Contig Data
morexGenes
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Map Locations of contig_45684 (8603 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_45684

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61616 2 950 bp MLOC_61616.2 Available Available None
MLOC_61615 1 653 bp AK365087 Not available Available None





CDS Structure of MLOC_61616






CDS Structure of MLOC_61615






Contig Sequence (8603 bp)

>contig_45684 8603 assembly3_WGSMorex_rbca.fasta
AGCGAGCGACGGGGTTTGGGCCAGCCCGTTAACACTTTCACCGATCCCAGTTTTGAGAAC
CTTCTAGAGGTTTTTAGCTGATTTTTTTCGGTTTTGGGAACTTTCTAGAAGATTTCGAGA
CCCGGTTTTTCTTGTTTTTTTCGTTTTCTTTTTTCTTTATTTTGTTTTCCTTTTTTCTGT
TTCTGTTTGGAAAATGTTCTGGATTATCAAAAAATGTTTCAGAATTTGCCGAAATTTGAA
AAAATGTTCTGCAATTTGAAAAAATGTTTTGGAATTTTAAAAATGTTTTGGCATTTGAAA
AAAATGTTCCGGAATTTGAAAAAATGTTCCAAAATTTGAAAAGTATTTCCGAATTTGAAA
AAATGTCCCGAATATTTAAAACATGTTCCAAAATTTGAAAAAATGTTCCAGAATATGAAA
AAATGTTTCGAAATTTGAAAATTATTCCAGAATTTGAAAACATGTTCCAGAATTTAAATC
GTTTTTCTGAAATTTGAAAAATGTTCCAAAATGTAAAAAAACATTCCGGAACTTTTAAAA
ATTTCTGATTCTTTTTAAAAAAAATATTCTGTATTTTTATAAAATGCTCTAGATTTTCAA
ATAATGTTCTTCAAATTCGTATAATGTTTTTGGTTTTTAGTAAATGATCTGGATTTCCAA
ACAAATCTTCAAAAAGAAATTATCATTTAAAAATGTTTCAACAATATAAAGAAAAATTGT
GCTTCCAAATTTGTTCGCATTTTTAAAAAAAATTTCACAGTTTAAAAAATGTCCATGTTT
TTAAAAAATAATTGGGAAATTCAACTTTAGTTCGTTTTCATAAAAAAATGACAAAAGAAA
AAATAATAAAAAACGAACAAAAAAAGGAAATAAGCAGAAAAGGAAAAAAAGAAAAAAAAA
GAACTGGGCCGGCCGCGATAATCCCCTCAAAACCCCCTCAATCCCTTCCTGCCAAACGAG
GCCTCAGGATCCATCCTTACGTTTCCTCATTCCCTTTTCAGTTGATCGAAATCGGATCTG
ACGGAGCCCCGGCAGCCAGTCGCCATGCCGGACAGCGAAGGCGCGACCGTGCTGGACGAT
CTCCCCGAGCAGTTCGTTGTGGAAGAGATCCTCTTCCGTTTGCCGCCCAGGGACATCGTC
CGATGCCGAGCCGTCCGCAGGTGCTGGCAAAGTGCCACCTCCACCGATAGGTTCATGCTC
GACCACCACCACCGCCAGCCCTTCCTCCCGATTCTCAGCCACGACGTCGAACCGCAGAAA
GCCAGCCTCTTCTTGTCCTTTGACGCCGATGCAGGCCAGCAACGGCTCTGCCCCGTCATC
