morexGenes - Barley RNA-seq Database

Contig contig_45510
Source Contig contig_45510
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_45510 (9937 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_45510

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_61453	2	3875 bp	MLOC_61453.2	Available	Available	LOC_Os04g58910.1, FRAME:-1, EVALUE:0.0, 13104.m06207 protein receptor protein kinase TMK1 precursor, putative, expressed
MLOC_61452	2	608 bp	AK359921	Available	Available	None
CDS Structure of MLOC_61453

CDS Structure of MLOC_61452

Contig Sequence (9937 bp)

>contig_45510 9937 assembly3_WGSMorex_rbca.fasta
CCTCGCCGACCCCTCCCTCACCAAGGCCCCCCCCCCCTCCCCTCCCCCCTCGCCGTCCCC
GTTGACGCTCTCCATGCCCCACTCTCTCGCTGATCGCTTCTCTCCTCCCGCAGATCTTCT
CCGCGTCCAGGATCGACATCCCCACCGCGTGGCAGATGCCTCAGGTACTAGTACTAAAAC
AACAGTCTGACGGCCAGTGAAACTCGTCGTTCGTCAGCCTAATTATCGATTACTACTATC
GTTGGTGCTGCATCCTGGTACGCGTGATACCGGACCGTTGTTGATTTTCCTAGTGTTCTG
TGTCGCCACAGGGTGGGATAGACCCAGGGGAAGAGCCGCGAGCAGCTGCCATCAGGGAAT
TGAGGGAAGAAACCGGTGTTAGATCCGCCGAGATTGTCGCCGAGGTCAGTCGGCACTCGG
CAGTCCATCACTTTCTTCACATGTTGTTATAATCATGATTTACTTTCAAGCATAGCTGGA
ATGAATTGGTCAATTTCAACTGTCTTAAGTAGTGGTAAATCTCTAGTGTCTCTCCACCCA
ATATGCAGCTAGATGAATTTGTTTTCGTAACAAAAAGGTTTCTTGCTGATCGCTTCGCGT
GTGTCCGTGTAGGCCCCCAATTGGTTGACATATGATTTCCCCGCGGATGTCAAAGACAAG
CTGAATGCTAGGTGGGGAACAAACTGGAAGGGCCAGGCTCAGAAGTGGTAAGCCTGCTGT
GTTGCTTGTGCTAAGAATGATGCCTAGTAAGCACAGTTTATTGCTGGCTTTTATCTGTTT
CAAGGATAGTCCTACAAGAATCATTTTAATGCACAGGCATACCAATTGACACTTAACAGA
CAGAATACTGCAACCCCAAGATATAGCTGCATAGCCATAGCAGTTGCACAACTCTCTCTG
CCCAACAACCACACTATTATTCATGACATGTACTCCCTCCGTTGCTAAATATAAGTCCTT
TTAGGGATTTCACTATGGACTACATACGGATGTATATAGACATACTCTAAAGTGTAGATT
CATTCATTTTGCTTCTTATGTTGTCTCTAGTGAAATCTCTAAAAAGACNNNTATTTAGGA
ACGGAGGGAGTAGGATGTAGCTATTCTCCAAGTAAATCTGATGTCAGTCAAGTTGTTAGC
