Contig Data
morexGenes
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Map Locations of contig_45659 (5972 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_45659

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61592 1 263 bp None Available Available None
MLOC_61591 2 3414 bp AK365248 Available Available None
MLOC_61593 1 1110 bp AK373886 Available Available None





CDS Structure of MLOC_61592






CDS Structure of MLOC_61591






CDS Structure of MLOC_61593






Contig Sequence (5972 bp)

>contig_45659 5972 assembly3_WGSMorex_rbca.fasta
CTCGTCACCGCCGTGGCCTCCGCCGTGCTGGCCGCCGCGCTCGTCTACCTCCTCGCGCGC
CGCCGCCGCGGCCGGCCCGAGCCGCAGCCTGAAGCGTATGAAAAGCCGGCCTTGCCTAAG
CCTTCGCCGGCCAAGCCCGCGCTCCACGATGATGACCAGCACCCCCGGGGCTCCACCGCC
ACCATCTCCAGCACCAGCTCGCCGGAGCTCCGGCCCATGCCGCCCCTGCCACGGCAGTTC
CAGCAGCAGGCAAGGATGAGCCCGCTGTCAAGCCCCGTCAATGAAGACATAATAGGGGAC
AACCGGGCGCCGGTGGGTGTCCCACCGCCATCACCGCCGCCACCACCTCCACCACCAATG
CCACCGAGCAAAGGCAACGGGAGCGCGCAAGCGGCACCTGCACCTCCAATGCCGCCCCCT
CTGCTGCCGCGAGCCGGCAACGGCAGCGGCTGGCTGCCGAGGCGGCTCTCGGAGCGCCCC
GCGCCCACGGTGATCAGAGCCTCGGCTGGCGCAGTCCACCCCGAGGAGTCGCCGCAGTCG
GAGGAGAAGGACGTGGACGCCGGCGCGGCTGCTCTACCAAAGCTGAAGCCGCTGCACTGG
GACAAGTTCCGCGCGAGCTCCGGCAGGCCGACGGTGTGGGACCAGCTCAAGGCGAGCTCA
TTCCGGTGAGCCCTCCCCACCGCTCTGGAGTACTTCATTTACCATACTCTGCATCATAGC
TGCTGCCATGTGTTGGATCCATTTCGTTCTGAAGCTCACCGCTGCCTATTTGTTCCACTG
CGTGTACTCTAACAGAGTGAACGAGGAGATGATCGAGACATTGTTCGTCTCCAACTCGAC
GAGGAGGATGCCCAAGAACGGATTCAAGGAGGCAAACGGCGCACCCTTCAACCAGGAGAA
CAAGGTGCTCGACGCCAAGAAATCGCAGAACATCGCGATCATGCTACGGGCGCTGGACGC
CACCAAGGAAGAAGTGTGCAAGGCCCTGCTTGATGGTGAGAAGAGATAACACAATACCCA
CACACATTTCATTTTATAAACTTCCATTCTGTAAATGCTTTGTCTGATCACCCAGCTCCA
TGAACATTTCGCTTGTGTTGCCATTTCTTGCAAATGCAGGCCAGGCAGAGAGCCTTGGAA
CCGAGCTGCTGGAGATGCTGCTGAAGATGGCCCCTACCAGAGAAGAAGAGCTCAAGCTGA
GAGAGTACAGGGAGGATGCTCAGTCGAAGCTCGGCCCCGCCGAGAGCTTCCTCAAAGCAG
TGCTCGGGATACCGTTCGCGTTCAAGAGAGCGGAGGCGATGCTCTACATCGCCAACTTCG
ATTCGGAGGTCGATTACCTCAAGACCGCCTTCAAAACCCTCGAGGTACTAATCATGTCCT
AACTTGTACTATAAACAGTTTTAGATGACAAAAAGGGGTCAGGCGTGCCATGACAGTGTC
TCCTGAATCGAGTTAAAGGACTCTTGTTTCTGTAAAGTTGTGCTCGGCGATCTAAAGCGC
CGTATGTGCCATGTTCCTATGATAATTCGCCGCATTGCGGTCTTTACCGTTTAGTGTCAT
CATGTAGACATGCTTGGGCACGATCATGTAATCTTGTTTAAAACTTCAAATTATTGATTC
