morexGenes - Barley RNA-seq Database

Contig contig_45192
Source Contig contig_45192
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_45192 (6758 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_45192

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_61177	3	1152 bp	MLOC_61177.1	Available	Available	LOC_Os12g41290.1, FRAME:-3, EVALUE:3e-175, 13112.m04308 protein Spc97 / Spc98 family protein, putative, expressed
CDS Structure of MLOC_61177

Contig Sequence (6758 bp)

>contig_45192 6758 assembly3_WGSMorex_rbca.fasta
ATAAATATCAACATGAAAGCCTGATAAAAAATGGACGTATCATCCCGCCGGAGATGCTGT
GTGTGCTGGCCGTGAAGGACATGGCGAAGACGGCGTGGGAGACCATCAAGACCATGCGGA
TGGGCAGCGAGCGCGCGCGAGAGGCCAAGCTGCAGGTGCGCCGGCCGGATCTCGAGGATC
TTCGTTTCAAGGACGGGGAGTCCATCGAGGACTTCGGGCTGCGTCTCTCCGCCCTCGTCG
CCGATCTGCAGTTGTACGGCGACCCCGTCACCGAGCACAAGGCGGTCTAGAAGTTCCTCC
GTGTGGTGCCACGGTGGTACCGCCCGATGGCCATGGCGATCGAGTCTCTGATCGATCTGA
TAACCATGTCTGTTGAGGAGCTCGTCGGGCGCCTCTCTGCCTGTGAGGATCATTACGATC
TCGACGACGGCTCACAATCCACCGGGCGCCTTCTGCTCACTCATGAGGAGTGGCTGGCCC
GTGAGAAGATGGGCCGCGGTGCGGCTCGTCGTCTGGTGATGGCGGTGGTGGCAAGAATAA
ATCGCCCGCAAAGCCTAAACCTCAAGGGGGCGACAAGGGCGCGTCGGGGAATGCCATGGC
AGGCGGCTCTGGCGGATCCGGTGGCAAGAAAAAGAAGGGCAAGTGCCATCATTGTGACAT
CCCAGGGCACTGGAAGAAAGAGTGTCGGACATGGCTCCGCGAGCAGGAGCAGAAGGGCAA
GCCGGAATAGGCAAATCTGGCACAAGCCGACGCCGACCATGATCATGGTCTCCATATGGC
CGTAGTCACCATCATCGATGCATCGCAGCTCATGGCGCCCCAAGAGGTATATCTCAACAA
AGAGAAGGTCATGCCCGTGCCCTCGCCAGATGGCGTGTGGTTCTTTGACACCGGGGCCAG
CAGTCATATGACGGGCGACAGGCACATGTTCTCGGTGCTGGACGAGACCGTGCGCGGCAC
TGTGAGATTTGGTTACAGATCGTGATGGCGATACGCGGGCACGACTCTGTGGTTTTCCGC
TGCCAGAGCGGGGACAGCGCGCGCTCACCGGTGTTTTCTTCATTCCATGTCTGCGCACCA
ACATCGTCTCCGTCGGGCAATTGGACGAGGTAGGCTGCATCATCGACATCAGGGACGGCG
TCATTGCGATCCACGACCCGTCACAACACGTCCTGGCGTGCATCAAGCGGACCACCAACA
AACTGTACACTGACACCCTCGTTGTGGACGCATCGGCGTGTCTGATGGTGATCGGGGACG
ACGAGGCATGGTGGTGGCACACATGCATGGGGCATCTCCATTTTCGTGCGCTCCGGGCTG