AAAACCCATTTGAAAGTACGTCGTACCATAAGTGTCCATGATGATATGACAGCATGCCTT
ATTATATATATCCATACTGACATCAGAACATGCTTCATTATCCATTAAACTTTATGCATT
ATAAGCTTACAGCTACCATGGAAGATTGTATATGCCATAGTTGTATGTAACATAGATGTT
ACAGATCCATCTCAACTTTTTGTATTGTTAGAAGTCGGAGTTCAACACCTTATACCTAGC
ATGTGCTCCTTTACATTTCAACCTGTTATTGCTAACAACTCATTTCACTGGATGCACTTG
TATGCATGTGCGGAGTATGCTGTGCACACTTGTCTTGCACGGTATGCATGTGCACATACA
TGACTCCAGCTGTAGTACATTGGAAATAAATTATATGAGATGCATAGACAAAAATTCAAT
ACAAACCTCCTTATGAAGGAATGGGCAGGAAAGTCTGATGAGACATTAAACTGTGAGATG
AGCATATTGAATCTATCCAACCACTCACATGCACCCATGGTCACGCTTGTACTGATCTGA
AGTTTTCATAATGCATCCGGTTGTATGAAGCTTCCTAATGAATTGGAATCCAAACATTTA
GTTCCCCGTAGCCTGTAACGGTTAGTCAACTTTGGTGTTCAGGGGAACTGTTGAATCCCT
GGTGCTCAATTGTTTAGGTAACGAAAGTCAAAGTGCAGAACTTAGTGCAGTAAGGTCGAG
TTATATCTTTATGTTTGATTCAAATAGAAACGCAATTCATGTAGTAATTGGAACTCTTTC
TAAGTTATAGTCCCTCCGTTCACAAATATAAGATGTTTTGGATATTTCAGTATGGACCAC
ATACGGACTGAAATGAGTGAACAAACACACTAAAATGCGTCTATATACATCCGATTCAGA
AAAAAGTTTGAACATTTTATAATAGTGAACGGAGGGAGTACCTTTGATGTTATCTCCTGA
TTCTGTCTAATGATTTTGATAGCTTAGTATTAGATACATTCCTAATATCTTTCACAAAGG
CTCATGTCACTGACCGGTATACATTTATGGCTGGTAGTTGGTATGCGTGGCTATCCAGAA
TTGGGCCGTAGATATTTCCATGGAGGTATGCTACAGTAGCCAGCATACTCATGCCATCTC
CTCACCCCTCTCAAACTCTTCCATTTAGTCTTGGGGTTGGGCCTATACCACCTGTCACTT
AGGCCCAGTCAGACCTCTGTAAGTTGGAACTTGGTCAGATATTTCTTATTCAGAGTTAAT
TACTGTCAGTGAAATAATCAATTGCCGTCCATTGTTCTTTATTGTCGATGTACACAAAAC
ATTTACGAGTTAATCAGATTTGTGACTTAATCGCGTGCTTCAAATGAGCAGGTTTCTATT
TAGGCTTACCGGTGGTGATGACGAGATCAACCTGATGGGGGATGGATCCGAGAAGCCAGA
GTTTTCCGAGTGGGCATGGATGACCCCTAAACAAGTGATTGAGAAGGTGGTCCATTTGTT
CCAGCTCGATAATAATACCCCAACCCCCCTGTTTCTTGAAACTGGGGCGCCTACTAACAT
AGTCTCCATGTCGAACTCACAGGCTGTTGATTTCAAGAAACCTGTCTACGAGGAGACACT
GAAGCACTTCGCCCCATATCTACAGTCAGATCCAGCAGCTTCGTCATAATAGACTTGTGC
AGCCTCCCACAAGCTTTATTCATGTGTAGGGGAGCTGTGTCGCCAATAATCTCTCGAAAA
