCCGTCGCCGTCGCCGTTGTCTGCGTCCGAT
CCACCCTCTTCTCCCCTCCCACAGCCAGAAACACCACGAATGCGGAGCGCCTGCGCGAGG
CGGTCGTGACCTGGCCGGAGCGTTCAGCCGACCCCCCCGCGCGCCACGCCTCCCACCGCT
CGCCGCATCGGGATCTCGCACGCGCCGCCACCGCCACCGCGCGATCCAGCGGCGGAGCGC
ACGGCCGGGGGGAGGGGGATTCCCGGGAATTCCGGCGCCCGCGGGAGGCATGGCGGCGGA
GACGTCCACTTCGGCGGCCGCCGGCTCGGGGGGCGGGAGCTGGGTGGAGTCGTACACGGG
GATGTCCACGGACAACATCAAGGGGCTGGTGCTCGCGCTCTCCTCCAGCGTCTTCATCGG
CACCAGCTTCATCGTCAAGAAGAAGGGGCTCAGGAAGGCCGGCGCATCCGGCGTCCGCGC
AGGTGACGTAATTGCGCTGCTTACCATCGAGACACCATTGCCCTGTCTGTCGATCTCCTA
GCTGTATTCTATTTGTTTGCCCTGCTTGGTGCTCTGATCTGAGCTGAAAGACGCCGGTGT
CTGATTATTACGCTTAGATCCCATTCCAGCTGAAATCCATGTTGGAACAGGATATATGTA
ATGAACTTAGGGATAGGGTGACCGCGTCAGAGTTTAGGTTGTGATATTGACAACGATTTA
GATACTGGGAGTTTAGGGAGTTCACATATGCTGGAGTTTGTAGCCAACGGTGCCGTAATA
ATATTGACTATTGCTTTTATTCTGCGTTGTTCGTTACGCGTTACGCGGGTGCACCGTAGT
CTGGTTCTCATCTCATTGTTCAGCCTATTGAGTGCATTAATTTTAGACGTACTAGTTCAT
TTTCGTGGAGAATGACCTCACTAGTTAATTCTTCCAAATACGGTAAAAGTTATTATTCTG
CCATTTTCATTTTTTAGAGCTGTTCGTAGCTTGAAGTATGCGCAGAGCAACTACCAAAAT
TGGCCAGCGCAATGGTTTCGAAGATTTTAGTTCTTAAGCTATTTAGTTCTGTTCACCTGG
ATATTCTTCTTATAAGCCGAAAACAGTTTGTTCTCGCTGACAGGTTATGCACAAATTTGC
TGTTTATGGCAGGGGTTGGCGGGTACTCTTATTTGTATGAACCATTATGGTGGGCAGGAA
TGATTACAAGTAAGTTCACCTCTCTGGTACAACTGGATCTTCATGTTCTGCTTCTACTTA
ACAATGTGATCTTGACAGTATTCTGTGCTGTTTCCCAGTGATTGTTGGAGAAGTTGCTAA
TTTTGCAGCATATGCGTTTGCTCCTGCTATACTCGTCACTCCACTTGGTGCACTTAGCAT
CATCATTAGGTAAAAACCAGAAGTGTGGTCTTTAATGGTAAATCTTGAGATGTTCAGCTG
CTGACAGTTATGGAAGACTGTGTTCATTCTAACGTATTTCTCTCACAGCGCCGTTCTTGC
AGACATTATGTTAAAGGAGAAGCTACACATCTTTGGTATACTTGGATGTGTTCTTTGTGT
CGTGGGTTCAACAACTATTGTGCTTCATGCCCCTCAGGAGCGCGAAATTGAGTCTGTTGC
AGAAGTGTGGGATCTTGCTACAGAACCAGGTACTTTCCTTTCTTTCCCTGATTAGCAACC
ATGCTTTGCATATTTGTCTGATCAAGTACTAATGTTTTTGTATTTGTCTTGCAGCATTTC
TACTTTATGCAACGATCGTGCTTGTTGGAACTTTTGTGCTCATATTCCGTTATATCCCAC
AGTATGGTCAGACACATATCATGGTTTATATTGGTGTTTGTTCACTTGTAGGATCTCTAT
CGGTATGTGTTCCATGTGCGAATAATTATCTCAATGTTTATTCACGTGATACTGTTGATT
GATTATGCTGGAATTTTGTTATTTTTTTATTTACTTGACAGGTCATGAGCGTGAAAGCTC
TTGGTATAGCCTTGAAGCTGACCTTTTCTGGGATAAACCAGCTAATCTACCCGCAGACAT
