Contig Data
morexGenes
Links



Map Locations of contig_45606 (5701 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45606

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61533 1 1772 bp MLOC_61533.1 Available Available LOC_Os01g70190.1, FRAME:-2, EVALUE:0.0, 13101.m07619 protein exostosin family domain containing protein, expressed





CDS Structure of MLOC_61533






Contig Sequence (5701 bp)

>contig_45606 5701 assembly3_WGSMorex_rbca.fasta
AATATAACTGAAGGCAACCATTAGCCCATAGGAATTNNNNNNNATTACCAAAACCACATA
TGGGGATATATGCTCTAACAGTAGTTGCATGCCCAATTTTCCAAAGATCCAAGCATGATA
ATTGCAAGTATTTGGTACCGTTAGAACCTTTGCCGATAGCTCACATGGCTTGGCAACACA
TCTCACGGATTTTGTGGGATGTCTTCTGAAATCTCAGGGCAAGGACGTGATACTTGTAGT
GGTTGATAGCTTCATTAAATTTGCACACTTCATCCCTCTATCGCATCCTTTCAATGCAGA
CAAAAGCTCAATCATTTATTGACCATGTCCTAAAGGTACCCCCCCCCCAACACTCATTAT
ATCTAATAGGGACATACTATTTACAAGCTCGATGTGGAAGCAAATTTTCAAAGCACTACA
AGTGGAATTGAGATATAGCTTTGCTCACCGTCCTCAAATAGATTGTCAAAAAGAAAGAAT
GAGCCAATATTTGCAATCTTATCTAAGATGTATGGCTTTCAATATCCCAAGAACTGGATG
AAGTGGTTATCTCTAGCGGAATTCTAGTATAATACTACTTTCCACACTGCTCTGAACATC
ACTCTCTTTCAAGCTTTTGTTTGGTTTCCCTCCACCTGCGATTGGAGAATTGGCAGTGCC
AGGGCCCGAGGACTTAGAAGTTGCAGATTTCAGCCAGACAAAACATGAAATGCTAAAGCA
ACTCAAGACTAACTTAGCTCAAGCACATGCCGGAATAAGGAGATATGTTAATTTTAAAAA
GGTCCGAGACAATTGAAAGCGGGAAATATTGTTTATCTCAAGATGCAACCTTACTGGTTG
GATGCATTTGGTCTAAGAAGCACGATTAAATTACATGGCAAATATTATGGGTTTTTCCAA
GTGCTACAAAAGGAGGGCACTAGAGATTACAACGTGTTACTGCTAGCATGAGTACAAATT
GACCTTCTCTTCCATGTGAGCTAGTTGAAGTTTCACATTGGCTACTTTTTGAACCAGTTT
ACGTGATGTGCAAAAGGAGGGTTATGGGATTCAATATCGATATGATAAAAGTTGAGTAAA
TAGCAAAAACTGTCACAATTCACATTAGGGTTCCAAAAAAAAGTGATCTAAATGCATTTA
TATTAGTTTACACAGGGAGTGTCATGTAAAAAAACACCTTCTCTTCCATGTGAGCTAGTT
GAAGCTTCACATTGGCTACTTTTTGAACCAGTTTACGTGATGTGCAAAAAGAGGGTTATA
GGATTTAATATCGACATGGTGAAAGTTGAGTAAATAGCAAAAACTATCACAATTCACATT
AGGGTTTCAAAAAAGAGTGATCTAAATGCATTTATATTATTTTACAAAGGGAGCGCCATG
TAAAAAAATCACCTTCTGTTCCATGTGAGCTAGTTGAAGATTCACACTGGCTACTTTTTG
AACCAGTTTACGTGATGTGGAAAAAGAGGGTTATAGGATTCAATATCGACATGGTGAAAG
TTGAGTAAATAGCAAAAATTGTCACAATTCACGTTACGGTTTTAAAAAAGAGTGATCTAA
ATACATTTATATTAGTTTACAGAGGGAGTGCCATGTAAAAAAGATCACCTCTTGTTCCAT