TGTACCGGGGCCAGGTGCACGAGTATTTCTGGAACGTCTCGGCATATCGCCACGGGCTGT
TTCTCCCGGCATTGGATCCTCCAGTAGACTGATCATGCTCGATGAGTTGAGTACGCTGCC
GTCGCAATAATAATCTCGCCACAGTTCCCTTCCCGTGGCCTGTTTGGTTTATAGTTCTGG
CAAACCTTGGTGCCATGCAACATGGACACCAGCAGGGGCCTGGATAATTTTCGCCAGGAG
AAAGCAGCACTGCCGCCACATGCCCCTGTCGTTGTCGCCGCAGCTCAGACCAGCAGGTAG
CAGAGCCTTCCTCGAGTCTGATTGCGCGCCGACGCGGTGGTTTTCGGGTGGATGCAGATG
ATGGCCGTGTCCTTGGGCAACAAACAAACAGACAGACTTGAGCAAATGCCTGAATCGAAG
GGTGCTGGTTGGTTGGTTGTTGGCTTTGGGCATTGCTGTGGTGTGGTTTGGTGTGGGAGC
ACGAGGACGATCCGCCCTCCAGGCTTTGTGCCGTGTGGTCTCTCTTTGCCATGATATTGT
CTGTGAGTTTGTCCCGTGGCCATGGGAGGAGGCGTTGTGGCAGTAGTAATGCCATGCGAT
GTGGTTAGGTTAGGTTATTGGGAGGTGGATGGAGATGGGCGGGCGGGCGTGGAGCCTGGG
AGCTGTTAAATGCCGATATAAAGGTTGGGTTGGGCCTCCTCTCCTTTCCGGCGGGAAGGG
AACGAAAGCAAGCAAGCTGGGAGCAGTCAATGTTTTTCGCTGTGCATTCGTTGGTGTTGG
TGTTGGTGGCCTCCTTTGGCCTTTCCTTTCCTCATGAACTGCCTCTATTTATTCTGCCCA
TGGCCATGACACGGCCTTTAATTTTGTGACCGCACCGGCTGTGCTCTGTGTGATGGTAAA
CAGACTCTGCCCATTGCAATGCACCTGATGACAAGACAAAAGCGGAAGCGTATTCTCTTG
ATGGAACGGAAGCTGCCTCCCTGGCAGTGGCAGGCAGCAACACAAGCAATTTTTTTTAAA
AAATAATTGCCGGGGGCAACACAAGCAAATTTCATCGCTGCAGGTGCTGACCTGTGCTGG
TAGAACGGGAGTCTGTTCAAAAAACGGCAATTTCTTTGAATTGAACGAGTTTGTTCAAAA
AAAACTCGTGGTCGACAACAGCATGGCATGGGCAGGGCACCAGGGTAATAGGAGCCGCAT
CTGGGGCCAGGGCAGAGCCCATCACCAATCTCTATCTGCCTCATCTCACAGGGAGTTTTA
ACTGACAGAGCAGGTGGCGCCATCCCGCGGACATGGAACCAGACCAGACCACAGGAGGAG
GCCAATGCCAAGTGGCAGCAAGCAGACCCGGCATGAGGTGGCCACACAAACACAACCACG
AGGGAAGCGGAAGCCAAGAGAAGCTTCAATGATTGCCGTGCCGCTGCCACCACGGCGTCC
GTCAGAGTTTCTCCTGTGCGAACCACATGTCCATGTCTTGTCCTCTCCTCTCCTCTCCAC
ATGCCCCGGCCTCTCCTTAATCACAAGTTGCCTAATAATTCCCGCGCAACTACGTGACGA
TCATGTATCACACCACGTGTGCGTACGCGTACAAAGATCTGCACTGTGTGCATGTGACTA
CTCTCTTGCTACCATCTGTCTACGCATATGTATGAATATGTATCATGTATGTACCCCCTA
CATAAGACACGCTATAAGATTTTTTTTTAGATCACCACCATGCCTACTTGACACACAGAG
AGAAGAAGCTCCATCTACTTTTCGTAGTCGATAACGCTGACGGGCCAACCAACGTGTATC