GGTTGTTCGCAGTTATTGTTGTTGCATGTATTTTAACACAGATGAACTATCTGAACAAGG
TAACAATAATTTCTTTGCCGATGGTTCTTCCATTGCTTAGTGATCGTACTTCAATATCTG
CTAAGCAATTTTTGTACCGCAAATTATCAAATCTTTAATCTGCCATAATGGGCACTGGCA
TGCTATTGTTTGATATTATTATCCGAGCACATGATTCTGCTTGTTACAAACTTATCCTTG
GTGTTTTGTACATCATTCAACCTACCATGTTTCTTTTGCAGGCTCTTGACACATTCAATA
CGGCAGTTGTTTCACCAATATACTATACTATGTTTACATCACTAACAATATTGGCTAGCA
TCATAATGTTCAAGGTAACATGTTTGGGCTTGCATATTATTTTTATGGTGCTCTAGATGC
TGCTTCTTAGTCTACTTGTGTAATTGCAAGTATAACATTAGATCAAGTAGTGCTTGCTTA
TACTAAGTATGCAGTGAACTGCTTTTAGAGCACCATATTTAATCGCCGCTTGCTGAAGTG
CCCTTTTGGCAGTTATCTTGTCTCACCAAAGTTGGACACAGTGATTGAATGGACTCTGAG
TAAAGGGCAACTGGGCAACAATGTTACCCAAACATGTCATTGCCAACAAATTTTCTGTAG
GACAGAAAATTAGGCATTATCATTTTATTATCTGAAACTGAACTCATCAAACCAAGGGCG
CACCTATCATGATCTATGCCAGATTATTGTTTTTAAGTCTAGGACAATCCAATTATCGCT
TCTTGTCATCTGGAAATGACAGTTTAACTTTGTAATTGTCTTTTCAGTTGATTTGGCTGT
TGTACATGGGGCTACACAACATTTGTAAAGCTTATTTAATCAATAATTCATCTTCTATTT
TCAAGTCATTTAGTCAGCACTCCATAATCTAATTTCTAGTGCCTTGGTCAATATTATGCC
ATCTTGAGTTTGGCCGTCTAGTCTGTAAATTATCTAACACATGTTTGTAGTCAACAAATT
GTTCTGTTCAACTTGATAAACCACCTGGTTTTGTCTCATAGAGTTAGTGACAATGCTCAC
ATATCTTATACACTATTAATATACTTGCTTGCAGGACTGGGATCGTCAAAACCCGACACA
AATTGTGACAGAGATGTGTGGTTTTGTCACCATCCTTTCCGGGACATTTCTTCTTCACAA
GACTAAAGATATGGTTGATGGTATGGTTTCACTCCCCCCTTGTTCTGGTTTGCACATAGT
AATATTATGTTGGTACGTTCTAACTTTCCATCATCATAGGCCTCCCACCGACTCTGCCTA
TCAGGATTCCGAAACATGGTGATGAAAACGGCTACGCGTCTGAAGGAATTCCTCTTAGAT
CCGCTGCTGAAGGCCTCCCTCTGAGGTCACCAAGGGCAGCAGAATAATTTTGACCAACTT
GAAATGCTCAGTTATCCTTGTGGCCATGGTTGGCATTCTTTCATTCTATCCAGCCTGTAG
ATTGTACTTTAGGGCTCTAAACAGGAAAAGGCTCGTTCCCCCTTGTAGTTTTGGAGGAAC
CGGTAGAGTATTGGGGATATATATGTCTTATACATCAAGAGTTTTTCATGTTTCTTTTGA
GGAACCGGTATGGTATAGTATTGGTGATACATCTTATACCGGCTATCATCTGTAACTGTT
GTATTATTTGAAAATAGAGAAAGAATCTGAAGAACTCAAGTACCATTGCTTCTTTCACCC
CCGTTGAGTCTGCACATTATATTTTCTCATAGGCGGTAATGTTCTTTGCTTGTGCGTGAT
GGCAATGCCCCGTTTGCCTCGCTGCACTTGCGAAAGCAATCCTTTCTTCCATCTTCAAAG
CCATCAACACCGAAAGTCAGGCAGATTCTTTTCAGTGCTTGCTCATTTCAGCCCTCTCTT
TTAACTAACCCTGTAACCTTCTCGTCTCATCAAACCCAACAATCTCACACCCGCCTTGCA