CGGACCTTGTACTCCGGTATACTTCAGGCTACGTGTGATGGCCTCCTCATCGTCTCCCAC
GGAGCCACGGCGCATGAGTTCTTCATCTGCAACCCGGTCACCCGCAAGTACGCTCCCCTA
CGGACGCCTCAGAACCTACCGGGCTTTTTCTACCAGATTGTCGGCTTCTATCGGCACCAA
CCATCCGGCGAGTACCGAGTGCTTTGGGTCTCTTGTCCGCCATACGAATACGACACAAAT
CACAGAGCTTTTTACTCTGTCATAGCGGTGGGATCCAATTATACAAGACACATCGGACAA
GGATGCATCCCACAACCAGCATCGCCGTCGCCTTCCTTAGAATCGGCGTTACGCGAGGGC
CTGCCCGGTTCGTCTGCCTATCCGCCGATCCACCACCATAGCAGCTTGCACTGGACACTT
GTAAGATACGACAGCTGTGACACCGGAAACATAATGGTGTTCAACACAACAGATGAAACA
TTTCGGTTGATGTGTTGTCCTGCCCAGTTGCCCCCGCAGCAGTTGTTGTTGGAGATGGAT
GGCACTCTTGCATTGTGTGGCATCAGCCATGATCGAGTCACCATAGATGTTTGGGTGATA
CAAGACTATGACACTGAAGCCTGGTCCTTCAAGCATCGGATTTATCTGTCAGGGATGGAT
GGGTCACCATCCGTTGATTTAAATGTTCCTAGAATGGCTGTGCTCAATAATGGTGAGCTG
CTGATCCAGTTCGCTCCTACGCATGTGGTGCGCTGTGACATTGATGGGAAGTTTGTAGAA
TATGTGAAAAGCGAAGAGAACCAAGACAAGAACTTGTGGCTTACCAAGCATCGCCTCCAA
GAGAGCCTTATTCCCCTTCCATTATCCAACGAGAAGCAAGAAGGAGATGATGGCAGTCAG
AGAAGAAAAACGCTGTCTTAAACATGGTTATTGCTGCCTCCTTGCGGAGTATCTGAAAAT
TGATAAATGATTTTTGTTTTTAGGGACGCAAATGGAAAAAATGTGAACTGCGTCTTTGCC
CAGCTCAGTTTTCATTTGCAGCAATGGAAAGTTCTCTGCATCGACACTCAGGCTGCTTTG
CTGCTAAGGTGCATTCGTCTGCTGGACAAGAAAAGAGGGGAAGTGCTGAGGATCGCCTGG
AGATGACCTGGGAGCTCCAGTAAATTGTAGTTGTCCTCTTCTAGTCGTTTGGTCATGTAA
TATAGATTTGGCTGGTGAATGGGGGTGACTTTTCTCTTGTGTTGGTTGTTTAGTTCCTAG
CTGACTAGGAAGGTTATCTTTTTAGTTGTTTGTCATGGATATATTTCTGGTTTTGGCGAT
ATGCCTCATTTAATAAAATGGAACAGGGGGGAAACCCCTTTCTATTAAAAAAAAGGAGGT
GGTGTGAGTGTGGAGCGGCCGCCATTCTTCGTAGGGCTTTAGTTTGCCTTGCTTCATCTG
GATGTTTAGACTCCTGATTTGCAGCCCGGTGTGAGAATTATTCTAGATAACGTTTGTCAT
TGCTCTTAGTTCTTCTTTTTAGTAGTACTAGTAGAATTAAACATTTTGGATGATTCAGTA
TTATGAAACTGCTTCTGCCCACCCAAATTGTGACATCATATTTTTCTCAACAATTACACT
GGCAGCTTGAGCAACTGCGCAACTTCCCTGAAATGGTACAACTGTTGCGCCAATTGGAAC
ACATACAGAATTCTGATCCCTCGTTTCCTTTCCCTGTTTCCAGAATAATCGAACAATATG
GTTATGCTTACGGTAAAGGAGCAAAGGAAATTAGCAAATTATCTCACATTTTACTGGACT
CCACTTGCAGACACCATACAACAGATAGATACCATGTGGGATCTGATGTGGCACCAATCC
