Map Locations of contig_45157 (9374 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_45157

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61146 2 1815 bp AK368859 Available Available None





CDS Structure of MLOC_61146






Contig Sequence (9374 bp)

>contig_45157 9374 assembly3_WGSMorex_rbca.fasta
TCATTTAATGACCTCTAGTCCATGTTTAGTCCTTGGAAAGAAACGGATAGGGACTAGAGA
CTTTTTAGTTGGGACTAAGAAAAGTCCTAGGACTTTTTAAAAAACAGGGCCAAAGTCTTC
TAGCCCCTCCCCCTCCCCCCGCAATATTGCCAAGTCTTTGATGGGACTAGGAATGCATCT
TAGACGTTTTAAATTGGTACCAGATCAATTTGATTATTACATCTATATTTTTTTGATTTT
GAAGTTTAAGGGGTGGTGAAACAACGGTACTGTAATTGTAGTTTCTGAGCTCGAGCTCAC
ATGAGGTTGGGATGAACTGTAAAATAACTTAAAACAGTAATTTAAAGAAAATATTTTGGC
AAAAACATTGATGTTTCTTTCACACGCGTTTAAACTTTTGCTATGAAATCACATTCGTGA
GGTGTGAGAAAAGTGACACTTCGAGGAGAAACATTGATGATTTTTCCATACGCGTGCAAA
TTTTTACGACGACTATGACTCAGCCGCTTGAGGGCACTAATCCTTAGTTACACGTGCACA
ACATGTTCCGACTACCAATGACAAGGTCAATCCGGCTTCGGTAAAGAAGCGGTCACAATG
AGAAATCAACGGCTCGTTCTAGTGATCGATGGTATTGGTGTGTTGGTAGTGTAGGAATCT
TGAGGTGTTTTTTATTATGTTTTTAGATGATTTTGTTTATACCTTTGATGAACTTTTATA
ACAAGTTTAAACCTTTGTACCCTTCTGTTTCATACAACAAGGTTACATGTGTACAAACAG
ACACAAGCTAATAATACCAGCATTGGTACGTTTTGTTGAGGTGACTTGTGAGTGATTGAG
GAACCGAAACGTCTGTGGCTAATAATACCGCCACGCAGTGCCACGTCAACCGATGCATAT
CCTTTACCGCGTGCGTCGACGGTGCACATGTTGGGTGGTGCACGTAAGTACAATACAAAC
TCTCCCTTTTTGCCCGCGTGCGTGCATCAACCACAGCACGTAACACAAACTCGTGTTCGT
TGTACTTAGAAACAAAGCAAAGTGTACAAGCAAAGACATATCTCGGCTTCTAGACCATCA
CCGCATGCACCGTGGCAACAAAGTTACAGAAAAGAAGAAGCTGTGCGTTTGTGCGTGCAT
GCAGGCCTGCGGAACCGATGGGGCAACGAAACCGATGGGCGGGCGCCTCGGCCATCGGAG
GAGATCCGCCAAATTAAGGATCGGATCACGCCGTGACGCGCAAGCAAGTTGATGCATGCA
CGCACGCACGAAGAAGACAAAAGCGAACACGCATCTTTTTTTTTTTACCGTTCCGCTGGC
TATACTTGGCAAGCCAACCGTGAGACGCAAGCCCGGCAAAAAAAAGAAAAAGAAAAAAAA
GAAAGAGAGAATGGAATGGTGCGTGAGAAGCGGTGGCTCGAGACCGATCGGACGGAGTGA
CGAGTGCGAGTTTCTCGCCCGGGGCGCGACGTGAGGAATCGGCAACGTACCGCGGCGCCT
CGCCTCGCCTCGCCCCTACCCACCCCAGGCGCCGCATCACGGTCCCTCCCTTCTCTCTCA
CACACCACCAGCCAGGGCGAACGAACAAATCCTGCGGTCCAGCTCGCAGATTCCCCTCGC
CGTCTATATATGCGCGCACCTTCCAGATCCCCCACCCAGCATCCTCCTCTCCTATCCTTC
TCTCGCCTCGCCTCCCCTCCCCTCCCCTCCCACCGCTACCAGCTTCCTTCCGTCCGTCCG