GAAGCAGTATCAATGGCTGAGCAAGAAGGAGAAGAATACAAGGTGCTGATTGACCAGACC
AGCAAAGACGCCGGTGAACCGCACCAAGACGCCGACGATGACGACGCCGATGACACCTCG
AGCTTCATCCTGGTTATGAACCTCGTCCTCAGCGGCACGGCCCGGCTCAACGTGCTCCTC
CCCACGGCCACCATCCTGACCTTCGCCATCTTCGCCCCGCTGGTCACCGACGACGGCAAG
TGCGCGCGCGTCAACCGCGTGCTCACCGGCGCGTTCGTGCTGCTCTGCGCCGCCTCCTGC
GTCTTCTTCACGCTCACCGACAGCTTCCGCTCCGCCACGGGCCGCCTCCGCTACGGCGTC
GCCACCCCGACGGGCATCGCGACGTTCTGCGCCGGGGGAAGCCGGAGGAAGGCGCCCAGG
GAGCCGGAGAAGTACAGGCTGCGGTGGTCGGACCTGTTCCACACCGCGCTCTCCCTGGTG
GCCTTCGTGACCTTCGCCGCCTCCCACCACGACATCGTCCGGTGCTACTACCCCGGCGCG
CCCAGGAAGGTGGTGAACACCGTGCCCCTCGTCGTCGGCTTCGTCGTCAGCCTCCTGTTC
GTCATGTTCCCTTCCAGGAGGAGGGGGATCGGCTACCCGTTCCTTCTCAGGACCGACCTC
GTGTACCTACGGCGCTGAACATTTTGGCGACCTATGCAGTGGACCTGAACCCTGAAGTTG
AGGCCTCTCCGGCCCTGTATCGGAACTCATGTGAGCTTGCATATATGATTTGATTTGTTG
GATATGTGTATGTTTGAAAGGTGTTACAAGATTGATGATTGTCTTGTGGAATTAACTGAG
CCCAGATGTCAAATGTATACGTATGTACATCATTGTCCTCCTTTAGTAGTACACAAAAAA
GAAGAAGCTGAAAATGGAGTGTAAGGCGAGAGATGAGACGAGGCAGCTGCCGGCCGGACG
GTGGCTCCTCATTCCTCGGCGTCCGGGTCAGGCTCGAGGCCCGATATTTGCTTCAGCGGT
TTCCAGATGAATTTTCTCCTGCATCAATCAAACCGGCTCGGAAGTTATTCACGGGTTCTG
GTGCATTTGGGTGAGAATACAGGTGGAGATTTGCGTACCAGTTGCCGCATTCCGCGATCA
CCCTGACTTTGGGGCGGAGGTCGGGGAGCATGGCCAGGAACTGCAGCTCGGCCTTGGACA
GAACCTGCAAACGGAACGAACACGGGAAAACGATGAGAAAATTAAGTGTGAGAGCGGCCA
GTGAGAGTCTGAAAGAGACCTTGGCCTCGTAGACCCAGACGATGAGCCCTTTGGCGTCCG
GGTGCAGCAGGCTGAGCCTGTAGTCCACCTCCGGCGGGAAGTACCACCTCGCCACCGGCT
GCCTCCCGAGGCTAGGCTGCAGCAGGAAGGAAGCATGGCACCCCCAGGTCAGTCAAGCAG
AGCAGAGGGCGTTAATGGCGGCGAGAAAGGAAATGCAGCGATCGGTTGTGCTGACGGACC
GGGCAGACGGGGTGGATCTTGGTGAGGGTGGACTCGGGGTCGCCGAGGCCGCGCGCGGAG
AGGTCGAGGAAGTAGTAGCCCTGGTAGCGGAGGCGGTTGAGGTAGCGGCCCTCGTAGCCG
CCCTCGTGCGGCGGGTAGATGGCCAGCGCCTTGTGCTTCTCCACGTCGTCCAGCCACCGC
CCCAGGTCCGGCTTCACCAGGTCCCCGCCCACGAAGTCCATCAGCCCGCCGCCAGCGCGC
ACCGACACCGTCGACGGCCGTCCCGCGCCGCGCCGCCCGGTGAGGGACGTCGGCGCGTGC
AGCGGCGGGGAGACGCTGCGCGCCGCCCCCCCCGCCGCCCCCCCCCGCCCCCCCCCCTGT
TCCCCCGCCCCTCCCGCCCGCGCGGGCGTGGGGGCCTGTGCCGCGGCGGGGGGCGGGGGT
GTGCGGGGGGGCCCCGGCGGCGGGGGCGCGG
