| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_45267
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61209 |
2 |
6426 bp |
None |
Available |
Available |
LOC_Os02g50990.4, FRAME:+2, EVALUE:5e-16, 13102.m05793 protein RING-H2 finger protein ATL1Q, putative, expressed |
CDS Structure of MLOC_61209
Contig Sequence (6947 bp)
>contig_45267 6947 assembly3_WGSMorex_rbca.fasta
CGAAGTTATACGAACAGTTCGACAAAGAGGGGTTTTACGGGGCGAAATCTTGCGCTGCAG
AATAAACCCCGTATATGAAAATGTATAATTTAAAAAAAGGCTTTCACGGAAAATATTGCA
ACCACACTCATTCATAGTTCATCACATACTACATGATCATATATACTACTCCCTCTGTAA
ACTAATATAAGAGCGTTTAGATTACTAAAATAGTGTTCTAAATGCTCTTATATTAGTTTG
CGGAGGGAGTACACTACACAAAATTGAGCTCACCGGAGCGCGTGCGGTAATAGATGTGGC
AGCGCTCAGTTGTCATCATCGGAGTAGGAGAGCTCGACGTACATGAGCTCCTACGCAGTG
GCTTAACGGCACCACTCCTCAACCTTGTCGCTGAAGTCGAGGGACAACGGGACACCCTGC
TCGTAGAGCGCTGTGTCGATCTCCTCGTCCCTCCGGTGGCGCTGCCGGTGCTCTTCCGCC
TCCCGCGCACTGCGCGCTAGCAGTGCGGGCATAAGGGTGTCCCCCGCCGCCGGGGGGGGG
GGAGTCCTCCAGTCCGACGATGCCCCAGGCACGTCGCTCCGGTCCCGTCTCGGCCTCCAG
CTCCATCTTCACCGAAGGGAGCTCCTCTAGCTCCCTCTTCACCGGTGGGAGGGAGGAGGG
CGAGCGCAAGCTCGACGCCTCGGAGGAGATGCTGGAGAAGAGGCAGCCGCACGTGTAGTC
GTACTCCTCTGTCTCGCAACGAAGGAGCGACGACGGCGGCGACAGACCCTAGCACGTGTA
CCGCAGGACGGCGCGCTTCCGCGCGGCGTCGGATCTAACGCGAAGCACCTTCTCGGGGTT
GTGGTTGCCTCGGCGACCGGAGTTGGCCATCTTGGGCGGCGGATTAGAGCGGCTAGGCGG
CGGATTGGAGGCGCGTGCGGCGAACCTGAGGCGCCGGCGGTGCGGAGTGGGGATTATTCG
CGACGGCAGAGGGATAGGGTTCGGACCCGTATCCAGTTGCCGAACCACATATATAGTGGT
CGCGGGGTCTAGTTACGGGCCACCGCAAAAAAATTACGGGCCGGGCCTCATTTACGGTGT
CTATTCTAGCAGTTAAAACGGCCCAAACTCGTATAATCGCTGGAGTTTTATGATTCCGAC
GATTATACAAGGTGTGCTAGAGATGCTCTTACCTCTCGTGGGGTAAGATGGATGCCATAG
TCAAAATTATTTTAGACTATAGTCTAAGTTACTATTTTCATGGATAGTAACATAAGCGTG
GTATCATATGCAATCCTTAACTTATTCAGACGTAGACTCATTTTGTTTTGGATGTGTTAT
GTTACAGTAATATATTATGCACAAGCACATCTCTCGTCTTTAACTATTTGATGCATAAAT
AAATTTATCTTGAGATACGTTATGTTACCGCCGGTCTGAACACACATTTTTTCGCAAACC
