morexGenes - Barley RNA-seq Database

Contig contig_45530
Source Contig contig_45530
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_45530 (6686 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_45530

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_61466	2	2199 bp	MLOC_61466.1	Available	Available	LOC_Os05g34550.2, FRAME:-1, EVALUE:0.0, 13105.m03595 protein MLO domain containing protein, putative, expressed
CDS Structure of MLOC_61466

Contig Sequence (6686 bp)

>contig_45530 6686 assembly3_WGSMorex_rbca.fasta
ATCTACACTCTAAAGTATGTCTATGTACATCCGTATGTAGTCCTCTAGTAGAATCCCTAG
AAAGACTTATATTTAGGTAAGGAGGGAGTATAAGAGTATTTGGATCACTACGGAGGGAGT
ACCAGCTAAGATACCCCACTATGGCCAGCCTCGAAGGGAGTATGAAGATGAACTCATGGC
CCTTCGATCAGAATCAAACCACTCGCAAAATGGGCCAAAACATTTTTTTTAGTTGACTGA
TGCATAAGTGGTCTATCAGATAGTTCTCAAAGAAAAATATGGTCCATCAGAGAATTATCG
CCAATCGGGATCAAACTGCGCCAGAAGCAGCCGAAGCAGGACAGTTTAGGCACCGTCACT
GCGAGAGATAAACTTTTTGGACCGGATTTCTTTTCTGACCTTGCGACCGCAATGTTTTAG
GGCAGCAAGAAGTAAATCTACCTGTATAATGATAGCACATTCTAAGTGCTTTCATTGCAG
CACCAAAATAGACATCATAGCCATTGTTCTAGACAACGCTACTCACTACTGATGCTGCAT
CATTCTATGCTTTCACCGGGGGCGTCGTTGCCTTCCCGTGCTGGTCGTTTCATCATTTCA
ATCTTAGCAGAAGGCCCTGCTGAATTGACGGCACCCGTCGATTCTGCCGCGCCATTGCTC
TTCTTGAATCCCTTCTTCATCTTAGCCTTCTGAGCCCAACCCAGAACACCCTGCTGCACA
TGCTCATTGAAGATCTCCTTCTTGTAGAAGCTTCCCATCTTTGCACGCAACAGAAGAAAA
CATGCGTCAATAATCAGCCTTAATCAGCGTCGACGACATTAGAAACATTTTTTATGCCGA
AATATGGCCGCACCTGTGTTACAATTGCATACAGAGGCAGGGTGCTGTAGCTGCAGAGAA
GCTGGATGATGAGCCTGCAAGTGCAAGGATGAATGGATGCATGAGTTCAAGAACAAAGTC
ATGTTCGCTTTTCCATTTGGCAAAAGAAGTTGGAAGACGTGTGTGAGGTACCCAATAACA
AGCCTCGGCACAATGAAACCGACTTGCCCCATGATGCAGGAGTTGAATCCATATGTGGTC
TACAACAGAAATGGGGTAAACGAATCAGTCATTAGATCCTAACCGAACGTAATTTGAAAG
TGGCATCCCCCCAAGATGCTCACCAGTATCCAGAAGAAGAATGCAATCTCAAAGGCGTTC
TGGAAGAGGATGAAGTGGATCAGGAATAGGACGATCCTCGGCCGCCCAAACCAGAAGTGG
