morexGenes - Barley RNA-seq Database

Contig contig_45602
Source Contig contig_45602
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_45602 (9735 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_45602

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_61532	1	1802 bp	MLOC_61532.1	Available	Available	LOC_Os05g48300.1, FRAME:-2, EVALUE:5e-119, 13105.m05132 protein purine permease, putative, expressed
MLOC_61531	1	864 bp	MLOC_61531.1	Available	Available	LOC_Os05g48280.1, FRAME:+1, EVALUE:3e-14, 13105.m05128 protein expressed protein
CDS Structure of MLOC_61532

CDS Structure of MLOC_61531

Contig Sequence (9735 bp)

>contig_45602 9735 assembly3_WGSMorex_rbca.fasta
CTAATCCCGAGCCTGTCGAGCTCCCAACGCCGGCCATCGGTGCGTTGGAGTCGTGGGTGA
CGTGAGGGAAAGATGTAGACGAAGGTGGTGCTTCCCGTGAGCACNGCGCTAACCCTAGAT
CGGAAGGGGTTATCGGTGGGGGGTGTGGCGGCGCGGTGAACCTCGTACCGTGCGCCCCGA
CCCCCACCTCTTTATTTATAACGCAGGTCACAGGGGTCCACCAACCATTACGGGTTGGGC
GCCCCCGATCAGGGCGCATGGATCAAGGGTCCGGTGGGCCGTTGGGCCCACACGGGAGAG
ATCAACCTAACACATCAAGCTAATGTAGAAATCATAGATGTACTTCTTGATTTCCTCCTG
GCCCAACATGAGCCCCAGCTCCGATTGCAGACGTTGGATGGAACACTTACGCCTACGGTC
ATTCGCATATGCATTGAACTAGCGTGTGTCCGCATCCCCTTTGGTAATCCACTTGACCCT
GCCCCTATGATGTCGGTACTCTTCCTATGCGCGAAGCATAGTGACGACCTTGTTCCCATT
CGGCAAGAACACGCACTAACAAGTCTGCACATGTTTGCCGCATGCAGGCACAATCCAAGT
GTGCCTCAAAAGGGTCACGCGAATTACTAGTAGACGACAAGGCTAAGGCCTAGCGATGCT
GAATCATCAATATGATCGTCTTCGTGCTCATTAAGGCTGAGACCAAGCTTTGGGTAATCA
CCCACCAATGCAAGGTAGCTGGGTTTCATTATGCCGCGAGAGTATGCTTTTTGTGGCCAT
TTGTCGAGGAGTAATATATATGGCCCTCCTTTGAACCTCTACTAACCTTCATCTTTATTG
ATGAAATGAGCCATATCTTTTGCCTCTTGTTTCGGGTTGTTTTTAACCGTATTTGTACTC
TTCTATTTTCATCTTTAGAAACGGAAGTGTATTTTAACCCTATTTTGTTTCCACCACCAG
TAGAGTACTATCGTCACATTAAGCATCACCAGATTATTCCCAGGATAGATTAAAAAAGTC
TGACCAATCTCCGGCATTATATATATACTCCCTCCGTAAAGAAATAGAAGAGCTAATAGA
TCATTATTTTAGTGATCTAAACGTTCTTATATTTTTTTTACAGAGAAAGTACTCCCTCCG
TCCCAAAATAACTGTGTCAAGCTTAATACAAATTTGTATTAAAGCTAGTATAAAGTTGAG
ACACTTATTTTAGAACGGAGGGAGTAGGATTTATCCAGTGAGCTTGCATATCTGTCAGCA
AACACTCTGGCACTAATGCCACATTAGTACTCCCTTCATCCTAAAATGTAAGACGTTTTG
TGACGTTAGTCAGGAAGGGAGTAGTTTCTATCTAATCCTTTGTTTGCATGTACGTCGTGT
