Contig Data
morexGenes
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Map Locations of contig_45638 (6784 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45638

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61569 3 912 bp MLOC_61569.3 Available Available None
MLOC_61570 1 1678 bp MLOC_61570.1 Available Available LOC_Os08g10470.2, FRAME:-1, EVALUE:3e-119, 13108.m01115 protein histone-lysine N-methyltransferase ASHR2, putative, expressed
MLOC_61568 1 371 bp MLOC_61568.1 Available Available None





CDS Structure of MLOC_61569






CDS Structure of MLOC_61570






CDS Structure of MLOC_61568






Contig Sequence (6784 bp)

>contig_45638 6784 assembly3_WGSMorex_rbca.fasta
AAAACAGTATGGCTATGCTAAGTATTTTTTATATATTAAATTTTACATTTAAATAAGATA
CAAACATAGTCCAAGAGAAAACAAATATCAAAGGGATTCCAATTTAGGCACCAGCAACAA
TACTTAAAAAATACAATTTATTTTTATGGTTATATATAACACAACAATTCACTTTTAACG
GAGGCATGTACTTGAACAATCTAGACACATGTCCAACAACTTGAGCGAAATCTAGCCGCG
CAAATGCGCAGGTGACATCGCTAGTTCACGTTGATAGCGCTTATTGTTTGTGGTGCTTTC
TCTTCTCAAAGTAATGTGGATCCGACACATTCTGAGTCAAAGGTTTTAGAAACTGGAAAG
GGAAATGATTAGGATCAGTCGACGGATTGCTTCCGTGGCCGTTAGATCAAATTTTAATCA
GATTGGTTAGAAGCAACACATTATCTATACTAGTTTTTACAACTAAGTGGTTGTTACAAT
CTCTCTCTCCGCAACAACAGGTGTGTTGCGGAATCTGGATCTGGATTCCACGAGAGGAGC
CACCATTCGTGGTCCTTCCAAGCTCCTTGTCTCGAGCTGCTTCGACCGACGTCGTTGACA
CTCGTTATCGACCGCATGTCGACGAGGTCACCGGCGTTGGTGCCGCTGTTGCCTCCCAGC
TTCACGGTTGTCCCAATGCGTCCAAACTCAAGGTGCATCCTGTCGTGTGGAGGATCGGGT
CACCAGTGTCCGTGCCCATCGTGTGGAGCTGCAGCCACCGTTGCCTCGCCGTTCCGAGAG
AGCATCGACCTTTCTTTCATCAACATGGTTGTTGCTCGATATCTGCTACATTGAGTTTTT
GCAACACGGTTTGTGTTGCGGAAAATAATTGTACAATTCTTTACTTTCAAAAAATGTAAA
TTATAGTAATATCTTTGTTGCAAAAAAATACAACAAAACTTCCGCTGCAAAAAAGCTGCA
ACAAAATAATTGTTGCAAAAATAATCTGTAAATTGACCTATTTTATAAAAAAATCCACAA
TATAATCCATGTTACAGAAAATTTCTACAACATGACATGTGTTGCAGTAATAGAAGATGA
TCCGGCTGTATAATCCATCTGATCGAAAGGCTAGCGAGGCGGACGCGTAGCAGCGCCCAA
ACTGGAAAAAGGTTAATGATGGAAAAGCGTTTGCTTTTCTAACACGGGCCGTGCAGGAAG