CAAATCCAAACGTTCCCTTGCCGTAGGGTCGATTATGCTTGACGCAGATGGGCCACCTGA
CAGGCTGACTGATTGCAACCATAACCACCCGTGATGTATACATACATACATACATACACA
CACGGTCGTGTACAGTAGAAATACGACGGACGGACGGACGGCGACAAGACCAAGCACAGG
ACGGGCAGCGGGTGAGCAGTCTCATTATACGTACTGACCGATGTATGCATACCCTCTACA
CCACGAACGTGCTGGTACCAGAACCGTCTCGCAGATGCCACCCAACAGCAGGTACTAACT
AGCTTCTTCTCGAATTGGTACCAGACATCGGTACTGTTCCTCACTCCACGCTCTACACTG
CCTGCTTAACTCCTCACCAGCAATATATGGCGTCCGGACCAAGATTAATAATAGTAGTAA
GACACAGCATCTCACGTGGAGGGTACAAAGCGCAGCATTATTCTGACCTAATGCATGGCA
TGCACACTACTCCCTCCGTTCCTAAATATAAGTCTTTCCAAAGATTCCACTAGTGAACTA
CATACGAATTTATATAGACATAGTTTAAAATGTAGGTTCATTCATTTTGCTCCGTATATA
GACCAGATTTTAAAAGACTTATATTTAGAAACGGAGGGAGTAGTAGCTTTAGCTTGTACG
TACATGGAGGAGCGACCCAACACTTATGCGTGTGTACCGCTAACTTGCTGTACACGATCT
CTCTGAGCTGAGAACAGTGTCACGTGGATTAATTAGCAGAGCTAAGCTAGGCTAAGCAGA
GGCCAGAGGGCTGAGGTCGCTTTTGCTCTACCCCGTCGGCCGCACAGTTATTGCACGCCA
GCTGGGATGATAGGCCAGGTGGCCAGAGAGACACATCATCATCATCACCGTCATCATCAT
CATTAGACAACAAACCGTTGATGGCGTGGATGATTCGTCGACAATGACGCCTGATTACCG
CCCGGGTAATTAGGGTCACCTTCAGCGGCACCGGAGAAGAAAAAGGCCATTACAGCCATC
ACTGGAGTCACTTTCAGCCCATGGAAATTATTAGCGACGTCACTAGTACTAGAATATTAG
ACGTATGTGGACTAGCAATGCAAGCGTGCCACAGCCAAGCAAGAGCCACTGGTTGTTTCA
CATCACGTGTGTATTTTCAAGTGCCACTTGTCGGATAACTACAACTGCAGGCAAAGCAGA
GAACCTGAATGAAGATCAGCATTCATATATTACCTCCAGCCAGCTACTAGCATTGCAGAT
TTGTTTGTTTACTTCTATGTGGTGGTAGCAGATTTGTTTTGTAGCAACAATTATTGAAGT
GTTATTATTATTTATTATTATACAATGGGTCATGGGAAATCAAGTGTGTGTGTAGAGCCT
GAGAAGAGTGGTGCAAGCCTGGAGTGGTACTTGCTGCCCCCTCAACAGCACAGCAGAGGG
CTCATCAAGTCACGATGGACCGGCATGGAGGATCACAGGTGATGTCCCCCTTTGGCCTCT
GCAGCAATGCAGCATGAGGAACCAGATGCCAGAGCCAGAATCAGATTCCATTTTGCAAAG
GAGAGGAGGAGAGAATTCCGTCCCAAGGCACTGGGATCAATCAAAGAAGCATTATATGAT
TTGATTTGATTGCTAGGTAAAAGCCAGAAGCTTCAGTCTCAAGACTGGAATAATTGGAAG
AAAGGGCAACCAATCGATCCGTCCTACGGTGCCCAGTTGAACAAAAAAGAGAACAAAAAA