CGTCCATCGTTCTACTTTTTTTTTTTTTAGTTCTGGTCGTGTCGTCGATCGTTCTACGTA
TTGATGCCAAAAAATGATGTTGACCACTTGTCATTTTTTCTTGATGGTGACCAGTTCTTC
GGAGGAACCTCACACCGTCGCCGGCGCCGGCGAGAAGCAGCCAGCGGCGAAGGAGGAGAA
GCAGCAGCCAGCGGTGAAGGAGGAGAGGAGGCAACAGCAGCAGACTCAACGGCTGCAGCG
TCAGGCGTCGATCAAGGCGACAGAGAAGCAGAGAGGGAAGGCGCCCATGGTGGGGGCGCC
GCCGCACGTCGAGCAGGAGGAGGAGGAGGAGGAGAAGGCGGCCATGGCGAGGCCGGTGGT
GCCGCGGATCGTGACCCAGCTGACGCGAGACGAGAAAGAGGAGGACTGGCTGGCCATGAC
CGGCAGCACCAAGCTGCCGCGGCGCCCCCACAGGCGCCCCGAGATAGTCCAGGAGCAAGT
CACCGTACGCATGCATGCATGCATGCCCAAAGCTTTTTTTTAATTATGTTTTCATCTGTT
TCATGCATTCGTTTTGGTATCATTGACACGATCTGTTCGTGCGTGCAGAACATCTACCCG
GGGCAGCGGCTCTCGCAGGTGAAGATGACCAGGTACAGAGTGACCGAGAAGAAGTCCAAG
AAGGTACTGGCCGGCTTGGCCACTGCTATTTACGCTTCAGTTCATCATCATGATTTTATT
ATTCTACTACTCCCTCCATTCCTAAATATAAGTATTTTAAAAGGTTTTACTAGAAGATTA
CATAGGGATGTATACAAACATATTTTAAAGTATAGATTCATTTATTTTATTTTGTATATA
GTCCCCTCATGAAATCACTAAAAAGACTTACATTTACAAACAAAAGGAGTTGATGATTAT
ATATTTGATTGTGATTCACTTTGTTAGGATTATAATTGTTTTTAAATGATTAGTTATTTA
GATCCAACTGCACATGTTATTTCTAAATTTCAAATTGTAATCAGTTTTTTAGAGATGGGA
GTTTGTGGGAGAGGCGAAAGAAGTCGTCGGCTTTCCCTTTCCTGTCTCGTCCCTCTCCTA
GCCCATGTCAATGTGGGCCCCAGCCCACTGATGATTGTGCAACTCCGCCTGGGTTGCCTC
TATGACTGTCGACGCATAGGGAGGGGGTGAGGAGGGGGAGGTGCTCTTACACGTGAGGCC
AGGAGGGTTATGTTTATATCCTTTGACAATGAAATCACATACCAATTGATATTTTGGTAC
TTCACATTACGTGTGGAGCATGGAAAGGTGTGGCTTCAGCTGGGAGGGGTTGACGTGGGT
CGTTGAAGCGTGAATGTCACTAATGTTCGGTTTAAATTTCTATCTTAAATTCACCTTATA
AAATATGAGTTATATGTTTACAAAAAGTATCATTAGAAACTTCTTTCAAATAATACAAAC
CTAATAATACAATTATTATAGCATAATATTTTGCAAGTGAAATCTATATTGAAAATTGTT
CTACGATATGAGAGAGACTGACAAAATCCAGACGGAGGAAGTACTTTGTCTTGGAGAGAG
TTAATTTTCCTAGTACCATCTTGGGGCAAGATTCTTCGTAGCCAAACAAATTAAATGTTT
CATGTTTAGTGTTTTTGGCTTTCAGTTTCTCTCTTTTTACGTTGCAGTGACTTGGCACGT
AGCCAAAATGAATTCTCACCTTGTTGAGTTTTGTGTTGTTCTGCAGTGCGTGGGTGGCCT
GAAAGGCATGGCAATGGACGACGACGATTCGGACTAAACTCGAAGAGGAGCTCGGGCGCA
ACTCCAGCGACACCACAACAACAGGAGAAATGATATTTTGACGGTGCCGATAAGGGGAAG
CAGCAGGGAGAAGAGTGTCAGGGGAAAGAGAAGTTGAAGATAGTGATCATGGAATGATCA
TTCCATGAGTTTGAGTGAAAATAAAAAACCGAAAATGAACTTTCGAGGTTAATTTTGCTA
CCTGATAATAGTTTAGGAAGGTTACATATCATATCTGCTACTAATTGCCACCATACAACA
GACTAAAGCATATCCTAGTGTGAAAGGGAGTTGATGCCTTCCCACTCACACAGGTTCAAG