TCATCTGATGGCTTTACGATCAAATCGCCCTCGACCGCAGAGTGCTTCTCAGCTACATCC
TGGGCTAACTGAGCTATGACGTGCTCCAACTTGGTGCCAACGGCTAGCAGAAGCTGCAGG
GCGAATAGAGAGTGAGTAAGGGCGGTATAAGAGGTTCATATTAAAGTAACACCAAATGTA
TGTATGCACTTACAATAAGGGGAATGAATGCGATCCAAAAGTATGTGTGCCACCCTGCAG
ATTAGCCAAATGTGGTGTAAGGAAAAAAAAACTTAAATACTGAAATATATTACTGACAAG
GTTTAGTAAACCATCTTGGAGAACAAAACCATTATCATAACAGGTTCTGGTTTTTACATC
CGTTACCAGCGTAACTGCTAAAGAATCTAGTTCAATTTTGGAATCTGTAAACATTTTACA
TTGCCGTTTGCTAGATTACAACATTTTATCTTTACTCTCTGTTTCACAAATTGAACAACT
TTCCAGGAAACTCTGCAGATTTATAGTGTATTCCAACATGATTTTTGAACTTCAGTCTGT
GAAATTTTTAAAACTAGGTGATCAGGAGGCAAAAGCAATCATAGAACATACAAGTGCTGT
TCAGAAAAGATGAACTGCAACTTACCATTAACATTCAGCAACAGAAAGATCACCACGAAG
ACCCACAAGTACCAGCTAAAGGAGAATAGACATGGCATGAGGTGAGCAACTTGCATAGAA
AACCAGCTTGGAATAGTATATATACAAAAGTAGAAATCAGACTCTTTCGATTACCTTATC
CCAACCACCTTCTTAAAATCAGACTCTAAAACCCGCAGCATGTATTTATGGAAATCGAAT
TTCAGGTTTCCACGGCAGTGGGTCTGCAATCCGAAAATGAACTCATTTTCACATACAAGG
AAAGCACTCAAGGCCAGTTTATTACAAGGTATGCTTACCATGATAAAACCAAGACGCATT
GTGGTGTAGTCGGTTTTACTTACTGATCCATAGAACTGCTTGAAAAACGAATGCTGCATG
GAAAATGGGGAAAAGGGCTAATTAGTTCGTCAGTACACGCTTTCAGTATTAAATTAAAAA
TAAACCCTTTCCTATAAGGCATAGAAAACTTTACTAGCCCACACAATTTCGCAACATAAA
TTAAGTCCGACGGAACACAGAAGACCTCATGATTGCTTACCAGCCAACTCAATATTCTAG
AATCTTTGCCGATACCCTTAAAATGCTCCCTGATAAATTCGAAATTGCGTACATTGTTCA
CCTTCTTGGGCCCTGCAGTTTATTATGGAATCATCATCCTGTTACAAATGTAGTGGCTCT
AAACAATGCTGCTTGTTCATCAGACACATATATTGTTTTCAGTGCACAAGAGGGAAAAAA
TACTGCTGCTAACCCACAGTATATCACCTGGCATTGTGACAAATAGTAACAACAAGAAAG
GCTTAAAATACCATTTCCTGCAGTATCTTTCTGAATGGCATCCTCCCACAGTTTCCATTG
ATGTATCTGAATAAGAGAATACGCAAAATCAGCTTATCATAGCATGTGGTACTCCGTGGC
TAATGCGCAGCGCTGTAACTAATAAGTGGCTTACCTTTGCCCCTCCTAAAAGCATTGTCA
AAACACTGAATACAACATGTGTAATAGCCAGCACAAATATGAAAATATGCAACTGATGTA
TAGCTTCAAGGGACATCAACGGAGCTTTTCCCTGTTAAAACAAACACTAGAGTTCATAAC
AGCGTTGATTAAAAGGACTGAAGGTTGTTCAATTTACATGGTGAGAAACTCAACATTATT