GTGAGCTAGTTGAAGCTTCACATTGGCTACTTTTTGAACCAGTTTACGTGATGTGCAAAA
AGAGGGTTATAGGATTCAATATCGACATGGTGAAAGTTGAGTAAATAGCAAAAATTGTCA
CAATTCACGTTAGGATTTCAAAAAAGAGTGATTTAAATGCATTTATATTAGTTTACAGAG
GGAGTGCCATGTAAAAAAATCACTGATACCTACGGATATTTAAAAGAAAAAACCACATAG
GACCGATTAATCAAAAGAAGATGTACATATGCGGTGAGCGTGGATCGAACACGCGACCTT
CAGATCTTCAGTCTGACGCTCTCCCAACTGAGCTATCCCCGCTTTTGATTTTGGAATTGG
TTAGAGATCTAATGATCGATCATTACAGATCAGCAGTCCAGCAATTGCAGTGTCTTGCTC
CGTTCTGGCTCGTGCACCTTTGATGATCTTGTCAGTGTTAGTAGGGATATAAATATTGCA
GCACGTATTTCTTTGCTGCCAAGCATGCATCGATGGAACGTCCGGCCTGCTGCAGCAGGA
GCTGTCGGGTGCCGGCGTTCCTCGCAAGTTGTATTCAGCATGACCTTAATCTACCTTCAT
CACCAATATAAGCTATATTGATGCAGAAATTCAATTCGGCTCCCGGGAGCATGACACAAA
AACAATTTTTGAAATGTTAAAAAAAATCAAGACAAAATTTTCATGTGTTGTTATACAAAA
AGGCTAGGCATTTTGGCCTGTGCAAAAAATAAAAATAAACACCAAATGTTACCTCAATTT
TGTTTTTTTCACCAATTAAACTCTGCTGCTTCTTTTCATGTGAAAATTGTCAAGCAAGGT
TGCGATACTAACACTAACATCCACACAAAAATTCAGAATATTTTGAAAATATTTACTATT
TTTTCATGTAATTGTTCACCCGGGAGCACGGAGCCAAAACTCACGTCCCTGATGCGTGTT
CTAAACAAAAGATCACCATATCAACCAAAGATGAGATCGATCCTGTGCCGCCTTCAGACA
ATACAATGGCAGACATGCTCGGCAGCAAGCATATCTCTCTGACTCTGCACACTGGGTACA
ACTGGTCTGCTGTTAACCTTACTTAATTATTTCCGCCATTACAGATCGGCATCTACTGTA
TAGCAGTATAATACAAAGGTCATGCATATATATAACACTATATGATCCATGATCACCTAC
AACAGCAGCAGTTCTAGCACTAGGACAACAAAAACAAAAACGGAACCATGTAATACATGG
AAGGTGACCAGGCACATAACAACAAAAAGAAGCAAGGTAATCAGAAAGGAAGGAGCTTTA
CATTTGATGACAGTAATGGCTTGCACGGCTGGGCTTACTCATCAGTCCTCTCACATCTGG
TTCTGACTGAACATCGTCCCCACATGGCGCCAATGCCGGTGCCACTGCTACCTACCATGG
CTTCAGGTCGCCCTTGGGGCCCTGGGTCCAGTTCAGCGCCTTCTGCCCCGGGGTCAGGTA
CACGCTCTTGCTGTGCGGGAGCTTCCGCGCCAGCCCGTTCAGGATCTGGTGGAAGGCGTC
CCCGGCCTGCGCGGGCTGCGGGAACAGCATGGCCTGCTTCATCGACGGGTTCGCCAGCAG
CCTCTGCTTCCGCAGGATCACCTCCATCGGGATGGACGTCAGGATGGTGTCAAGTTTCGG
GACGTCGTCCTCCGCCACGAACACGCCGATCTCGTCCCACGGGATGGCGTCCGCAAAAGG
CAGGACGATGTCGTCCGCGATGATCACCGGGATGCACCCGAACACCACCGCCTCCACGAG
GCGGGGGCTCCATGGCGCCCACCCCAGCGGGCACAGACAGAAAATGGCGCGCTGCATGTC
CTCGTAGTAGGTGGGTGGGTGGTCCGTCGAGATGTCGAACAGAGGGTTGTTCTTGAAGTT
CTCCCACACCGATGCACGGGCGCCTCTGCATTGCATATATAGCAGGTACGTCAAGACTTT
TGTGCCCCAATAATTCAATGGAAAAGATTATGAGGTACTACCATGTTTCATGTGTGCATA