ACATGATACTTGCCAAAAAAAATGTTGCACTATCGATAGAATAATTGGTGCCTCGCGGAT
GCGGAAGCACCGCTCCATGTTTCGTCTTCAACATTGAATTATACGAAAGTAAGAATTCAG
TTGAGACCCCGAATGTGTTCATATCAACATGGTTTTATGACACGTTCAATGTGATCCCCA
CTTTGGACTGTGAAGGAAGTTTGCGTAGATCGTGCTTGATCGCGGTTCACGGTTGAAGAC
TGCCGGGAGGAGCTTGATCCATGGCATTTGGGACAGATCGGAGAATGGAAGGCAGCTGGA
ACCAATCAAGCTCAGGGTGGAAATGAAATGGGGAGGAGTTTTACGGTAAAGGCAATCTCA
AACAAACAAATTAAGTTTGACCTGTGATGCATAATATGTTTTTATGAGTTTCAATCAAGT
TAAGCTTTCTGGTTACCTTGCTTTGACTAGCTATTTCTCTTCAAGTATGTATACTGCAAC
TTAGTATCTATGAGAACTACACCATTCTTTTACGTTAGGCCAAGCAAAAAGTAAGAAGAT
GTGGAAAATAGGAACTAGAGCAATATATGAGTTTTGTTTTGCCGGTGGATATAAATATGA
TGGTACTCTGATATTCTTATAATTTATGGTGTTGGAATGGTGTATACTGGTGTCAAAATC
ATTATAATGCGAGGCCTCTTATAATGCTTGTATGCAATCTTATATTTGTGGAGTTCTGTT
CATGTACTCTCCTTGATGAATATGAATAAATGCGCCAAGTTGGTATCCATGTGACGAATA
TGTGGTCATTTATTCTAATGAAAGATTATGTACAAAGATGAACATGAATAAATGGGCAGA
GGAAAAATATTCAACAAAATAAAACGGGCATAAAAATGGTCATGGCCAAATAAATAATGA
ATTAGGTGGGCCAAATATTTTGATCAAAAAACACAAATGAACAATATTGTTGGTTTACCA
TGTCGGATCCACGTTGACAACTCATGTGGACCCGACGGTTTGATCCAGAAGTAAGGACTT
GTACAGGATCAGGCCAGACAGGCCTCGGCTCAATCAATGACGACCAGAGAACGTTATTGA
TGTGCGGATTTGTGACTGTTTTCGAAGATCCGTCACACAAGTTAATCTATGGCAACGAAT
ACACTTCTATGATTGTTTTGGAATGATTTGATGGGACGAGAACACATGGATCACTAGAAC
TCTTGTGGCGTTCCATAACACACACATGATATTATTCTTTGCAGGAATTATATACTTTAT
TATAGTCAATGCACTTGTGTATTAACTGTTAGCGATCTTTACTATCATTACAATAGTAGC
AAGACAACAATGGACATTGTGGCAAAGAGGCTCAAGTGTCTTACTAGGAGGTTTCTCCCC
CGTTTTGTGCGACACGCTAGATGCCTTTTTTATCAGCTATTCACACGTTTTTCCTTGTGC
CTCATGTAGTTGTGATATACTGTAACAATTGTGCACTAGTTATAGCAATGTAATTACCCG
CAACAAGTTACAACAATGGTTTTGCATTTATGCTTTTTCATAGTAAAATCTAGTGCGTGG
GAAGCTTTCGAACATTTTGCACAAGGCGCCATAAATCAGTTTGACTTATTCATCATCGAC
GTGCGGTAATTACAAGCAACTGTGTGAAGCGCTCTTATATGTTTTTGAGCCGAAGATATC
AACCTCCATCACATTAAAAATGAGTAACAGTTGTAAGTCTCTTAAAAAAGAGTGTCATGG
CGAAAAAGGAAATAAGGAAGTCCTTTAGAAGACCGCCGCGGGGGATATAATTCTATATAT
CATAGGCGCCAAATGTCAGTTCTGGTGATCTTGACAAGAGGATCGTTACAGCTCAGGTTG
GATATTTGGTTATCTAACAACGAGCATGGGAAACAAGTGAATTCAGGTAGTGCTTGCCAC
ATGAAACAGTGGTGCATGTTCTTTTGCCAATCACCGGCGGTGCATCTTACATGTTCTTTA
CGATTTTGCTATGTGCCTCTGTGATTCTTAGTGTATGCGTTGGTGTTTTGTTTTTTGAAA
AGGAGGATTACTTGTCGGTTGCGTGCATCTTAGTTATGCAGATGTTGTGTTTATATTTAT