GGCACGAGATACTTGCCGTCGTGGCATGCTCGAACCGATGTTTCGTCCGCGCGTGGCATT
TCCTCCAGTAGCACTCTGAATCTCTGTTGACCAGCTACGAATCCGCGAACTGACCAACGC
CAACCCAGTCAGCAGTCAGCACGCCGGCCCTCGTAAACGACGAAGGTTCGCCGCGGATAA
GCACTGCCAGGAATGAAGGACGGAACCGTCACCTTTAGTCACCCACCCACCGACGGACGA
CAGCGACTTTGCAGCCATTGCCGCGTGGATTTCTTCCTCTAATCTAAGTAAACCAGTCCC
CGTCTCAAGACGGCGGCGATCGACGCGGCTAAGCAAACCTACCGGACGCCGCCTACGCGC
GTGCATCTCCCTATAAGTAGAAGCTCGATGGCGCCGTCTCCACTCCATCCCGTTCTCTCC
AGTCCCTGGCTAGATCCTCCTCCTCCTCGTCCTCTCCTGTTCTCGATTGGCATCCGTTAA
TCGCGTGAGAACTCACAGTCACAGGAACAGAGCATCGTTCGCAGGGTGTTTGCTAGCTCT
TCCCGCGACTCGACCATGAGCTACCAGCAGGGTACGTAGTACCAACTCAATTTTCTTCTG
GGGCCGTCAGATTCCGCTACGGTTCGTAGCAATCGCCGGCGAGCATGTTTGGTTCTTGAA
CCCTGAGTTTATATCGTTCTGTTTTCTTCCGGTTGCGCAGGCTCCCCGCCGCCGGGCACT
ACAGCGGCGTACCCTCCGCCGGGCCAGCAGCAGCAGGCCTACGTCGCGCCGCCGCCGTCC
ACCTACCCGCAGGACCAGCAGTACGCTCCCGCCGGCGCCGGCGCCGACACCACCAGCCGC
GGCGGGCACGGCCACGGCGGCGATGGCTTCTTGAAAGGATGGTAATTCCTCTCCCTTGTT
CCGAATTCTCACTCGGCCCAGACAATTGAGACATACGTCTTCGTCGTCTCCGTGGCCCTG
TTGTGGTGAACTACTACTAATAATGTTTATCTGCTTGCATTGTTGCAGCTGCGCGGCGCT
CTGCTGTTGCTGCCTCCTCGACGCCTGTTTCTGATCGAGTTCGTCCCATGTTGTTCCACC
GGCATGATCGGCATGATCGAGTTCAAGTACTAGTCCCAGAGCATGTGCGTTGTTTTGCTT
CCATTCGTATGATTCAGATAGTTAGACCTGTGAGATTTTTCTAGTGGCCTTGTTGAATGC
ATATACTCTTGGTGTTGTACCTTGTTGGAATGATGAATGAATTAGTATAGTGCATAATTT
CACAATAATTGTAGTGAACTTGGTACAGTGAACCTGAAGTTGCAATGTTGTTGATCCATT
TGAATCGTACACTGATTTCACAAATCTACGAAAATGGGTGCCGGGTTTCAGTGTCGCGGA
CAACCGAAACCTGAACCGTAAAAGTACTACGCAGAACTCCCTCCGTTCCTAAATATAAGT
CTTTTAATAGATTTCACTAAGAGTCTATATAGGGAGCAAAATGAATAAATCTACACTCTA
AAATATGTCTATATACATCCGTATGTAGTCTACTGGTTGAATCTCTAGAAAGACTTGTAC
TAGTTGAATCTCTAGAAAGACTTGTATTTAGGAACGGAGGGAGTATAAAATAGGCACGAG
CTCTGGTTTCAAACCCTAGCAGCCAGGCAAATAAAGCATACACCTTGACAGCATTTGTTG
TTTCGTAGTAAGGGCAAAGCAATCTTCTCCATCACACAGGCTGCCATATCAAATTTCCTG
AATATGTACAGGAGGTAGCTAAACCCATTCATTTGCTCACAACACAAAAAATGCACCATG
CTCGAGAAGTTTGATCTCCGCCACAATCAAATAAAAGACAACAATCGCAAAGATCGGTTT