TAAGACTTGAAGAGTGGGAAGGATAAATGAAACATGAAGCAATACATCATGATAGAAAAA
AAATTGAAAATGCTGTATAGAGACTTGGAGCAGAGCCATTTGAATGTCCGATCAAATTAA
ATTATATATCAACTTCTCTCTGTAAGTTAATCAGCGCAGCGACATAACTATCCATGCAAC
ATGGTTAGCCGACCTAACCTTAAAGAATGTGATTAAACCGGCCATCCTTATCTGTCTGTG
GCTTTATGTCACTCAGTTATGATGCCCACTCCTTCCACATGCTAGTGTCTAGTGTTCCCA
TTTCATATCATAGTCGGCCGAAATGTACAAGCAAAACAGAACAACGTCACTTCATCATAT
CCTAAGATTGACAACATCACAGGAATAGCCGAAAGGGTGTCCCAGTGGCTATGGCTGTTT
GGTACAAACAATCTTTGTACCAAACTAGCTAAGCAAGTCCTAAGGAAATTAAGTGTTTGC
ATGCTCAAAAATCACAATGGTACCCAACTCCAACTGCACAATGTTGACCCTTCAAAAAAA
AAAGTGCACAATGTTCACAAGTCCAATCAACTCAATGGTAGAGTAGCTTCCAATCCCACA
TCACCCCACAAAAAAAGAGACAATCACAGTTTGCACGAAATCAAACTATGTAATCACCTT
GGACCGGCAGACACCGGCTTCTGCAGCGCCGCCGCTGAGCAGCCGCCTCCCGATTCTGCC
GATGATCTGGGCTGTGACAAAATGCTCGTTTGTCGGTGCCGCCTCACCGGCCCGAACCTC
ATCCTCCCCTTGGCATGGCAGCATGTGGAGTGTCCAGCTACGACGAATGCATATATTCTG
GATCTTCCCCTGGCACACCGTCAGCAGCAGCGAGATGAACCCGAGAAGCATCAGCTCTGC
ATTGCGCCAAGGAGCAGTTGATGATAGATACATCCAACATGGAAGACAGGTACAACCATG
CAATGTCAAAATTCAAAAAGAGAAGACACATAAAGTGATTGGTACAGTAGCCTTTTGACT
ATTTCTCACAAGGGAACAGTTGGAGACGTCCCTGCCGAGAGCCAGCAACCCCACCCAATT
ACCCATGGTGCAGGGATAAAAAGAGATGTACGCCTTTTGCACAGACCGCACCACCATGAT
TTTGTCGACATGATAGTACTTTCTCCGGGTTTTTTTTTTTTGGGTGGGACTTTCTCCAGT
TCTTGGCAAACGAATGAACCAGGATGCATGCGGGCCATGGCGGGCCAGGGGGAAGAGATG
AATTAGTTACCTTCTTTGACCTTGAGGATGGCCTCGTAGAGCGGCTTCTGATTCTTGCGC
CTGAACGTCTGCAGCCGTGGCAACCAAGAGCAGGGAACGGTCAATGGACGAACACGGCCG
ATGCGGCGAGATGGAATGGCGGCGGAACCGGGAACGCAGACGCGAAACGGCGGAAGGTAA
TGAAAGCAGGCGAACGGGCGTGTGATGGATGGATGGATGAGGGGTTGATTACCTTGCCGA
GGTAGTGGAGGCATCGCTCGGCGAGGAGGGAGATGAGCACGATGATGGAGCAGACGAGCG
CGACGATCCACGTGGGCGTGAACTCGAGCGTCGCCGCCTCCTCCTCGCCGTGCTCCGCCA
TGGCCCTCCCCCCACCCTCTGCTGCGACGGCGAGGCAGGCACGACGATGGTGGAGGAAAG
AGAGGGAGAGACGTTGGAAAACGGAAGCTGGGCTGGGGGAGGGAGGGGCGCCGCGTCCTG
TAGTTTATTAGCAGCAGTTTCTCTCTGATTGGGGGCGGGGCGCGGCGGGGTGGGGGTGGG