CGAGAAAGGGGAGGGGGATGGGGGGCTTGGCGGACGGCCGGGTCGATGCCACGCTCGCTT
CTGATGACTATGGCCCATCCAAAAATGGCATCCCCCTTTGTTGCGCTTTCATTTGAAAGC
CCGCGTCGCTTGCAGCGCCATCTTCATGTCTGTCGAGAGCATGCATCTGCTGATATTGAT
GTCACGCGATGTGACCGGATGGGAGGAGGGAACTGAGGGACGTGACCTCTCGGGCGTTGC
CGCTTCTATGCGGGTAACATATCCCGAGAAACCAACTCCGACCGCTACGCCGCATTGCAA
CGGGCTAACCGACCCTTCACCTGGACGTGGCTATTTAAGTTGTGTGTTCGTGATGCAGAC
ATCCGTCCTCCCCATCCCTGAGCCCGTTCCCCAAGCCTTCCTCCTCCTTGAGCCAAGTGG
AGATGCCGAAGTCATGGTTCTACACGCCAGCAGGCGGAGGCGGTGGTAGTTCATCATCAA
GCGGATGTTGGCATCGCCGCCCTTGCTCTCTAGGTCCATCGGCATCCATGGCAGCGGGCT
CCTCCATGAAGGAGGAGAAAGTCATCTCCTTCAGCAACTAGAAGGACCAGGAACCATACT
AGTGGCCCCATCTCCTCGTGGAGGCCGCTCCAAGGGATGGATAATCCGCCGTTAGATGGA
GATCATGACGGAGCACTCGCTCCATCAGATGGGCCCGACGATAGCATCGCCGTTATGCGT
TATGGAGTAGCAACCGTCCCCGCTGTGCGTCCTTGTGAAGCGGGAGCCTGTGTTGCCACT
CCCACGGCTGAAGGAGAAATCCTGCATCCATGCCGCACAACCGCATCCTCCACATCGGAG
CCGTGTCAAGGGATGATCCCGCATTTGCACACTGGATCCGACGCGTCAAGGACGAGTCCA
CATCACCCCAGGTATAAAGCTAGTACGCCCGTGTTGCCGCCATGCCACAACCGTCGCCCC
GTAAAGGAGGAGCTGCCGCCCGTGATCATGAAGGTGCAGGGCCGCATCCTCCATTCCCTC
GGAGGAGGCATTTACGAAGGTCCCTCGGGCTATAGGGCCCTCGTGTCCGACAAGGAGCAC
ACGGTGAGGCAACATGTGTGGTATGATTGACGCAATGTCGCTCACCGTTCCAAATTCATG
AAGTCCAACACGGCGCCAGAATGGGTCCGCAATGACCCGTACCTAGCCGTCGCATGGGCT
ATCGACTGCTCTGTCACCATCGTAGAGAAGGTTGCTCATCGATGCCACCGCCTTGACTAG
CAGCTCGTCGAGATCGACGAGGAGTAGTCATTTAGGAACTCCTCCGCCAACTCCGAAAAG
GGCAAGCTCTATCCACGGAGGCCCTCTCCACCGCATAGGAGGAGTCCAAGCGGATCCTCC
GTGAGCGCCATGCAGTCATCGCAAAAGGGTGTCACGACCTTCCGACGCCCTTTCGCTGTC
CTTCCACCATTGGAGGGAGAACGATAACTACGTTGGCACGAACGGCGAAGGTGGTGCAGC
AGGGCAGGACCACCATGCATACGAGGTGGTTGTGTGGTATATGGTTTAGTATTTTTCTTC
TTGTAGCTTTTAGTTAATCGATCGAAATATCGATCATTTTATGCAAATTATGTTCAAACT
TTGAATATGATCCAACTTGTTTTCTTAAATTTGTTAGGTTATTTTAGGAGACTTTTTTTA
TTTGTGCCCCTAATTCAAAGCCACTACTCAAATTTACCTCTAATTTCGAAGTGTTCTCAA
ATTTGTCCCTTTGCCGTTATGTGCCCTTATAGAAATACCATTTTGTGTTGTTACCATCCA
GTCAAAGGGCTTTGACCGTCTACACGGCGTTTGGTGGACATTTTACCCCTGTCTCTATGT