ATAAACAGACATTTATGCCACGTGGCGAATGTTCTCTCAACGCCAGGTAGTCTGTTATTT
TCGCGCCCTTCGTCCATCATGTTCTGTAAATTTGTAGTCACATACTCACATTTACTGTTT
GGATCAGCAGCTGCAACTCATGTTGTATGAAGTTATTATGAGAAACCTTGGAAATATATA
TGTGGCATGTCAAAGTTCCTCACCGAATCATGGTTTTGCATATTCTTCCTTTTTGAAAGG
ATCATGGTTTTGCTTTGGTTGTTGCTTGTGGATGTAATGGATCAACAGTGCATCATTTTT
TTCCACTTCAGCAGTAGCCAGATTTGTTAATTTGGAATAGTTCACTGTACATTTTGAGAC
GAATTATGACATGGAGGTGCAGAGGACTTGTTCACACTTGGCTGGCACTTGATCACAGAG
CATCCTTGTTGGTGAAAACATTGAGCTGAACTCTCAACTGAGAGCCTGTTCGGATTCACT
CTGCTCCACAACTCCACTCTTGGAGCGGACAGAGCACCGCCAAACGCTTTAACTCCACAA
AGTCGGAAGCGTGGAGTGGAGCAGTCTGTAGTTCAATTTTCTGGAGCGGTTAAAACTGAG
CTCTGCAGATCCAGAAATTGAAGGAGTTTGTGGAAATTACAAAAACCTGCCACCGCTAAG
TGAAATATACCGGTTCATGCGATCTCTCTCTCTCTCTCTCTCTCTCTCCGGCTCTTACGT
TCCGCTTCATAATTTTTCTAGGCCAGCTTTTCGAGATGAAAAACCCAGTTAGCGAAGGGA
GTCAGAGTTCGGCTGCCGAACACGTTTTAGATCCGAAAAATCTCAACGGGAGCGAGAGCG
AGCAAGCGGAGCGCGGATTTGGAGATTTGGAGGAGCTAGACTATTGCCGAACACGCACTG
AGTAGACTATGCTTTATGTATAAGACAATATCTTGACCTCCCAACCGTTGTGGGCAAGAT
CATGAGTGGCACTTTTGAGCACATTGGGGAGCGGTCGAGGGGCAAGATGTGAGGATGGTG
AGAGAAGCTTTTTGCCTTTGCAGGACGGGAAACACTGCTAAAACCCATCATTCAAGCCAT
CCCAACATTCAGCATGAGGGTCTTTCTCTTGACTAAGAAGGTTTGTAAGAATCTCACATC
TTGCATGGCAAAATTCTGGTGGAGCAGTTCGATAGACAAATTGCATTGGATTTCTTGGAA
GAAATTGCAACACCGAAGTGCCGAGGTGGCATGGGTTTCCATGACCTCCACCTCTTTAGT
CTAGCACTGCTCGGCAACACAAGGATGGCGTCTGATCACCAACCCCAACACATTGTGCGC
CAGAGTGCTAAAAGGGAAATATTACTAACAGATTTTCTACAAGCGTCACATTCAAGTTCA
TCTTGAGCTACATGGCGAGCTATCATGGTGGGAAGGGAAGCTTTGCTCACAGGCCTCATC
AAACGAGTGGACGGCGGATCCACCATCTCCATATGAGATGACCGGTGGATGCCGGCAATA
GAGACCTTCACTCCTACATCTAGACCAACAGATGCAACTGTGACAATGGTCAGTGACCTA
ATTGATACGGACAACTGGACATGGAGGCGAGATCTAATTCGTGACATCTTTTCACCCCGT
GATGCGGCAGCAATTTTGAACATTCCCTTGAGATCAGGTGGGGGCGAAGATTTTCTAGCA
TGGGCACATGAAACTTCAGGCAATTATACCGTTAAATCAGCGTACTGAGCTCTAGTGACT
CGCAATGAGCAGCAAGCTCCAGAGGAAGGGCGGGTTACCGGATCTTCATTCGATAATAAA