GGAGGTAGATAGCCGTCGTTTGCTTAGCTCTTAAGCGCTGGAGCAGGCGTTTCCGCCATT
AATTCTTCAGCTCGCATGATGGCGTGGCTGGCATTACTAGTAGTAGTAAAAGATATTACT
AGTACTATATCTTCAATTTGTTGCTGAATTTGCATGCTCGCGGCTAAAGTTAGGGGGCAA
AAAACAGTGTCGCGCACGCCTGAGGCTCAAGCTTAGCGTCAAAGGCATGCCTTCGTTTGA
TTTCCTTCCTAAATCGTCTCAAGGCAAAAAATTAGTGTCACGCGCTGGCCGGGATGAGCC
AAGCCACGTTGGTTTGACCTGAGCTTGGGTTGGGTCCATGCCAGTGAGGTGCTACTAGTC
GAATGTATGTATAGTATAATCCGCACGAGACAGCAAACTTGCGGCTGTCGCTGCGCGCGT
GACTTTGCCGTGCCGTGCCGACGCGGCCGGCGACCAACCTGAACGTAAATCTCGGCCGAA
CCAGTTGGGGCGTGTTTGATTCCATTAGTAAACGGTAATTATATTGCATACACTTCTCAA
ACGTTGAGGGAAAATAACCTCAAATGCGTCATTTGCAAGTTATTTGATTGTCTGCATTTA
GGATCCCTGCATTAGGTAATACGTGAGTGTAATTTTTTTTGTTACCTATATTGGCCCTAG
CGGCACATGAACGGTTGCATACGGCGTACATGATGTGCTTATCTTGTACCCTACTTGATG
AGCTTATCCTCAATGAGCACACCTAGCACATCAACTCTAGAGCACAACAATGACGATGAA
CTGGACGAAGATGATGAAGTTCTTCAGCTTCAGCCCCAACTGCCGATCCGCAGTAACACC
TTCCACTTTGACACCTCCAACCTTGTCACTGTCAACTCTGTTGCCTCCGTGCTTTTCGCA
CCCAGTCTGAGTAAGCTTGTTCTGCTGCCTGCTTAGTCTTGAATCCTTTTATGGTTGTTG
TTGCTATACGATGCCACTTGTGCACTCACTTCTTTCCATGATTTGTAAACCCCTGGAGCC
TTACCGATGAACACGACATACCACTTGCCCTAGCAATGCACAAAAGCAAGAGTTGAAGCA
GCGAATCAATGGAGCACACAAGTAGAAGAGAAGAAGTAAAGCATGCATGATCATACGACA
TAGAAAGTTCTACATAGCACTACCATGATGTTATCCTACCACCACATCCAAAAGAGGGTG
TCGTCCTACCACCGCAAGTTCATCATCATCGTGAGGGGTTAGTATATACCATCTCACCAA
AATATACAGACCATCAAATAGTTTTTTAGCCCTAACTACACAAAAATGTACGTCGTCATC
GTCATCGTTGTCGTCGTCACCACTGCCAACGCTGTCGGGGATCATGCACGCTCACATGCA
GCACTACTCTAGTAGTAGTGCTTGCCCAACCAGCTCCTGAGCCACAACATCCTGTGAGCG
TCTACCATGACAACGAACCAAACACCCTCGGCCTTGTTGTCAAGCAGGTGGTTGAGAGCT
GCCATGAGAGCCTCGTAGCCAAAGCCACCCTGGGTCATGACAGCACCATACAGGTCAGGG
TGGACGTCGAGGGGCTTGCACTCCCTGATGACCGTTGCCACCTCCTTCACCGCCTTAGTC
ATGATGCAAAAGACATTGATCTCCTCCTCCATCAGGCCTCATCTACTCCTCTTCCTATCA
TGGATGGGGTCAAAGGGTTGTCGAAGGGCTTCTCGAAGTGCTTGTCAAGGCCATCAATGA
CCTTGACGTCCGGGGTCGCAGAGAAGTCTAGCATGGGAGAACCAAGAGGCTTCTCCGAGC
CCATGGTGTTGGAAATATGCCCTAGA