| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_45496
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61438 |
2 |
831 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_61438
Contig Sequence (6539 bp)
>contig_45496 6539 assembly3_WGSMorex_rbca.fasta
CCCGCCGCAAGACCGTCACTGCCATGGACGTCGTCTACGCCCTCAAGCGCCAGGGACGCA
CCCTCTACGGCTTCGGAGGCTAGGCTCCTGCCAGCCAGATCCAGCTCGCACCGCTTGATT
GATCAGATTAACAGTAGCTAGGCATTGTTCAGTGTTAATGGTGATGGATGTAATCTATGA
TGTATGCTGCCTTTTCGTTTGAATGGATCAAATCGCAGTTAGTTACCCTTAACCCACCCG
CCTTCAATCTCTTAGCTGATCTACATTTGTGTGTTCTTCATTCTATTTCCATTTTCTTGT
TCTATCTCTTAACTGACGCCAAATCATTCGTGTGCATTCATTCAGTATAATATCAAAAGC
AAAATTCAGTTAGAAAGGCCTGAAGGTTTTGCAGTGGATAGAGAGGGGAATTGAAGAGCT
CATCGACCGAAGAATTGACGCAGCTATCAGACACCTAGTAAGTCCTCAGAGTTTGGGTCA
TCCTTGGGTAGCTTAAACCTTCGAATTAAGTTTGTATAGAAAATAACAACTAATCTACCA
AAACGTATATATATAATGCGAAAATGTGTCCAATGTTGATTCTACTTATATAGGTTTAGT
ATTGTGGATGTTAATATTATTTTTATAAACTTGACCAAGGTTTACCAAGTTTGACTTGAA
ACAAAGCAATTATATGTTGATTGAATAAAAACGGTGAAAATATCTGCGTCACTATGCTAG
GACAATTTATAAACTCTTTTCTTGCAGGTGGCAAGCTGTTGGGGAAAACTCTTTAAGTTC
CGAAAATAGTACTTCTCCAATCTTTTTTACTACTCCACACAGAAGAGTTGTGTCAAGTCA
AATTTTGTGAAGTTTGATCAAACTTGTGTTAAAATATATTAACATTTACAATACCAAATA
TCAAATATATACTTCCTCCATCCCAAAATAAGTGACTTAAAAATGAATCAATATAAGACT
ACATTACATGACAAATTTAATGATATTGATTTAGTATGCTGAGTGTTCCAAAGTATCAGA
TATGACGCGAGTGTTCCAAAGTATCAGATATGGCGCTCGACTGTGAGGTTAAGCGAGGCG
GGGCGCAACGTCTTTGGTGGACAAGCGAGAGATGATGGTGCCTAGGATCTGGTCAGGGAG
ATGGCTGATGAGGTAGGGGCTCGCACAATCGCCACCGTTGACATCCCCGCTCACCGGTGA
TTGCGGATCATCCCGCCTCCGCCTCTTGGATCGGGAATGGACGTTGTCGCCCACAAAATC
CGGCAATTAGGTTGGAACCTTCCGTTCACCCCCGAGCGATCTATTTAACGAGTTTGAAAC
ATGTACGGTTTATACATGGGTATACATATCATAAAAAATCTTCTTTTTATATAAAACTAG
CTATGCCGTGCATTACAACGGAAGAGATATTTTTTTACGAGAAGTAACATGAGAGAAATG
ATGTGTCCTTCAAAAAGAGTGTCGAGAATGAATTACTAATTGCAACGCTTAAATGAAAGA
CCTACCGACGTGCAGCTGGTTAGTCGAACAAACACATCGTAATTACCAATGGCGAGCACG
AATATTTAAGAACATATTTATGTTTTATTTTTTAACTTTTCAAGAAAAATAATAACAAAG
TTCCAAATATTTCTTGAAATATGTTTTTTCTGAAACCTTGAACATTATTTTGAAAATTCT
TAATATTTCCCCAAAAACATGAACAAATTTTGAAATTGGAATAATTTTTGAAAATCAAAA
ACATTTTCTGAAAACATGATCCTTTTATATAAACGCATACAGTTTTTTAATAAGTGAACA
ATTTTTTAAAATTATTTTCGAAAATGTGTTTTTAATGCAATCTCTTTAAATTTGTATCCA
TTTCACTAAAACAACATTGTTTTTGAATGTAAATAACAATATTCCATACATTTTCCAAAA
CGGGAAGTTTTTTGGATTTTGAAAAATATATGAAAATTTGAACAAAAATTGACATACTGA