TATAACTAAAACGAAGAGCAAGTGATGCAGGTCAGCAGGCAAGATAAACAAAAAGGGGGC
ATAATTCATACACCGACCAGTAGACTTTGCACAATCAGTTTCTCACACCGCAGCAGGTTC
ACATCGCCAAAGATACAGGCATACTGAAAATTGTACAGGTCCAAGCAAGGCTGCCTACAA
ATCTCATTCAGTGAACGAAATCATGTACTTAGTACAACATACATCTTCCTGACTTCAGGC
GCATTAGACCAGTTCTTTAAGGCAAACAACCCCAAAGCACGGAGCGCATTAGACAATTCC
TTTAAGGCAAACAACCCCAAAGTACGGAGAAGGCCGAGCAGTGCATCCATTTCATCACCA
TCCACCAAGTAATCTGCGATATGACAATTCACATGTTAGATCATCAAAGACAAAGAAACA
CTTGTGCACACCCAAACCATCTGATACCAATGTAGTGCCCACTAGAGTTATCACAATATA
ACTACAATAGGAACCCTTGTTTGTTCCCAACTTCCCATGTGATTTTCTGCTAATTAACCA
CTAAATTATGTATGACTATGTTTCAAAAGCGTAGAAACCAAGAGAAAACCAACATATAGT
GCCTACCCATTGCCTACATGTTTTCAAACATGATGCTCGGGATAATTGGAAACGTGTATA
CAGTAATATAATGAGGCACCATTTTGACTGGTCAGCTTTCCGTGTTTCTCAAGTCAAGAA
GCCAAGTCGAACATAATAAAATTCAGTAAGATTTCTGTGTTCCTTTTACATAGTAAAACT
TCCAAATGGTAAGCTTTGCTAGTTAAGTAGTGCGTGACCTGACATTTCACCTGTTCTTTT
GACTTTAACCAAAGAATTCAGAGAAACCATAACAAAAATCTCTCACACCAAACTATGGAA
AAACAAACTATAGGAAATTAAGACCGATTAAGGTTGTTTTCACTTGCATACTACACTGGT
CTAATCAAATCATACACTTTCTGCTCTACAACTAACCCAAATGCGCAGATTGAAAATTTT
ATCTTGAACTAACTAAGATACTAAGTACTTCGGTATCAATTCAGAACATCCATGAAGCAG
TATCACCAATGCAGCAGATAGAAGTGTAAGTGGCAAATACTTACCCCCCAAAACAGCACC
AAACATCCTACTGGTCCATGCTGCAATCACCAGCATCAGGCTCATCCTCGTCTTCTTCCT
TCTTCAGTTGCCCACAGGCATTGCACTCAAATACATGGGACAGCTCACCGTTTGGTAAGG
GTGGCAGCGGCGCAAGCATGCCGTAGCAGTCATCCCGATCACACAGATACCTCACAAAGA
AGAAGGCATGCGGGAAATCATCGTCGTCGTCATCACTCCCTTCTTCCTGCTCCATCCCCT
CATCACCACCGTCTTCAGCATCCTCCTTCCCATGCTCCTCATCTTCCATGGTGTCATCCC
CATCAGCGCCATCATTATCGTCATCCAACTTCCACTTGCTCTCAATCTGGCACCGATCAC
ACTCACACCGGAACCCATAATCCTCCAGCAGCCTGCGTTGCCGGTCAGCGTACCTCCAAT
TGGCCGCGAAGTAGCTGATGCAAACCTCATTCCCCTCTGTTATGCCATGGAGAGCGCGCA
CGACCATGTCCGTGTTCCCTGGCCCCGGCCTGTCGGCATAATCGAAGTGGCAAGCATTGG
GCAGGCAGTCGTGGTTGAGCAGTGAGGCGCGCGGGTACACCGCGCAGCACCGCGCCTTGC
GGAGCTCCAGCGGCACGTCGGGGCGGTACGGCTCCAGGATGGAGAAGCTGTTGGTCCGGT
CCTTGGAGAGGAGGGCCGCCGTGAGGTCCAGAGAGAAGCCAGCGGGCAGCATGTGCGGCG