GGCACTTACGGGTGGGTCCCATTGTCCGGAATTTTTTAATGAAACGACACTCTATCCCCT
CACTTTAACTTACAGATGGGCCCCTCATCCATAGGAAAAAAAGAAAAGGAAAGTAAAAAC
ACATAGCCATAGTGTATGACGAGGGATCCAAGGTGTGAGAAGCATTCCATGCTTTGAGAG
TGAGGTGCCCCGTAGGCTTACGGGGATTCCCGTACTGTCATCATCGCCTTGGTAAGCTAT
TGCCTCACCAACTAGCTAACCAGACGTGAGCCCCTTGTTGAACAGATTTATCCTTTTGCT
CCTTAGCCTATGGGGTATTAGCAACCATTTTCAGTTGTTGTTCCCCTCCCAATGGCAGGT
TCTTATGCATTACTCATCCGTTCTTAGCTGGAAACACCATTTCTTACTCGACTTGCATGT
GTTAAGCATGCTGCCAGCATTCATCATGAGCGAGGATCAAACTCTATTTCTATATATTAG
TATTAGTTAGTAATACTATTTTATTAGTTACCGATCCCGACTTAGTGAGTTATTTATTTC
GTGATGAATTGTCAGCACCAATTCAAGAACAGTTGGATGCTGACAAAATCATCAGAGAGT
GGTATTCTTTATTATGATTCAACAAAGTGAAAATAGCGGATTCAGAATTGTAACCAAGCA
TCCTAGGTTCTATAGCTGATTCAACACTAGAGCATGCAGTCCATCATGAATACATAACTA
TATAAAGTATGCAGTGAGTGATATTTATTGGTAACCGGTCTTTCACTTCTTCCTCTCCAC
TCCCATGCCTTTCTTGGTAGGACCAACCCAACCGGAGATTTCCGTCAAGTCTTTCTACTT
AGTGCAAGAAGCGTAGGGATTAGGCCCACTTGTCATAGGCAATTTATTTTAGATCAACTA
TACCAAAATCTAAGTCAACTAAGAAATATACATAGTTTAATAGTTTAATTAGTTTAATCT
AACTAGCTGGCTACCTGGTCCACCACGTTAATGACCCATGCATTGTTTAAATGGCAACAT
GCTCCCATGACCAATACTACTACCACGACGGACGAAATCTCATCTTCCGTCACCATTTGG
TTGGTGGGGGATAAAGTTCAAATGAGTGGGACAATGCACATTGACTGGCATGTACAGACG
GGGTCGTAATGAGCCGCAATGATGAGTTTGGCGATGCCCAACGACGGTACTCAACGGATC
CGAGCAGGTGGGCACGGATCCAGTGGCTTAGGGGGTTGTGCGTCATCGTAGGGGAACCAT
GAGCACAACAGATAGAATCATTTGTGGTTTAGTGGCGTAGGGGAGACAAATTGATGATGG
TGCTCCGGTGGTGGCAAATGAGGAAGACGGTCGATCCGATCGCGTTGGGGCGGTCCTGCT
CGAGGTAATCCTATGAGGCGACGTAGTCGAGGCGTGAGCATCTCTTGGACAGCTTCTCAC
GGTAATGGGATGATGATGGCCACGGCGAGGGCGAAGGTCGTGATGACGGGAGTTCTCAGA
TGCGGGTGGGGAGGAGAGCGAGTGGGGGAAGAGAGGGAAAGCTAGCTGGGGTTGTCCAGG
GGTCTGACATCGTCGCTAAGTAACCGTCCTCAAGCTAATGTGGTCGCAGCTGACAGACAT
TGGCCAACGATGGCGCGTACCAATGCGTGGGTAGTCGACGAGCTAAGGAAGACGACAATT
GATGAACGTGGGCTAGACCTGGCGTAGTTCACTTGGGCGAGTTGGTTGGGTTGTCCTGGG
CCAAAAGGTAGCATGGTCTCTCTCTCTCTCTTCTTTTCCAATTTCTTTGTCAGTTTTTTT