GGTTTCTGAAAATTCCGAGTTTATGAAAAATAAAAAAAGAACTTGAACTTGGAAGGTAAA
AAAAGGAAAAAAAGGAGAAAAGACCCAAAAAATAGAACACACGATGAAACGAAAACAGAC
GGGCCCATTATTGGGCGACGTGTGCGAAGCTATGACTATTTGATACTCTGTGCGGTAAAT
AGGGTTCTCCAAGCTGGTTCGGCAGGAAAATAAGTGGGCTGGTTTTGCTGCTCCTCAACG
GGCAACCGAGGCACGGAATTAAGTGGGCTGGTTTTGCTGCTCCTCAACGGGCAACCGAGG
CACGAAATTCTGTACAGAGCATTTTCCTTTCCTAGTTCCCTCTAGTTAGGGTTTTATCCT
CTCGGGGCGATTGCGATCGCCGCCGTTGAGACCTGGCCTTCCCTACCTCCGTCATGTTCC
CGTCTTCCTCTCCGTGATCGAGGGCGTCGCGACGCTTGCTGGTCCCGGCGGGGTTGTGGG
AGGAGAAGGATTTAGGGTTCCACTACAACACATGCTCTGTTTTCTCATTGGGTAAGGTTC
TGAAGATTCATGGCGACGGTCACAACGTCATGGTCGGGTACCGCCCCCCCGGACACAGAC
GATGTGAGAACACTTATGCAGGAGCTTTGTCTCCGGGAGGAGGACCTTGACGATGTTGTT
TTTGACGAGGACGTGGCTCCGCCAGAAGAGGCCCGCTGGATTTCGCTTGCACAAGTTCAC
TCGACCAAGACCTACATCCAATATTGGTTTTTCAGGAACATGAGATCAACATGGGATCTA
GCCCAGGAGGTTCAGTTCAAGCCTTTGGAGGGAAACCTATATATAGTTCAGTTTTCTTGT
CTTGGAGATTGGGAGAGGGTCACACACGATGGTCCATGGCACTTCCGAGGGGATGCGGTA
GTCCTTAAACCCTATGATGGATTGTTGAAGCCGTCCACTATTCCGCTAGACACAATCGAG
ATTTGGGTGCAGATACGTGATGTCCCTCCTTTGTATGGCAATCTTGTGCCCCCATTAGCA
ACCAAGGTTGATGAGGTGCTCTATGTTGAACCCCAATCGCAAGATTTTGCGGGGAACTTT
CATTGCGTTTGGGTTCGAATAAATGTTAACAAACCACTGAAGAATGCAGTTTCCATGATG
AGAGATGGGTAGCGTCAGATTTACACGTTGAAATATGAGAAACTTCCGGATTGGTGTATA
GTCTATGACATGCTTGGCCATCTCTACAAATAACACGACAATGTCATACCCCCCCTCTTC
TCTGGTTTTCAAGGACCTCAAGGCTTCCTATAACGAGCGATCTGGTCAGGGCCCTGGTGG
GGTCCGAGGCCGAAAAGGGGGACGCCAGGGAGGCCGTTCTAGTCATGGGACACGCCCTAG
TTCTGACCTTGAGAAGAATGGCTCGTGGGAGGACTCTGGTCTAGTGGATGATGGAGATAT
GGCATAGGCTGTTAGCAACAGGAAGAGATCGCCAACTGAGGTACTGTTTTCTAGACAGTC
CACTAAGGATGCAACTTTGGGTGGGGGTCGTGCGGAGATACTAGCGCTACCCTCCACCCC
TTTTTGTCCCCCATAGTCCAAGCAACAAGTAGGAAGAAAAGAGGGCTAGAACAGTTGCAA
CTTCATAGGAGGTAAAGGTAGAGAAAAGTGGCGGTCTTGGCAAGACTGTCTCTTATTTGG
CGGGCTCTTTCGAGGAGCGCTGCCGGGGCCAATGAATATCTTCTGCTAGAACTGTCGTGG
CGCGGACAAGGCTGCGACAGTGTGAGAGCTTCATGACTTCACGAGGCAAGTTGCCCCTAC
CCTGTTATGCATTGTTGAAACACGGCTGGACAACGCAAGGGTAGAATCTTTAGCTCGAAC
AATTGGTTTTGATAATTCCTATGCTGTTAGTAGTCAAGGCAGAAGCGATGTAATTGGTTT
GTTGTCGAACAATTCAGTTAAGATTGATTTTTTGGGTTATTCCGTCTATCATTTGGATGT
ATACATTGAGGAACAAGGTACACTGAAGTGGAGGATGACTTGTGTGTGTGGGGAGGCACA
AAACCACTTGAGGCATCAAACATGGTCCACCTTAAAGAATTGTAGCACTATGAGTGATCT
TCCGTGGCTCTGTATGCGGGACTTCAATGAAGTGCTTCGGCTGAGGAGCATCAAGGCGTT
GGGCAGCGCAACAACGCCTAGATACAAGCTTTTCGAGAGGTTCTTGATGTGTGCGAACTG
CTAGACTCGACAGGGCTCTCACAAATATGGACTGGCTTGCTAAATACCCTCTAGCATCGA