ACAAGACACGATGTCTATCTACAGCGGCGACGGCAGAAGCACAAGCGCATGGACGACGAC
GACGAACGGCGCGCTCCTTTACTCTTTACCTACAGAAGAAACGCTGTGCGGAAACAGGGG
ATGATGAGGTCCGGGAGAGACAATGTACTTATTTCTTGTAGACATGGTGGCGGTGACGAT
GGGGATGGTGGTTCTTCACCGGCCGTCGGCGGAGGTGAAGGACTCGGCGAACCCGGCGGG
CCGGGCAGGGATGCTGCCCTTGCTGTCTTCGAGGCTCAGGCTCATGATGCTCCCGTCGGT
CATGCTCGCCTCTGACTCCTGCCATCCCTTCACCATCTGGAGCAGTGGCAGGTGCAGGTC
GATGCCCATGTAGTCCTCGGCCTCGTTGTTGGACGGCTTCCACTTCTCCACCATGGGCAC
CAGCACCGTCACGGCGTGCCCCATGTCCGGCCGCTGGGAGGGCTCCCGGGAGGTGCAGTG
GCCGGCGAGCTCCGCGATCACCGAGATGCTCTCGAAGATCTCGTCGGTGAGCTCCAGGGT
CGGGTCGATGGCTGCCCTGAACTTCTCTTCGTCCTTCCTTATCTGACAGAACCACGAGGC
CAGATACCGGGTTTCCTCGTCGATGCGTCTCTCGTCGATGGCCGTCATTCCGGTTATCAG
CTCCATCAGCACCACCCCGAAGCTGAAGACATCTGCTTTTGTTGTGATTTTTCCGGTCAC
TGCAGAGATCACATGTGCAACAACTTATCAGCCACACATTCAGGAGTCAGAACAGCATAA
CTAACATGAAAAAGAACAGATATTTCAGAAGTAAATTCTTCATCGAACAGTAGCTCTTAT
GTGCTGCATCAAAAGGTGGTGTATAAACTTAATGAGTCAAGCTTTTATATGCTGCATCAA
AAGGTGGTTCTAACTTCACAATGTTGGGCAAAGATATATGTTCTATTGATAGAAGAATTG
GTGTATAAACTTGTGCAGTAATTTGCCTGCTAATGGTCACAGGGTTGCCAGTTAGAATGA
CTAGTTCATCAAACATTTCCAATATCATTATCAAATCAACTCAGTTATATCATATATGTG
GTTATTTACACTGCTATTTCAAACATAATGACCAGTTCATTACAAATTCCAAGAGACTTA
ATACACCAGTTCCGTATTTCAGTTCTTTATTAAATAAATGAGGTTACTTACACACTGCAT
AGGCTTTCAGGCACTGATTCAGGTAGACTGTATACCAAATAAAGCATACCGAAAATTCAA
GTTCTACATTATATGATGATGGCAATTAACATCTGATGGACATAACTACAACGAAAGTTG
TGGAGTTAAGCATGATAAGGTAAAATAAGTTGAAATGTTTCATACCGGCATATTCAGGTG
CCAAGTATCCAAAAGTTCCAGCCAGTCTGGTTGCCACGGAGAAGTTGCCGTCCGGTGCAG
ATTTAAGGAGCCCGAAATCTGAGACCTTTGCTCGGAAATCATCGCCGAGTAGAATGTTTG
CTGACTTAAGATCCCTGTGAATGTAGCACTGCTGTGCGAGGGTGTGAAGATATTCCATTC
CACGAGCAACGTCGAGGGCGATGTTGAGCCTCTTCTTCCATGAGAGGGGCTCCAGCTCAT
ACTGCTTCCAATGGAACAGATGCTTGCTCAGCGCTCCATTGGACATGTGCTCGTAGACCA
GCAGCCTTTCATTCCCTTCGCTTGCGTAGCCCATTATTGACACCAGGTTGCGGTGCCGGA