TGGCGACCAAGGAGATGGTGCAGGGCATGCCCGTGATTGATAGGGTAGAAGAATATTGCG
ACGGTTGTGCACTGGGGAAGCAGCACCGCGCGCCGTTTCCGCAGGCCAGCGCGCACCATG
CAAAGCGTGGCCTAGAGCTCGTTCATACCGATCTCTGCGGCCCTATCGAGCCCACAACGC
CGGGAGGTAACAAATATTTCATGTTGGTTGTTGATGACTTTAGTCGGTACATGTGGCTGG
AGCTTTTGAAATCCAAGGACAAGGCATACTCGCGCTTCAAGAAGATATAGGCCATGGCGG
AGGCCAATGGCGAGTGCAAGCTGCTCGCCTTCAGGTCGAACTACGGCGGCGAGTTCAACT
CCGCTGAGCTCAGAGACTACTGCGAACAGCACGGCATCCAACACTTCACCACCGCGCCTT
ACTCCCCACAGCAGAATGGGTTGGTCGAGAGACACAACCAAACGGTGGTGGAGATGGCAC
GTTGCATGATGAAGAGCATGTCCATGTCGGCGCTGTTCTGGGCTGAGGCCGTGTGGATGG
CAGTTTATCTGCTAAACCGTGCGCTGACGAGGACCCTGGATGGTGTCACCCCTTACGAGG
CGTGGCACGGCCGTAAACCCACGGTGCATCACTTACACACGTTCAGGTGCACGGTTCACG
TGAAGAGCGTCGGGCCTGGCATCACCAAGCCGAGCGATCGCTCGACGCCGATGGTGTTCG
TCGCGTATGAAGAAGGCTCCAAGGCCTATCGTGTCTACGATCCTGCAAGAAAAAAGGTAC
GGGTGACGAGTGATGTGATCTTTGAAGAAAACAGGCCTTGGGTGTGGCGTACTCCGGGCG
CGGCAACTGACGCCCCAGCGTCGGCGACATTCATCGTGGTCTATACCACGGAACACGGCA
TCCACGAGCGGGACACCGGGTTGGACACGACGCCACCAACGCCACGGAGTCCAGTGACCC
CTTCTTCATCGACGTCAGGGACGCCGCTCTCAACTGCGAGAGACACGCCCGCGACGACCA
CGCCTCCGACTAGCACGCCCAGCACTCTTGGCAGATACATCCGCTGGGCCACACCGCTCA
GCCACGACGAAAACCGCCGAGACGTGGACACCGGCAACATCCGCTATCGTCGCGTCTCTT
GCATCATGGATGAGACTGAGGGGGAGGCCGTGCGCGAGGCGATGGAGCAATGCTTGCTGA
TCGCCGAGGAGATAACCAACATTGGAGATGCTCTTGAGGACACCGCATGGAAGAGTGCTA
TGGATGTTGAGATGGATTCAATTGCTGAGAGCGGCACTTGGGAGCTGATCTCACTTCCTC
GAGGGCAGAAGGTGATTGGTCTCAAGTGGGTTTACAAGGTCAAGCGTGATCCTGAAGGCA
GAATCCTCAAGCGCAAGGCTCGGCTGGTCGCAAAGGGCTATGCATAGAGAGAATGTGTGG
ATTTTGAAGAGGTGTTTGCGCCTGTGGCACCATGGAGACAGTGCGCTTGTTCCTTGCTCT
GGCCGCGCACTCCGGGTGGGAAGTGCACCATATGGATGTCAAGTCTGCTTTTCTCAGTGG
AGAGCTGGCCGAAGAGGAGTAGCTGGGAAGGAAGCTCATGTGCTGAAGTTAAGAAAAGCA
CTCTATGGTCTACGGCAGGCCCCGATGGCATGGTATGCTAAAATGGACTACACCCTCGGC
GCACTCGGGTTCAGTAGAAGCCCGCTGGAGCACGCAGTTTACAGGCGCGGGGACGCACGC
TCCTACCTGATTGTGGGCGTGTACGTCGATGATCTCATCATCACAGGCACCGATGCAGGT