TCGCACACCTGACGGGGGTTACCTCAGATCACTCCCCACTGCTGCTTGAGCTGGGTAGCG
GGACTGCGTGAGTCCAGTGACCTTTCAAGTATGAGATTATGTGGGAGACACACGACAACT
TTCGCGATGTGATCTCTACTGGTGGTGGTGGGGGGGGGGGGCTGGCCCTCCCTGTACAAC
GGTGGAAGAGCTAGGCAACAAGTTGCATGATCTTGCGAAGGACCTTGGCATATGCAGCCG
CGACACCTTCGAGAGTGTTTACGAAGAGATAAAGAAGCTTAAGCAGAGTCTAGAGGAGCT
CAAGAACGGCCCATCGAGAGCTGGTCCTTCCCATGCAGAGCTAAAGTTCAATGAGCGTGT
AATAGAGATTTATCAGAGGGAGGAGATTATGTGGCGACAGCGAGCCAGGCCCGAGTGGCT
CTCTAGTGGGGATCGAAACACTTTTTTTCCACATGAGAGCTAGCCTCCAGCGCAAAAAAT
ATATGATCAAGGTGCTTCGGAACTCTTTAGGTATGGAGATTTCTGACCCGGAAGAGTTGA
AGACTCTAGCGACTGATTTCTACCAGTCTTTATACCTATCTGAAGGTGTGTAGAACATGG
ATGCGGTGGTGGATCATGTGCAGCGAAAGGTAACAATAGAGATGAATGCAAATTTGTGTG
CACCATATAATATAGAAGAGGTTAAGGCTGCTCTATTTCAAAGGTTCCCTACAAAAGCTC
CGGGCCCTCACAGTTTTCCTGCCCACTTTTATCAACGCCAATGGGAGGTTTGTGGGGATG
AAGTTACAAATATTGTTCACAGAATTGTGACACGCGAGGAGAGTCCAGAATCTATAAATG
ATACGATACTGGTTTTGATTCCCAAGGTAATAAACCCCACAATTCTTGCTCAGTTCCGGC
CCATAAGTTTATGTAATGTCCTGTACAAGATAGCCTCTATGGTCATCACGAACAGGATAA
AAGTTTTACTTCCCGACATTATTTCTGAGGAGCAGTCTGCTTTTGTCCCTTGGAGGCTCA
TCACACACAATATTATAAGTGCTTATGAATGTTGGCACTTTATGAAGTGGTCGAGAGCAA
AATATAGTAGTTACTGTGCCTTGAAGCTAGATATGATGAAGGCTTATGATAGATTGGAGT
GTGCTTATCTGAAGGGGATGATGACCAAGCTGGGTTTTGAACAACGTTGGATTGATATTG
TCATGGGCATGGTCTCATCAGTTTCTTTTTTAGTTTGATTCGATGGAGAAAAAATAGAAC
CATTCAAGCCTACTCGAGGTATCCGGCAGGGAGACCCCATCTCCCCCTACTTATTCTTGA
TCGCAGCAGAGGGCCTCTCGTGCCTCCTCAAATCAAGGTCTAAGTCATCTCTGACAGGTA
TATCGGTGCCTCCTACGCCTCCACCCGTTAGCCATCTCTTGTTTGCAGATGATAGCCTGT
TGCTATTCAAGGCTAGTGGGGAGGGATCAACCTTGGTGTCAAACCTACTCGGTACTTACT
GTAATGCTTCTGGACAAAGGATAAACAATGAGAAATCTTCGATTTTCTCCAGCACGGGAT
GTCTGACGCACATGAGAGAAACTGTCAATAACAACTTACAGGTCCATAATGAATCTCTTA
GTGTACGCTATCTTGGCATGCCCAGCGAAGTGGGCCACTCAAAGAATGGAACGTTCAAAT
ATCTGTGTGATCGCGTGTGGGAGAAGATTAAAGGGTGGATGGCGAAGCTACTCTCATCAA
CCGGTAAGGAAGTTCTGATAAAGTCTGTTGCACAAGCCATTTCCATGTTCTCAATGGCAA
GTTTCAGACTGCCCCGGGGTTTATGCAAGAGTATTACATCTATCATTTGACAATTCTGGT
GGGGTTCTAAGAAGGGAAGAAGGAAGCCCAACTGGGAGGTATGGGATTTCGAGACATGGA
GATATTTAACCGCGCTCTTCTAGCAAGGCAGGCCTCGTGAACACTGACGGACAACTCATC
TGTGAGTGACCGAATATTGAAGGCTGTCTACTTCCCAGAGTGCTCTTTGATCCAGGTAAA
GCTGGGGGCTCACCCATCCCAGATATGGCGAGCGATTCTCAATGGTCGGGATATCCTGGC
ACAAGGAATCATACGACAAAGTGGGGACGGACAAACTATGAATATTTGGCATCACAATTG
GATCCCGAGGGATGATACGTCCATTTTGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATACTTTGTGGTACCATACTTATGATTTTTCTCTCTTATTTTGCAA
