morexGenes - Barley RNA-seq Database

Contig contig_45565

Source Contig contig_45565

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_45565 (4354 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_45565

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_61494	1	441 bp	None	Available	Available	None
MLOC_61495	1	2072 bp	AK369821	Available	Available	None

CDS Structure of MLOC_61494

CDS Structure of MLOC_61495

Contig Sequence (4354 bp)

>contig_45565 4354 assembly3_WGSMorex_rbca.fasta
CCGAGCTGTCGCCACGCACAAGCCCGCCAGCGGCCCTGCAGCGGTTCGGGGTGTGTGGCG
CCCCGGCCGCGGACAGCCAACCCGGCCGTCGTGCGCGTCGCCGGGTCCACCAAGGCGTCG
GCGCCGCCCGTGGTGTGCGGCGCACTCCGCGCGCTCCTCGGGGCCGTCGCCGTCGACAAC
GGCACCGCCGACGCCGCCGCGGAGGTCTTCTGGCGCCTCAACGCCGCAACCCCCGCCGAC
ATGTGACGCGGGTACGAGTAGATCGTTCAAGACGGTTTGCACTTGCACATCAGTGTTCAC
AAGTGCTACAGAGTACTACTACTATGTTTGAGGATAAGTGAAGCTGCAATCAAACTCGTA
TGTAAATTATGAACTGCCACCTAGAGCTTGGATGAAAATCATGAACTTGGACTTCGATTT
TGTATGCAAATTATGAAATTCCACTTCGATTTGTGCTGTTGTTTGGTGTGATATCCATCC
AGATCCAGGAATGCGCCATCCAATTTCTGATTTCAGATGGATCATGGAGCAAAAGAGTTC
CTTGTCAAATTCAGTAAACCTAAACCCATGTTTGATGTTGAGAATCAAATGTTTCTACTG
CATTTGGCACTGCCAAACAATCTCTCTGTTGCATCTGCACTCAAACCACAACAAGAATTA
TGGAATGGAGAAAGTATTTACCAAGACAATTGATTTTTTATTTTTTACCAAACATGCTAC
TTGTAGTTGTATCACTTGATTGACATGGACCAGCATGAGAACAAGCAAGGCAAAAATGGT
GTCAGTACATGATGTTTACATAGATAAGCATCATCTTGACATTAGCACAGGGGCTAAGAC
TCCAAAGGCAAGTACCAAATGACTACACCCGACTCTTCTCCGCATTACATTAGCAATGTC
AACCTCGTATTTTTTTTTCCCTCGCCGAACCAAAGGCCATCAGGGATTCATTTCATCCAA
AACCTCACACTCCTACTACGAAGTGAAGCGAACGATCCATCACAGGGACGGCTACTTCCT
CGCCTTCTTGCTGCGGTGCGTGTTCTCGGGTGTCGGGCCATCCTGCTTCCGTTTCTTGGT
CAGCTGCTTCGCCTTCCTTGCTGCCACTGCGGGCCGCTTAGATTTGCGGGCACTCTCGCT
TTGTCCCGTCTCACTAGGCCTTCCCTGCTGATTCCCTTGGTTGACGGGGCGCCGGGCCAG
CTTCACCTTCTTCACGACGCCAGATTTGGTCGACTTCAGGCCTTGGTAAGACAGACTCGC
CGGGGCCTTGCGTTTCTTGCTGTCGCTGCCTTCGCGGGACTTGCTGCCTGGCGTAGAAGG
GGTCTTCTGTTTTGGAGTGCCGCGTGTTTTCCCAGCAACCGTCTTCTTTGGTGTCGCGTC
GGCTGCTTTTGCATGGGTGAGCCTCAAAAAGCGATCTCTAATCTTAAGGCCCCGTTTTTT
GACAACGGAGTTAGCAGCTTCCTGCATAACACACATTGAAACAATTATGAGATCCTGATG
AGATAACAATGCATGGAGATAATGTGGAAAATTGTTCAAAGCATTTCACAAGATGATAAC
CAAAGGTCATTATAAGATGTTATCTTCATCAGAATAGTATCATACGGTATATAATCAGAG
GATAAAAGAAATGAACCGGCTAGGCAATTCTAGTAAACAGATGCAATTGACAAGCCAGGA
TCACAATAGGCCTTCAAAGTAGCAGATATTGTTACCAAGCATGAATGAAGTTTACTACTC
TTAGCTAGTACTACCTCCGTCCGGAAATACGTCCTAGAGATGAATGTATCTAGACTTATT
TTAATTATAGATACATCCATTATATGCATTTTTAGGACAAGTATTTTCGGACGGAGGGAG
TATTACTTTTATACTACACTAGAGTCAAAAACGCTCTTATATTATGGGACGGAGGGAGTA