AGGGGTTCCTTGCAGCATAGAGGTAAACAGTCACTTATAAACTTTGTGATCCATTACCAT
TTCAGGCAGCGTGTGAGGAGCTAAGGGGCAGCAGGCTGTTCCACAAGATCTTGGATGCCG
TCCTGAAGACCGGTAACCGGATGAACACCGGCACGAACCGTGGGAACGCGCACGCCTTCA
AGCTCGACTCGCTCCTCAAGTTGGTCGATGTGAAGGGCACGGATGGCAAGACGACGCTCC
TGCACTTCGTCATCGAGGAGATCACCAAGTCTGAGGGTGCAAACATTGTATCCACGAGCC
AAACGAAAGACAAGGTGAGCGCCGTTGCAGATGATTTCCAGTGCAAGAAAGTTGGCCTGA
AGATCGTGGCTAGCCTCGGCGGTGAGCTGGGCAACGTCAAGAAGGCGGCGGGAATGGACT
CCGACTCGCTGGCCAGCTGCGTGTCGAAGCTCTCAGCCGGCGTGAGCAAGATCAGCGACG
TCCTGCAGCTGAACCAGCAGCTGGGCTCGGACGACCGCTGCAAGAGGTTCCGTGCCTCCA
TCGGCGAGTTCCTGCAGAAGGCCGAAGCCGAGATCACGGCGGTGCAGGCCCAGGAGGGGC
TCGCCCTCTCCCTCGTCAGGGAAACGACCGAGTTCTTCCACGGCAACTCTGCCAAGGAGG
AAGGCCATCCGCTGAGGATCTTCATGGTGGTGCGCGACTTCCTCGCCGTCCTCGACCGAG
TCTGCAAGGACGTCAGCAGGATGAACGAACGGACGGCGACAACAGGGGGCTTCAGCACCT
CGCGCCGGGTGGAGAGCGCGGCCCTTCCTCCACGATTCAACGCTGCGGCGCAGTCCAGCA
GCAGCTCCGAGGAGGAGAGCTCGTCGTCATCGTCGCAGTAGCCGTCAGTAGGGCAAGACA
CCTGAATGTCTCAGCTTGGAATCTGCATCCTAGCTACTGTCTAGATGAGCAGGCAATGCG
GAGGACCCAACCTGTAATCATCGCTAGTATTTTGTAACTTCAGCAGATACCCCGATGTCT
AGAAGAGCAGCAATGCTTGGAGTAAGTGTAGATCATCAAAGTCTATATCGTAGCAGTACT
TGATTCAGCATGCTAAAGCGTCATCCGGCAGCCAATGGCCTACCAGCAAAGGTGAAAGTG
TCGTTTGTACATGATGATTCAGCCATGCCAAGAATCAGTCACTCACTAGCAGTAGTACTA
GACCAAATCTTTTGGCAAATTGACCGTTCTGATCTCATGATAAAAGTTCAGTGTAAAAGA
AAAGAACCAATCACATGATCAAAGCAGAAGTAGCCAGTAGCCGCATTTACATTTACTTGC
TGCAGTGCAGCCACCACCTTTCAGGATCTGCTGGGATTCGTCTTTTGCTTCCCATGCTGA
CAAGGGAATTATCCCTGCATTTCTTTCTTTCCCTCTGACCTGATGGCCTCTATCCTTGTT
TACATGCTGAAACTGGCTTTCATTTTCAGCAAATAAACAAGGTGAGTTGATGCAATGCAG
CCATGCCATGATGCATAATCAAATAAGAAATTGTGCGCTGGGCCTGCCATTATGTACGTA
TATATATAATCAATGGATTTAGCCCTCACAAAAAGCAAATTTTCGGGTCTCGAGGTTGTG
GGGTTATTGTATCCTACTGTATGTGCTCCAAATAATTTCCCAAAAGAAACGCCAAAAGCT
ACACTTCTGCCGGTCTGGTTGCCAGCATACGCGGCTGATGTTCAAATCATGGGGTACATC
TCCCACTAGTTAATGTGGCTAGTAAAAAGTTCCTAAAACTGTGGCTGGAACCAGTGACTC
TGCCGAAGGATCAGTCGAACAAACCCTCCGCATCCATGCGGTTTAATATACGGCGTGCCT
CTTCTTCGGTTGAGGGAACAACATTGCGGATGTTCAGTCCGTTCTTCAGCGCGTCGCTGC
CGACTGAGAAGGTGAAGTGGAATGTGTTGGAGATCTGTTTGTTGGGCAAAGCCATCAGCA
ATGTAGTACTGTGAATGGAAGTATTCAACGAGGTACAAAGACTAGAGGTTTAGCTGCTGC
AGTCACAACAGTTTGTTCTGGGCAGCAGTGTGAGATTACCTCGCTTTTTCGGAGCTCAGG
CCTTGTCACATGAGCGACAACTTCGACATTTACCAGGGGCTGCCATTTATTCTCAAGCTG