CACATACTGGAGTTTAAGGATCAGATGCAGAAGCTCTTCAAGATGACAGACCTCGACCTT
CTCAGTTACTATCTGGGCATTGAAGTAACACAATCCAAGGGAGTGATAACTCTGTGTCAG
CGTGGCTATGCAGAAAAGATCCTGGAGCTATCAGGGATGAGTGGCTGCAATCAAAGTCAC
ACACCCATGGAGTGCAGGCTGAAACTGAAGAAAGAAGATGAAGGGAAGGCTGTTGGTCAA
TCTCTGTACCACAGTGTCATTGGAAGTTTGAGATACCTGGTACACACAAGGCCAGATATC
ACATACGCCGTGGGCATCGTCAGCAGATTCATGGAGAAGCCAACCACAACGCATTGGGCA
GCTGTGAAACAAATTCTCAGATACATTCAGGGCACTTTGAACTATGGCTGCCATTATGTA
CATGGAGGAAGCAGCGCGCTGCTGGGGTATAGCGACAGTGATCATGCAAACGATCAGGGA
GATCGCAAAAGCACATCAGGAAATGTGTTTTTCCTTGGAGAGAATCCCATCTCTTGGACA
TCTCGGAAACAAAAGGTAGTGGCGATCAGCTAGTGTGAGGCTGAAATAATATGTGGCTGC
CGCGGCGGCAACCTGTCAGGGCCTTTGGCTGAGCAGACTGCTTTGTGAGATGAAAGGAGA
AGAGCCAACAAAGTTCAAACTGTTGATCGACAACAAGTCAGCCATCGCAACAAGCACATA
GATGTAAAATATCATTTCATCAGGGAGTGCATTAATTGAGCAAGAACAGGTGGAGGTCGA
TCATGTTCGGACAGACTACCAGCTGGCAGATGTGCTGACCAAGGCACTCGGACGCGTGCG
TTTCGTGGAGATGCGGCAGAAGCTCGGGGTCAGAGAAATCAGCAAGACACTCTGAGCTTA
AGGGGGAGATATGTTGGCATAAGCTCGCGCGTTGCATGGCTGTGTAGGGTAGTTCATTTG
CTTTCTCTGTTATTGTAATATAATGTGTGTGCTGGGGTGATGTGAGTGACCCGCACATGC
ACGTAGATCCTAGAGAGCGCGTTTTTCTCTCTTGGTGGACGATCACGTGTGACTTGGTGT
CGTGGGATGGCGTGGCCATCTCGGATCATAGCGAGTCCATCGGAAGGTAGCTAGCTTCTC
GTTGTAACCAGCGTGTAGAGAGGAAACGGGATAACAGAAAAGCTGCGAAGTTTGAGCGGC
AGGAAAAACTCTCTCTCTCGTATTCCCTCTCGAGTTCGTCTTCTCTCTTCCTCCTCAGAA
TTCGAGTGAAGACTTAGTGTGTACTCCAAGGAAAGAGGATTCCGGAATCCGGACGTATAC
GACAGACAGAAATAGACGTGTGTTGAATGGCTTTCGGAATCCATACGTATGCGGTGGCCT
GGAGACCGTCCGAATATGGATTATTGGCAAGGCAGGCTTGTTCATTTCGTTATTCGTACA
TGCCATAATGGCCTGTAGAACATACATGCTCTGATGATGAGCACCATCACATGAAGCATC
TGCTACCGATGAGTTCTTTCTTCTTTGGTTAATGAGCTCTTGGCCTCTTGGCCAAAATTC
GAGGATTTCTTGTATGTTTCCAAATGTTATCAGGCCAGACAACATTGTTGCAAAGCCAAA
ATGATGGAGGATACTTTTGTTCAGTAATTATTAGTACGATGTGATGTCCGGAAAGCAGCT
CCATTGTTGATTGTGTCCTGAATGCATGCAGTCCATCTGACTAACTTTGAATAACAATGA
TATGGCTATCACTTTTGAGAGCACTTTCCCAATGTATATATATGGAAAATACATTTCAGA