CGGCTATTGTGTGAGCCTTGGAAACTAAAGGTTTTATCTAAGGTGAGGGTCTTCTTCTGG
CGAGTATTAAGGGGCATACTACTTGATGAATGCACCCTGCTACATCGCCATATTAGACAG
CAAAGCACATGCAAAGTTTGCTTGATCCATGATGAGGATCTAGAGCATGCACTATTGAGA
TGCACTCATGCACAACAATTCTCGAATGAGGCCCATCAGCTGTTTGACTTTCAACTGCCA
AGTCTCAACCCTCTCACTTTGGTCCAAAGACATCGTTTGTGAAGACATCCTCACTTCGAG
GGATCGAGCTATTATTGTTTCGGTTATGTGGTCTATCTGGCACTCACGGAACATGCTGAC
TCATGGGGAGGAACAACTTGATCCGGCGAACTCAGTTCACCAAACCAGGGAGGCACTCGC
ACTCCTGGACATTCCCCGCCACCACGCGCTGGTGTTGCCGGGCCATGGCTGACGACCTCC
TGAATCGGGCTTTATCAAGATCAACACAGATGCTACTATCAAGCGTGAAGATGGTAGGGG
TGGAGCGGGGCGGCTCGTTCTCCAAGCTCTTTCCTGGGAGGGTTATCAACCTTTGGACCA
CTCGTCACGATTCTCAATCAGTCGTGGCCCCCATTATGTTGGAAATTCGAGAGCTTTCTG
CTAGTTTCAACTCATTTGTAATTCATCATAATGTAAGATCGGCCAATGATCCTGCTCATG
TATGTGGTAAGCATGATTGCACGATTGACATGACCGAAAGCTGGATCGATAGTACTCCCA
GCTTCGTGATCAACAGCCTTTTGACGGACTGTTGAACGAACGATTTCATTCAATAAAAGT
CTCAGTAATTTCCTCGAAAAAGAAAAGAACTCCTGGAAAGTACACCGCTTACCCAACGAC
ACAGCCGTATCAAACCGGAGCCGCTATCGTATTCGTGCCCCAAAGTCAGTCGCCAAACCA
AAAGCCCCCGCCAACTCCCACGCGTCCAAATCAGCCAACTCCCACACGACGGGCAAACGC
GTCCTCCACGCCCGGGTCTAGCCCGCTAAACAAGCCCCAAGGGGGGACACACACACACAC
ACACGGATGCTTGTGGTTGCAGCAACGGGCAAGCAACGCATCATCCGCAGCCGCCTAGCA
AAAGCCAACCAAACCGAACCGAAAGTGCAGGGGCGGCGGCCCGGCACACGGTGCGGATAC
GGCCCGGCCATGGTGGTGCCGACGGGTGCGCGCGCGGGTTGGTGGAGGCAGTTATGCGTC
GGGTAAACGCGGGCGCGCACGGCACGGCACGGCTGGACCAGCTAGCCTGGGAACAGGCAG
CGGCCCCGCGTCCCCGCTGTCGCGCGACGACGCCTGTCCTGTCGCCTCGTCGTCTCCTCC
TCCTCCCCTGCCTGCTACGCCACGCCACGCCAAAGACACTCGGAATCGGGAATTAAACCC
CTCCCCCCACCACCACTACCGGTAATAGTCCGTCTCCCTTCCTCCGCCCCGCCCCCCAGC
TGCCCGCCAGCCCGTCGCCCGCCGCGCCTCCCCAACTCCTCGCCTCGCCGCCGGAGCGAC
GGAGGCCGAGCCCGATCGCGGATCGGGTGCCCCCAAAGTTCGGCCGCCCTCCCGGGTTGA
CCCCTCGCAGGTGACGACTCTCCCCTCCCTGCCATCCCCTTCCTTCCTTCCGCGCGGCGA
GTTTGTGGAGAGGGAGACCTGGCGCTGTGTGTGTGCGGGCATATGCTTCGGGAGGTTTTT
CCGGTGCGGCGGAGTCGTGCTGGTGAGCTGCGTGCCTGTGTACCGTTGTGGGAATTGAGA