CCTTGCATAGTAACCACCCTCAGGATCATTCGCAGTATCGTAGAACAAACCCCGGAAATA
CACAAAGATGGACCGCGGGGTTTCCGGGGGAACAAGGTGAGTTTTCATTTTCTGGGGAGG
AGCATATGGTGGGATGTTGATTGAGCCTTCCTTTAGGCAGACATGATCCTTCTGCCCAAA
TGTCTGGACAAGTGTAGCGCGGCGAAGCAATGGAAGGATCCCCCGTTCAATCGCCTTTTC
TTCCTGAACCACGGCAATGCCAAATGCATGTCAGAGAAAGATTCTACTAGAACAGAGCAT
GCAACTTGTTTCCAAATATCTAACAGAGCATGCAGTTTGTTTCCAAATATCTAACAGAGC
ATGCAGTTTGTTTCCAAATATCTAAGATAAAAGCAGATTATGCTACATAAGCAAATGAAC
GGTTGTCGAAGCGTGGTAGTACAAGTGTGCAAAGTACATTCATTCCATGCTTCAGTGCTA
CTCCCTCCGTCCCAAAATTCTTGTCTTAGGTTTGTCTAGACATGGATGTATCTCCAGACA
AACCTAAGACAAGAATTTTGGGACGGAGGGAGTAATATATAGTAGGAAGATTCAGGTTTC
TCTTCTCTGCTCCATGACTCACCTGATAATGGAAGCATGCCCCAAAGTCATGCGGCACGA
CGAAGAAATGATCAGCACCTGCTGTCCGGTTCCAATAGGGCCAGTGTGATGAGATAAACT
GAACTGCACTCCTCATGATCCGCGGAGACTTGAAGGGCAACGGATGGCCCCACGGAGTAA
GGTCACAGGTGGTGTACACCGGAGTGTAGAACCAGTCGGCCTCCTCCGGGTTCATGGTCC
GGATCGCGCTCGACAGCAGGAACCGGTGCATGAATATCTCGGCGGCAAACATGTGGCTGA
GGCACCTGGAGTCCTTGGCCACCATCTTCTTGTTGTACTTGGTGGGCAGCTCGTAGACGT
ACACCTTCAGCCTCCCGACAGGATCATCCTCCAGCACATCACCAGCACTCCCTGAATTTG
CATCATAAAACGTGATGAGAATCAAGTACTGTCATGGCTGAAAATGCAGAGTTTGAGTGG
GCTGTTGGTCGAATATGGCAACGGTGCAGACAATTTAGACTTGCGTCCAGAATCACAGGG
AGGTTTAATAATAGTAGTAATGATGTGTAAAGTTTGGTGATTGAGAATTCTCAAAAACAA
AAGCAAAAAAAAGTTTGGTGATTGAGGTAGGCGGCCTTGCTTATCTACAAAGTCAGACAT
GCTCTCACTGTCGGTGACCAAAGTTGGAACATGCGGCGCATAATAAAAAAAAATCCTATC
AGGGTTTCGAGATCTTGGAACGAATTGGTCTAGCGGCGGCAGATCTCATGCCGCCCGCCT
TCTTCCCCAACCCCAACCAGCAGGATTCGCTCCAAAAGACAGTACGGACGGACGCCCCCA
AATCAGATCCCAATCACCACGGAGGCGCACGCGGAAACGCGGATTTTGGGGGATCAAACG
AACTCGGCAGCACAAGCATTGCAGCAGCAGGAAGAAGAGCAGTAAAGATTACTAGTAGTA
GAGCATCAAAAGCTGGAAAGGAAAAGGGAGCATTTTTTTTCTTTTGCCTCCACAGCTGAA
TCGCGCATAGGTTGGTATACACACCTTCGATCCTCTCGGTGTCCTGGGCCCTGACGACGA
CGTCGGAGCAGGAGAGGAGCAGCGCGAGCGCCGCCGCGAGGGCGAGCATCGCCCGCGGCT
TCCCCATCGCCGCCGCCCACCCGCAGCTCCCCGTGCGCTGCGCTCCCCTGCTCGGCACCA
AGAAGGGCGGAGGAGACAGAGGGGACGGGCGAATCTGCTGCTGCGCGTTGGCGAGCAGGG
ATGGGAGGGGGCCGGGGGGAGGTCGGAGGGGAGAGGAGAGGGGCGCCGGGTGGTAATAAT
GCGGAGGAGCGAGCGGGGCGGGGGCGGGGGCGGAGGTGGAGGGGGGGGGGGGTGGGAGCC
GGGCCGGCTGTCGGGGTGAATGAGGAGCGAGAGGTAGGGGGAGGAGGGGGGTGGGAGAGG
G