GTTGTATAATGCCTCTGCCTCACGTCTTTGCAAGATATGTTAACTTGCAAAAACGTGTTA
TATTATGTTAATTAGGAGGGGGGGGATGGAATTGGCCCTTAGGGTATATGGGTCCTTGAT
GGATGATCAATCCATTCGAAGAAATTAGCATCGCAACTTTGTCCTGACACAAGAAGACCC
AATCTCTTCAACATACTCACACATACACTGAAACTTGGGAAAAGGAAGTTGCATCCTCAG
AATGCGGTCAAAAGAAGATACATCCTCAGAATTGTGTGGTACTAAAACCCAAGGAATTTA
GGAACTGCTTCGTGCTACCTCGGCCTGGCCATGTCAGGTTTATATACACTCCCCACAAAT
GGAGCTGAAAAGCACCTACAATCCTATCAATGCTGCTGCCGAGCACGGGACCCAGGGATC
GCAGTGAAGCTTCCGGTGTCAGACATGTAATAGTGATTGTAGTTGATCCTCGTGACCAAA
TCCGCGAGATGGGGAAAGTGGCCCACGTTCAGCTTGAAAGATAGGATCTGCAAAGGGATT
TCAGCAGTAAATCTACTGACACATAAATTTTGGACAACATAAGGGATCATCAAATTTTGC
CGAAGTAGGTAGAAGCATACCCTCAAGAGGAACACGACGCACTCGTCGAATTGCTTCTCG
ATCCGATCCAACTCCATCTCGCATCTTGCCCTAACAGATGCCGCGGTCCCTCCGGTGCCG
AGAGTTTGCTCCACATTGTGGAAGTCTAACGCCAATCCCAGTATAGTCTTGACTCGACTG
GCGATCAGAGCCCACTGAAAACACACGGGAAATAAACACTCTTAGCAATAGTTCAGAACT
TCAAGCCTGACATTGATTTTTGTAAGAATAACATGTTCTCACCAACTTATCCGAGGCCAC
AAAGCATTGTCTCTGAATAGAAGAAAGATATGCCTCATGAACTTCCATGACTTCATCTAA
TGTAGTAGCAGATGCCATGCCATCACAAAGCTCAGTCCACGCACTATGATACACCTGCTC
AAAAAGAAACGAGTTCAAATTGAGACAGCCATAGCTTCTTACAATGAAATAAATCGAACC
CGTCTCAACTCACTCGGTCCATGACATATTGATGAAATGCATCGACAAAATGGAGGAGCT
TCTGCCCTACTATTAAGTGTTGTTTAAAATTAGGCGTCGTGCTGCCTCTGCCCTGCCAAA
GGAAAATGGTTGATACATCAGAATGAAGCTCACACATTGGCAAGATAGAGCGGATCCAAT
TATCCAACACCAAACAGTAAACACTATAGTAACTGCACAAAAAAAGTAGCACGAGATGAT
CTGATGGCAGAGTACCTTCCACATCCACTTTCGGGTTTCGTCCAAAACAAACTTTGCACG
CTTGACTTTCAGTAAGAACCCCATGACCTGGTCCAGCAAAATGACCAAAGCCATCATTTA
CATGCAGCCCTGTTAAATACTTGCTGTAAAAATAATTACCTTATTATACTTCTTCAGAGC
CTCTGTATTGGCAATTAGATCAAGAGGCCAAGACACCTGTCACAAAAAGAATGCATGAAA
ACTGTCACACACAGAAAATGATACAGATAATCCCTGTAGTTATTGGGAAATACCTTATAT
GTGAAGTTAAGTACATCAAGCGCATCGATGCGAAAACCCTGTGCACGACCTTTTCTGGAA
GTTGGTGCACTTTCCTCATCATATCGTGTGTCATGCTTTGCTAATGAAACAACCAACGAA
TCTGGAGCGGTTAGGAGCATTTTATCAGCTGAATATCTTATGGATTCCTGCAAGTCAGGG
ACTAATGTAAGAGTAATGATGGACATAGATATCAGTCA