GGTAAACAAGACACATGATTTGAATCGAAGAAAGTCTCCAACATCCACCTGTGCTATCAC
AATTGGACATCGTTATTCCCCACATCCATGATCCAGTCTTACATAACACCTTTAGTGCTA
ATTTGAGGTAATTACCAAGAAGCAACCATGGAACGGTTTTCCTATTTAAATTCGGCACTA
GTTCTAATATAGTTGTAGAAAGAGTACCTCTACTTCTTAAATTAGAAATGACGACTTGAT
TGTCTGAAGATACGAGCTTAATTACTCAGAAACGCACCCTCTAATATACTCCCTCCATTT
TTATATATAAGGCCACCATCAAAATTACAATTTGCACAAATACAAGGTCACTAACACTAA
CCGATGCAATATTAATGGTGTTTGCTTCGTAGTACTAACAAAGGAGGACATTAATTATCC
CTTACATGCATGTGGGAGTGAGATCATTGGCAATGGAGGGAGTAGTTACTTACCGGCTTT
AAGAAGTCGACATGGTCCACCTCAAGAAAACACGGTCTCTGCCCAACAAAGGCATAGGCA
GTCGAGAAAGCAAGCTCAAATGCTCGGTGCATCAAGAAACCTCCAAATATCCGTCCATAC
AAGTTCCGCTGTTGAGGTTGGCAGATAAGGGAGTTCTCCAGGCGAGTATCCTTCATCAAT
ATGCTATCCCTATCAGCCAAAGCAGGAAAATCAGAGAAAACACGACCCTCTGCCAGTAAA
GCCTTCAGCCTCTCAGCCTCAGCACCAAGCTTATGTACCCCCTTTTCAAGCACTCCCTTC
TGTTCTTCTCTTTTCCTTTTTTTCACCTTATCCAGTGCTTCTGTCTCTTCATATAACTGC
TTCTCTCTCTCGGTTTCTGGTGAAAGGCGGTTCACTGGAGCGGATTTTCCGGTCACTGAA
TCTCGTGCAACAAATGTGAAGTTAGCCGTCAATGCAATTGGGTCTGACTGTGTATCACCA
TCTGTTGCAAGTTGTAAAATGTCAGACAAGACAGTAAAAATATCTATCATACATGACAGT
CGTTCAAAATCGAATAAATAAGAAGATCGATAATTTCTTTAGCAACACTACCTTGATCAA
TCTGAGTCACTTCAATCTGTATATCAATCGAAGAGCGGCCAACGTAAGTAACTGCCCCAA
CAATCTTTACTTCAGTGTCCAGACGAAGTGGCTTCATTAAGACCATCTTATCCACAGAAG
CAGTAACTAACAAAAGGGGTCTTGTTGTGCTATCGTCATCTGAACAGTGCTGCGTGTCAC
ATAAGATTTGTCAAGAAATATTCCTGCTGGATGTTAAAAACACCATAAATTAACAGATAT
CGGTTATCTGTTGTACATAAGTATCATTGTTATAGTACATATGTTGAACTGACAGCCTCA
TCATAGTTATCTGTCATCCATAAATAATCAAGTTATCAGTGTATAGTATATGTTTCCCTG
CTGAGGCAGCCCCTTTGCTGTTCCTCCGCAAGCTTTACTTTCCCAAATAAGTTGTATCAG
ACATATTTGTTTTCGTTGTTATTCAATGGAGCTGGGGCTGGAGCTTTTTCCCTCTAAAAA
TTGTATAGTAGTATATGTTGAACTGACAGCCTGGAAGGAATGCTACTTATGCCGTTGTTC
AAAAGGAAAGGAAAGCAATCTTTCAAGAAAAGAAGGAAAGGAAAGCTACTAAAGGCCTTA
CTTATTTAACAGTTTGTACCATTGAGCTACCTAAAGGGTGTGTAGCCTCTGCTGCTTCCA
TTACCAAACTGACGCAATCCTGATTCAGCATGGTTAATTACTCGTTCCAGTTTCAAACGT
GTGATACAGTGATATTCTCTGGATGTACCGAGTAGTGAATACATCCGGATGAATCATGCA
TCTTAGTTGTTAGAATCTGAACCGTTGGCAACTTTTGTGAGAGGAATCAGATTCAGGAAA
TCTGAACATTTCCATGAGCACCTAGAAACAACAGATACCCCGAATCCTGGCTTCTGCTTA
ATATTTACTTACGTATAATATACAGCCAGTGCCAGTTCAGTTGTCAAGTCAGTTAATTGT
GAGTTGTGACAACGAGTCAACAAGCTATATCATTACAGAGCAGAACTTTGCCATTTCTAC
GGGCACCTAAAATATCTGACCAACACGACTGCAAAATACTACAGATGATCTCAGAGGCAA
GGCGGTGGAGTGTGTGTGTGTGGGGGGGGGGG