AGGACAAAAATGTTGGTGGGCCAATCGGCACGTAGCAGCGACGACAACGTTTGGATCTCC
GCAGCGGCGATCGATGATGACTAAGATAGGAGCAGCAATGGCCACCGACAAGTGAAACAA
TTACCGCGGTCTTTCAGCCTCCTTCATCGTCTCTCTCCTCTCCCGCTCATTCCCGTCTTC
CTCCAACATCGTTGTGTCGCGCAGCACTTGTGTTCGCGCCGCCGGGCATATCGTAGTCCA
GCTCTAGCTCGCCATCTATGGTAACAGTGACGGAGACAACCTTTGGCTCCAAGAGGCTTA
AGGATTTGGATATGGAACGGATAGGTTTCTGCAATATAAGGTCAGCTGGTGCAAAGATTC
TTATACTGCGATGGCGACAATGTTATGCAACATGTCCTTTGTTGCAAAGCCTTGTGCAAC
ATGAGCTATGTTGCAAAGATTTGTGAAAATGAGCTTGTTGCAAAGATTTCTATGCAAATT
ATGGATACACGCATGAGATCAAAGGGCTATCGTGCACGTCATCCAAAGGCAGCGGAGGTA
ACTGATCCAATACTATCATCACCCGATGCGTATCACACGCCTCATATTATAGATAGAAAC
TTTTCTGACGAATGGGAAGTCTCTGTCTGGAAAGAAAACCATTAAATATGTTGGTAATAT
TTTTTAAATTTTGTTCTACTTACCCATATTTGAATAGTCAAAAATGTCATTGATAAATCA
AGGGCTAAGATTAAATGTTCTCTTACCACTACTCTTCGGTTTCAAAATACTTGTCGTGGT
TTCAGTTCAACAAGTATTTTGAAACTGAGGGAATAGGATGTAAGAGGGAGCATCTTAAAA
TCTCTTATTATTTTCTAGTAACCTTGTTTTCATTTGTTCTCAATCTCCTAAATCTTAGTA
GTGTGCTTCTTCTTAGTAGTGTGCTTCTTGATATTGTAGGATATGGTAGCCGGTGAGACG
GCGAGAAGACTACCCAATTGCTCCCATGTATTTCATCAGCTCTGCGTGGACAAATGGCTC
AGTGGCCACGGTTCATGCCCTGTGTGTCGGCAACATGTGTAAAGTACACAAGTATACATT
GTTTACGATCGAGTTCTCTGTTCTAGAAGGAGTTAGTTGTGTAAAGTGTCTGCTCCTATA
CAATGTAGAAAGATAGAGGGAGAGAGAGTATACACACACAGCGTTGTAAATTAGATTAAT
CTGTGTATTTTACTCGAAGGCTCCAAGCAAGTGGATATGTACATCTTGTATTTTCCTTTA
CATTAAGCGCAAATGTAAAGTTAAAAAACAGACACGGCTGCCATAGGATGTTTACAAGCC
ATTTTAGAATGTGGTTAATGTTTTTTTTGCGGGGGAGAATGTGGTTAATGCTGATGGATG
TATCTCTGCTGCGTCCTATATGTGTGAATGAAATGGGTTATGTACCTTTTTTTGTGGTAG
AAAAAGATTTATGTACATGTTCTATTAGAAAAATATTCCATATACGGGGGAGCAGATTTT
TTTGAGGAGCAGATTCACTGCCTTTTCTTTCCTTAATCTCCCATAATAATAAAGCGCGCA
GCGCTTCTGTCGCCCATCGTCCGTCATTTTGTAGAAAAGTCCTCGTAGTTTCCGTTAATT
AACCCGAAGTCCAACTTTAAGTCAGAACGAACCGTTTTCTGTCCTTTTATAGAAAAGTCC
TCATTGTTTTAGATAATCAACCCGCGGTCCATCTTTTAGTCGGTGCCGAACAGTTTTTTG
CACTTTACAGAAAACTCCTTGATGTTTCAGGTAATCAACCCGCCGTTCCTATTTATGTCA
GCCGAAATGTTTTTTGTTTTAACAAAAAAACCCTGACTTTTCAGTTA