TGTATTAGTATCACCTTGATGCTTCACTTTGAATTAACCCGCCCTTTGTCAAAAAAAAGA
CCCTTGTATTACTTAGTATTCTTTCTATCAAGTAAGAATTAGGGATGTGTATGGGTTTTT
TTAAAGGAAAAAGGAACATGTGTTGTTGGTGTCTAAATATAACAGTAGAGATTAATTTGT
GGAGCGGCAGATGTTGCTTGTTTGGTCATGTAACAACGAGCATGAGAAAGAAGTGAATCC
AGGTGTTTGTCACACCACACACGGCGGAAATGTTTAATAGTATATATTGCGGTGTGTAAT
TGTATTTCTTCCTATATCAAGTAAAAAATATGCAGTCCTATACTGCTGGTGTCTAAATAT
AAGTGATGGTCCATACCAATAACCGATACCTCATGTACATACAGTATAAGGATAAGGAGC
AATGGCATGAGGCAAAAGATCACACAGTTTCAGAGCAGGCCATTTAGCTAGCTCGCTAAC
TAGGTAGACTATTGCCAATTGATATGCATTGCAGGAACAAAGCAGGAAAAAAATTACCAT
GTCGATCTCACGCAAGATATATATATATATGGATGCATGACATGTCGCTGTTGATGGCAC
GTACGTACTACATTAATGTGCAAGTTTTTCACACACCCATGCAAGTGCAACATGCATCCA
TTCGGTGATAAATCCTGACGCCAAGATACGTACATAGCATAGCAGCCCACGAAACAAGCA
TCGGTCATCATCACCACACCATTCTTGTCTCCTTGTAAGCTGTAAATATAACTCTTTTGC
CTACACGACGTAACATGACACGTCTACACCTAATGCATCTTCAATACTGCATGCCACTTC
GCTTTCTCGGGGTACCAAGAAATTTTCAGTTTGCATTGCATTCTTGTTGCAACGTACTCA
TCGATCACATGGTTCGTTCGTTCGTTCGTTCGTACGTGCCCCCTGTGGCCGGCCGGCGCT
GCCCCGTTTGCTTCAGACGGTTTCGGCGGCGTCGCTTGCCGGCTCGCGGCTGCCGGCGGT
GAGGCTCTTCTGCTCGCCGTCGTCATGGGCGGCGGGGACGATGGCGTCGTCGTGGTCGTC
CTGATCATCAGCGGCGGCTTTCTTCTTGCTCTTGGTGTACTCGCCGTAGAGGTACGAGGA
GAGGCCCCAGACGCAGAGCGTGGTGGCGACGGCCTTCTCGGCGCCGAACGGGTCGCCGAA
CACGACGACGCCGCCAATCACGTTGGCCGTGAGCACCGCTGCCATGCACACGCCGCTGTG
GAGCGACGACGTTAGGTAGATCACGCCGGCGGTGCCCATGAAGCACGCCTGCCACGTCAC
CACCAGCGTTGCGACCACGACCCAGTACACGGCGTGCGACCCCTTCCAGTGGGCCACGTC
GTTGCCGAAACCGCCGGTCGCCGCGAGTCCGATCGCCGCCACCACGGACGCCATGGCCTG
CATCACCGCCTGCACCTCCACCGCCAGGATGAACCCGCCGGAGACCGCCTCCCGGTACAG
CAGCTCCATCACCGGGAGGTACGCGGAGAAGAGCCCCGCGGCGCCGAGCGTGACTACGAA
GCCGAGGATGTACCCCTTCCGGTCCGGGCTCTCGCCGGCGTCCCCCGACCGGAGCGCGAG
GAGCACGGAGCAGAGCGTCATGAGCACGACGGCGTTGAGGTTGACGAAGGTGAGCGGGTG
GCGGACGATGGCGACGGCGAGGACGAGCGTGAAGGCGAGCTGCGTGGACAGCAGCAGCGA
CGAGGTGGACACCGGCAGGAGCGACGAGCTGTAGGCGAAGAGGAGGTTGTTGACGCCCAT
GAGGGCGCCGATGAACAGGCACACGGCCAGGAACCGGCGCGAGAACCAGAGAAACGGCCG
GGGCGCGGAAACGGGCCGGCCGGCGAGGAACACGGCGACCACGAGCGTCGGGAACCCCGC
CGACTGAACCAGCGTGACCACCCACTTGTTCTGCCCGCCGTGCTCGAAGTAGAACCGGGA
GAGCAGGCTGGAGACGACGGAGCCGACCAGCAGCGCGGCGTAGTTGGCCATCAGGAGCAC
CGTCGACCTGCTCCTGCGGCGCGGGGCCGCCGCGGCCGCGCCCGCCGGCCCGGAGGAGAT