GTTTATAATTGAATTAGACACTTTTTTGGACAAAACTTTGTAAACTTGTCATGCTAACAA
GATTCTATCATTTTTTTCGTCCTGCTCAGTAGGTAAAAGATAAGCAACACTGAATGAACA
TTGTAAGACACAGCCTGGATACAAGAGAACTCAGTGGATAGATATGCAGTTCAGCATGTA
TCAGGCTGAGTCCACAATTGGCTTAAACATTTACAACCCTGCTTATAACTGATGTTCCCT
TTGTAAAATATGCAGTTCAGCAAGAAAATCTTCAACTTATCCTTAACCGTACGACATGAC
TAACGATGCTATCTTTCAGTAATGTTTTGCACAATCATGTAAAGTAAAACAAATTAACTA
TCCATAAACTTCTTATGCACCCGACAAACTTTTGACTGTTGCACAGAATTAGAACTCAGA
ATAACACAAAAAGAAATAGGAAGGATAAGAATTATACCCTTGTTTTGAATAGAACATAAG
CGATACCCTTTCCAAGGCTTGAATCTGGATCTCTGACAACACGTATAGCTTCAACATCAC
CTTGTGGTCCACTGGGACCGCAGAACAGCTGGTAGAGCTCCTCATCCTGATGTGCCACCA
AGAAGCAAAGTTGACACTGGATACTTAGTTTATGTGGACATTGTGGTGTTACTGCTATCA
TTTCTTTAAAAAAGAACAACAAAGAGCCATACAAGAATGGACACATCATACATACCTTTA
CATCGAATGGAAGGTTACCAACAAACACTGTCCTCTTTCTGTCATAAAGAGGTCCTTCTC
CTTTTAGCTTTTTACGAGGCGGACACGCCATGTCAACACGGATGTGATTGCCATTGAACT
AGAAGATTCAAAATTCATATATATATACATTGTATTATTAGATATAAGACATGACACAGA
AAGTTCTTAAAGATGTACTTAAGCTTTAAGAAGTAATTTCTTATCGGTTGTAACTTGTAA
GACAAGGAACACACCAGTGCCATATTATGAGATAAAGCTGTCCGCGCACACTGCTCATCT
TTGAAGACGATGTAGGCATGCACACTGCAAAGGATATAAGAAGATAAGAGTTTGAAAAGC
AACAGGCATACAGTATGTTTGTGGCACAAAACAGCTAAACAACTCCTTGTGTTCCATCAT
CGTCTTACAACATAGTGGTCTATTAATTTGGACACATATCAAGTGGCGGTACTATTTATA
CCAAGAACACGAAAGCTATGAAAACGCATACAAATTCTGTGTAGGATGTGCCTTTCTGGT
GTCACTGTGCTAGATATTTGTGCGCCAGCTCAGTACCATATAGCATAAGCATCATAACAG
CACAGAGGGACTAAACTAGAAATGAAAACGATGAGTTACTTTGTTTTATTATGGAAAGTA
GTATATGGAGAAAAAAAAAAGGAATTATTACATAGATGTGTGAACAAGGGACTGCAATAG
TTTCACCGAAACAAACCAATTTCCATGCAAAAATTACTTTCATAACCTTTGGATCCCAAC
TCCTGAGCTATGGCTATTCTGGTTTATTTTTACTCAAAATTATGTGATGCTGAATATTAC
TTAGATACTTTTATCTTTCAAGTATCAACAGGAACTAAATAGAACATAATAACATATGCA
TATTAACAGCTCGTAAAATCAAAGGATAAAAATGCAGCACCAAGTTAAAATGAAGGCCAT
TTAAATGTACAGAGGAATAATTAGTCATTGCAGGAGTAGCACAGAAAGACCGAGCCCTAA
TAACAGGGGAAGTCCTGAATTTCTAATTGCAGTCAGGTGCTTGTTACATTAAGAAATTCC
AACTGAAATTTTATGGCAAACAGAACAAAGCAGATAACAAAATGATCTAGTAATTATCCA
ACTATAGCATGAATTCCACTTGTTAGACAATAATGACCCGAACAATGCATCGCTAGCAAT
CCATATTATATGTAACGCAATGCACTCACTTGTCGACCGAGTCATTGATCTTCCCTTTGA
TGACGGCCCCCTTCCGCGGAATCTTGGTCTGCAGCGAGCACACAAACAGATGACCGATTA
GCACACGAAGGCGAAAAAACCATCCCCAATAGCACAAGAAGGGACCCAATGAACGGCACT
GACGTCGCCGAGGGGCACGGAGCGGATCCTGACGGAGTCGACCACGCCGAAGGTGGTGAA
CTCCTTGGTGAGCGCCTTCTTCTTGGTCCGCAGCGGCAGGTTCCCGACGAAGACGGTCCT
GAGCAGCTTGCCCTCGTCGTCGAACGCCTCGTCCTCCTCCCCCCCGGAGGCCACCGCCTC
GACGTCGTGGGTCGCCTTCCTCTTGGCCCCGACCACCGGCCGCGACCGCACCTCCTCCTC
CGCGGGCGCCGCCCCCAGCGTCCGCCGCTCGTACCCGGCCTCCACCTCGTCCCGCTTCCT
CTTGCGCCGCGCTGGCGGCCCCTCCCCCCCCCCC