GCGCCACCGACGCCACCGCGGCGTGGAGGCTCGCGGCTTCCTGCTGCTGGCTCGGGGAGG
GACCCTGCGGAGCCGAGGAGAGAGAGAGTATGGCGCTGAGAGAGGGCTCCTGGAGCGAGT
AGGCCGAGAGGAGGAAGAGGAGGGGCTCCTGGTGCGCCTCGGGGGCGGCGGCGAGGCCGC
TGGAGAGCGCGGCGCAGAGGAGGCGCGGGTGGGAGGCGGCGGCGCAGGCAGGGGAGCAGA
AGGCGGCGGCGCGGCAGGATGGGCAGGGGGTGTGGGGCGGCGGCGGGAGCGAGCGGAAGC
AGGCGGAGCAGTAGGAGGAGAGGGAGGCGAGCGAGGACGGGTAGAGGAGGATGGGCGATT
CCGACAGGAGCACCTCGCCCTCGAGGATGTCGCGGGCGGCGAGGAGCGCGCGGCCGCGGC
CCGGGAGCTCGGCTACTCTGAGCGTGTCGCCGGACATGCTTGGCGGTGCTATTCCGGCGG
CGGCTGAGGAATAGGAAGAGCAACAAACCGCTGGCAGAACGGGCGGTGCTCTTTTCGGCT
GCTCCGTGGGCCGGAGTGGAGTATTTGGCAGTCCATTTCGCGGTATTAGGGTTTCTGATC
CCGCATTTCCTATACGACGCTCACTACGTCAAGTAGTCGCCAAACGCACACACCAAGAGA
GCTTGCGACGGAGTGCGCCAGCCCATTTAGGCTTCCAAGGCTTGACAAAAAGCTTATCTC
TTTCCAATTTCACATTGGTAAACGTTTGTGGCCCGTGCGCCGGCCGGACACACGTGACCC
ACGCATGCAGCTGATTAGGCATATAACTTTTTTTTCGTCTAAATTTATTATAACCAGCGT
TCATATTTGCTACAAACGTTTTTTATTTGTAACATTTGTCCAGTAAAAAAGTTTGTCCAG
TAAAAAAGCTGCATATACGTTTGGTTGCAACTCTAGTTTCTCGGATCTTTTGTTATAATC
GGTGTTTTTTACTTTTGCTACAACCGACATCATTTTTTGCTGCAACCGTTCATTAAAAAA
GTTTCATACACGTTCGTCAGAGTTGCAACCCGAGTTCACCGGATTATTTTCCTACAATCC
TTTTTTTGTTTTGCTATCACGCATCATCAGCTTCGTTTTTTTGTTACGACCACGTTGATA
TATTTTTTGCTACAACTATATTTTTGTTGCAACCATGAACGAAAATTGTTGCATCGAAAG
AATAATCCTGCATGAAGATCTAACGGTGCGGTTAGCGTACATCTGACGGATCGGACGGCC
GGCGCTTGGCCGGCCGAACGATTCGACCGGCGGGCCGACGCAGAGCACTGCCCCAAAATC
GAAACGCGGCTAGACCAGGCAGAGCAAGAGTGCAGCTTCAACTGGTCCCCTTAGACATCA
TTTAGGCCGATATTAGATCGTATCGGCTATCTCATCTGGGCTCGCACATGATAGAAAAAA
AGTCTCACCAAAAAATCTTATATATACTTCCTCCGTTTTAAAATAAGTGATTCAAAAATG
ACTTAACTTTGCACTAACTTTAGTACAAAGTTGAGTTGCTTATTTTAGTATGGAGGGAGT
ACTTTATGAGCATCACAAAATAAACAAATCGTGAATTCGTGTAATTGGCCAAGCTGCTAA
ACTAGCTCAAGTAGTGATACATCCTTCAATAAAATGAATCCTATTGAAAGTCCATTTAAG
GCAGCTCCAATTCTCACACGCTTGCTAGAGCGTTGGAGATTATTATTTTTTTGAAAAATT
AGCTTAGCATACAAGCGCTCATGTGCACAATGCAAAGGCCAATAAACACCTTAACAAATG
TTTGGTCGAGCTTTGTCTCTCTCTGTTCCATCATTACGCCCCCCCCCCCTCCCTTCTCTC
TGCA