CGCCATTGCCGCCGGCGCCGCCAAGGAGGAGTAGGAGGTGTCGTTGGATGGATGGCGAAC
TGGCGATGGGCGACGGAGCTTGTACATGGGCGGCATGTATATATCGGGCGGGTAGGGGGA
ATTTTCTTGTTGGGGGAAGATCAGTGATCACAAAATGCCATCCATGAATCACGCAGAGTA
AGGAAGATTTATAGTAGATGGTTTTTTTACACTGCTGCTCCTTCCGTTTCTTGCTTTTCC
GGGCGGCCGGGTGTGAAAAAGCTAGGCGTCAGTTACAACTTACAATACGTTACTAGTCTA
ATTTTTAAAACAGTATATACTCGTGTATATTTGGGAGGGTCACATCAAAGCTGGAAAATT
AATGATCAGCTCGAAAATACAAGATTCAAGCACCAGGACTTGAATCTGACGGACCGGGAT
ATCACCGTCCTTCTAACCATCCAACCACAATATTTTCTTCACTGAGGCATGAGTAAGCAT
TGAATTAGGAAATACAAAATTACTACATGTATATATGGATGTATTCATGTATTCATTGCT
CAAATCCACACAAGGAAGTAGTGGTAGGAGCCAATTAATCGACAATATCCTTTAATGTAG
TAGCGGAGTAGTAGTATATCTCTACATATATATCCCCAAGTTAAATCGATGGATTGATTG
TTGGTTCACAGCATATATCGCAGAAGATCCCAGAATCAGTTGCTGAACATTTGTGTGGAA
ATGCACATGTGTATCCTCCCACAACGGTTTGGTTGAGACGCATAGGGGTCGTTGAGATGG
CGCTGGGGTGGTAAGCGGAAAACAACGGATTGGAATCTGCCTTTCTCTATTTGCTTCGTG
TCCAGCATTGTCCCGTATCCGTTTTGGGGGTGGGCCGGATGACTACGTAGTAACCAACGT
ACGGGAGCTATCGATCGACGGCTCGCCTAGCGTTCACATGCGGTGTTCTTGGGTCATGCA
TGTGTGTATGCAAAGCAAGCATGTGCTTAAACCCAAGATCTGAAAACCGCACACCGTACG
TCCTTCTCTCGGAGACAGTGAACTGATCATATCTCATCTCATTGGCTCAATCATGTGCGT
ATCTGCCATGGGCACACAAGAGCGCAACCAAATTAACCCGAAAATTGTTATCATTAGAAA
ATGGTTGTGCCTAGCTATTCTAGATGAGAATTAACAAAGTATCGTCTAAGTGACGTTAGC
GTGAAAAAGAAGTTGTCCTATAACTCCTTTAGAAAAAAAATATTAGGTCTGTATCCTGAA
AAAAGGATCACACACCCGTGTCGCCTTCATTAGGCGGCTCGGGCTGGAACCCAGTCGCCG
CCATCTATTCCTTCCTCCCCCACATCTCGTCGTCATTGAAGCACCCGTTGACGATGCAGA
CATAGGCTCCGAGGAAGGGGTGGAGATAGGACCCAGGCCCAGGGCCTGGGCCAGAGGCAT
GAGGCCCTACTCTTTTGGTGACTGTAGCAATACTCAGGATGTAAGGCCCAAATCTAGGTA
CAATGCTTGAATGCGGCTCGGGGCTGATGCTGGCCTGGCTCCGCCCCTGCTATGAGGAAC
CGTACAATAGTTTTCCTTTTCACGTTAAGACATTGCTTTAGTCTTGTATGAATTTGCTAT
TTGTCAGTGTGTTTAATTGTCTGTGTAGTTGTGTTGGTTTTATGCATCCTAGTTATGCAG
AGTCAGGATGTGTATTTATTGTGTTTGTATTCACTTGATACATTATTTTGAGTCAATAAA
ATTTATCCTTTATTGAAAAAGCATGAAAGAAAAGAAAAACCCACACGAATTCCACGATAA
GTTCGAGATAGAACATGAGTTTGATGAGACTTCACTAATTTTCATCTAGCAATTCTGTTA
CAATAAACAAATAAATCGGTGTGCTCTTCTGCATTAGAAATATTTTTAGAGCCAAATCCT
TCTGCGTTTCAAAGTACATATTGCATTTGTTCGGTGCGAAAAGTTTGAAACCAAATTGAT
GGGGTTATAGTCCTAGGGTAGGGTTATAGACCTGCCCTATAGGCGGACCCCAAGGTCGTA
TAACCTCGTATAATG