CCTTGGTTAGAATTGCAATCTCTGCTTGGAACTCGTCGAGGGCCTTGTTGCTGATCACCG
AAGACTCCATCCTCTTCACAGCAATCATGGTGCCATCGTAGAGCACCCCTTTGTAAACGA
CGCCGAACCCGCCACGGCCAAGCACATTGTCCTGAGCAAAGTTCTTGGTGGCACAACGAA
GAACCTGCAGGGAGACCATAAAACTGCGTGCCTCGGTCATGTGAATGTCACTGTCCCGGC
TGCTGGTTCCGCTCGACGTAGCGCCGAAGCTGTCATTGCTCGTCATGACAACCTTGACCA
TGTTTTCTGGGTCAGGGCTGTTGCGGGGGTGGACGACCACGGACGAGGTCGCCTGCGGCT
GCACCGACGACCCATTTTTCTTGCAGAAGAGCACCACAGCACCCAGTGACAGCAGAGACA
CCACCCCGATCGCAACCGGAATTGTGGTAGCCAGCAACACAACTTTGCTCTTCTTGTTCC
CTTTGTCGGGAGTGGCAGCCCCTTGGCCTTGTGAGCCGAGCGCGCTTGGCGTCGGTGACC
GAGGGGCGTCCTTGTCCTTGGGAGCAGAACCACCGGGCGACGACTGCGTGTTGAAGTTGG
GATTGCCGGTGAGAATGACATTGACGTCCGGCCTGAATGCCGGCAGCGGCCCATTCAGGT
CGTTCATGCCCAGATCGAGCTTCTTTAGCAGCTTGAGGCCGGTGAGGCTGTCCGGGACAT
GGCCAGTGAGGTGATTGCTGTCGAGCCTGATGTCCGAGAGCGCAGACAGGTCTCCGAGGC
TCTTGCTGATGGTGCCATTGAGGCCAGAGGAAGGCAGGTTGAGCACCGACACCTTGCCCT
GAGTGCAGGTGACGCCGAGCCAGCCCTTGCAGGGGTCGTTCCCGGACCATGAATCGGTGA
GCTTGTGCGGGTAACCAGCGTCGGCGATGAAGTGGAGCAATGCCATGACCTCCGGCGCGC
ACTTGTCCCCGGGCTTGTCGGCGCAGAAGCCATTGTGGGAGATGGTGATGTTGCCGCCGG
CCTTGAGCGCCGGGGCGGGGCCGACGAGGTTGTTGTTGTCGAGCTTGACGTCGTGGAGCA
GCGGCAGGGCGGCGAGGCCGGGCGGCACGAGGCCGACGAGGTTGTTGTTGTTGAGATAGA
GGTAGGCGAGCTGCTTGCAGTTGGAGATGCCGTCGGGGATGGGGCCGGTGAACTGGTTGC
CGTGCAGCCAGGCCTGCTGGAGGTGGGTCATCCCGGCGAGCACGTCGAGCGTGCCGGAGA
GCTTGGTCTCGCCGAGCTGGTTGTTGAGCCAGAGCTTCTGGAGGCCGGACCCCGCGAAGC
TTTCGGGGATGGGGCCGGAGAGCGAGTTGTAGGAGAGGGAGAGCATCTGCAGCCCGCTCA
TGCCGCCGAGGAACCCCGGGATCCCGCCGACAAGGCTGCAGTTGACGAGGCGCAGGCTCA
TGAGCTGCGGCGAGGAGGACGCGAGCGTGGGCGGCACCTCCCAGCCGCCGGACGTCCTGT
TGAGCGGGTTGTTGTCGAGGCAGATCTCCTCGAGGCTGTCGAGGCCGTCGAAGAAGTCGG
CGGGGAGGGCGTCGAAGGCGTTGTCGTTGAGGTATGCGTGGCGGAGGGCGGCCATGCCGC
GGAAGGAGGGGAGCGGGCCGGAGAGGTTGTTGGTCTGGAGGCTGAGGTCCTCGAGCGCGT
CGAGGGAGGCGAAGGTGGCCGGGAGGGCGCCGGCGAGGCCGACGCTCTTGAGGTCGAGGT
TGTTGACCCGGCCGTCGCGGTCGCAGGAGACGTGCGC