TGGTCCGTCGGGTCGCGGTCGCGTTCCCGGGGTTCTGGGGATTCCAGGGGCAGGAGGAGG
CAGCGGATGGCGCTCGATTTTGGCCTGAATTTGGTGCGTGGGCGCGCCAAGGGGATTGAT
TAGCCGTGCGGTGCGCATTTCGGGGGCCGGCGGCGGGGTCAGCGTCGGTGGGATTGGGGA
CTTGCGCGCGCGACTCAGCCCTCCGCCTTCAGGTGCCGCTGCTTGTGATGGGGGCCGTCG
TCATTTGCATCTCCTTGCTTCTGTGCCCAACTTTGGTCTGGTTGAGGGACGTTTCTTCGC
CTGCATTTTCCGCTTTCAGTTCAGACCTCCAGTCTTGGATTGCTGTAATTGGGGTTTCTG
CACCACTGCTTCATCATCGGCTTATGTTAGAAACTGGAAATGGCAACACATACAATGTGC
GCTTATAGTTTTCCCATCAGCATAAGGTTGCGCATAAACTGAAACAAACAGAAATAGCAC
GAAATTACCTTGCCTGCGGCTGCTGCGGTCGCTGGCTTGCTCTGCTTTGTTCTAGCATGC
CCAACTTGGTGCTATCTGGTTACCCTGTTTCTCTTCGCCTCCATTTTCTGCTTTCAGTTC
AGACTTCCATGGCTGGATACTAACTGAGGTTTCTGCGGCAAGCACTGCTTCACCATCAGC
TTATGGTAGAAACTGAAACTGACAACCCATGCAATGTGCACTCATAGTTTGGCTATCCGC
AGAAGATTGCACATAGAGTCTATAGTGAAACAAAAAGGAGCTTGACCCAAGTTATTAGCT
GATATATAAAAGCTTGCAGCTGAGCATGTGTTCGTTCGAAAATCATGGAAAGAACCAAAA
GTCACAGCACGACGCTGACTGTTTACTTACGGGACTCAAAACTTGATGCCAACCTCTTCT
CCATTTCCCAGTCAGTGCATATGTAATCTTTGAACTATCATGCATTGCCTACAATTTATG
TAGGAGTTATAGTTTTTGACTTTTTGTTGCTGTAAGCCTTTGTATTGATGCCAGAATGTT
CTTGTATTTCCCCCTTTTCTTAGTACCCAGAGGCAGATAGATAGGAAGAAGTAAAATAAA
AGGAGGTCATTATGCGCCGATGGTTTTGTTGCAGTCAGTTTCATGCTTCATATCGTGAAC
ATGAACATGAATTTCCTTCCAGCCCAGATGAGAAAGAAGGTACCCCTCCTCCTTTCTGCT
CTCTCGTGTTTAATCAGAGGCCTATATTGAAGTGTATTGATTTGAGGCTTATGTTCTATA
CACATAAGACATAACACCACCTGGAAATGGGTTTGAAACTCTTGTGCAGACTTGAGTTTC
AGTTGCTGGATTTAATAGTCGTTTGGGGTTCACCAAAATCATCTCATTCACTTTCAGTAA
TTTTATTTAATATCCATGATATCACGATGTGCTGTGGAACATCATGCGCTAGTGTTTCCT
CAACAATAGATTCTTCTAGTAATTTACAAGTTAAAACACATGTTGAAAAAATTCTAGTAT
CTCCACCTAGCATGTATTCACAATCTTTTGCTAATTGACACAGAAGTTAAGCATTAGCTC
CAAAATGGACCTGTTTTTTTTTCTTTTTCCGAAGAGCCTAAAAAATGAGGACCGTCCAGG
ACTAGTCCTTAGCGGTTTATTTTTATAGAAGAAGCACCTGAGTACACAGCGCATAGTCTG
GGACTTGAACACTGGTGAGCAGCACGCGTACCCGCATAGCTAGCCACCCGAGGGACGCTC
GGTTTAACGTTACAAGTTAGTGCATTTTCAGCATAGTCGTTGGTCAACACCTTTTCAGAT
TATGTCAACACCTTTCCAGATTA