TCCGTCGCCGCCGATCGGGAGAGGTGGCGTGCGGCGTGTGTTCCCTTGTTAGCGCGCGTG
AGTTTGCATGGGGCTGGACGTCGGCGAGATCGGGATGCCCCTCGACCTGGGCCTCGACCT
CAAGCTATTCGTCGCCAAGACCGCCGGCCGGCTCGCCGCCGCCGCCAAGGAGCCGCCCGC
CGTCGACGCCTGCATCCGCGGCCTCGAGGAGGAGCGCCGCAAGATCGAGGTCTTCCGCCG
CGAGCTGCCCCTCTGCGCCCGCCTCCTCGCCGACGGTCAGCCACCCACCCCTTTCATCCC
AATGGATTTTCGTTTTCCTTCTTCTGTTTGTTTGTTTGTTTGTTTCGATTTTGTCTGACC
CGTGCGGTTGCTTGTGCAGTGATCGAGTTCATGAAGGAGGAGGCGGCCAAGAGGAGCGAG
CGCCGCGACGCCGACGACAACGACAAGCGCAAATGGATGAGCACCGCGCAGCTCTGGGTC
GACAGCCGCGCCGCCGATCCCCTCGTACGTACCACTACATCCTCACCTCTCTCCTTTCTT
TAATTTTTTTTTTCGCTCTGGTTTGATCTTTATTATCTGTATATATATACAAGTTGTTGC
TATACGATACTGTACGATTTAATTGTTTTTCGAATCCTGACCGAAACGAATCCATTTCTT
CGGTTTCAGAAGGAGCAGAAGAAGGAGAGCGCCCTGTCCAAGCCCATGCTGCTCGGCGGC
GCCACCGGCGCGCCCATGGCAGTCAGCTGCGGCGCAATGCCGCCGCCGCCGGCTCCCCAG
TATTTCGGCAGGGATGACAAGATTGTTGGCGCAGAAGGCCTGCCTGCTCTGCCGATGATG
TCTCCCGCTGCGAACAGGCAGTTTTCTCCCCCTGCCGACGACCGCCATCAGGCTTTCGCC
GCAAAATTTGCGGCCGCCATGCCACCTCCACCTTCAGGGCCTGGCTTGCAGGCTCATGAT
CAGCAGTCGAGGAAGACGAGGCGGTGCTGGTCGCCGGAGCTTCACCGGCACTTTGTTGCC
GCCTTGCACCAACTCGGTGGCCCTCAAGGTACTTGAGCGATAAATTAATCAAATGTTTGC
TGTAGGTTCTTGTTGGAACGTTGAAAAATATTGGAGTCCTAACGGAGAATTGTTCCATCA
TGATTGCAGTTGCCACTCCAAAGCAAATCAGGGAGGTGATGAAAGTTGATGGCCTCACCA
ACGATGAAGTGAAAAGCCACCTCCAGGTTAGCAATAGTTTTATCCCTTTATGATTTTTTT
TGTGAACAATTCTCATTTTGAAATGCTGTCAACATACTATCTTGTCTTGAGACTAACTTG
TATCATGTTTGATGTTCAGAAATACCGTCTGCACAACCAGAGGTCCCCTAGCTCTTCCTC
AGCTAGCCATCCGATTATGCTGGTGGGAGATCTCTGGGCTCATCAGGAGCAAAGCAGCTC
GCAGTCCCGGTCCCCTGAAGGCCCCCTTCAGCTCTCTTGTTCAGGGGTGGCCGTCTCGGC
ACTCACCGTCAGCGACAGTTCTGAGGAAGACGACAGGTCGGTAGGCTATAGCCGGAGATG
ATCTGAAGGCTTTTGGGACCGTCAAGAGATTTCCATGAGAGAGAGGTAGAGATAGCTTTG
CGGCATGGATGACAATAACGGCATACACTCCTGATCGATCGAGAGGGTGTGGTGCAGGCC
ATGAATCCAGGGATATTGGGCGTTGATCCAGCGCCCAAAAAATGAACTGATCATGGCCTT
GTTCTTGTGATGTACATGAGGCTTTTTTCGCGAGCGTTTCGGGCAGACCACCAATTTTCG
CCCCGAGAATTACATACATATATATAATGAGATTCGTATATTGTTCGGCTCTTGCTGTAC
TGAGGTTTAATAAAGGTGCTCCAGTTTTTTGGATACTATTAGTTCTTGAGTTGCTTGCAT
ATGAGTGCTCACCGTCAACCTTGTACTGCAATACTAGCAGGTTTGCTGAACTGCATGCCT
TTTTCTGACCAGATGAAAATTGCATATCCATATTCTGAACTTCTGATACTGTGATATGTT
ACTCCTCGATCTGGTGCTGAAATTTCATCAGCACCAGCATCGCAGCAAAAGCAAGGTTCT
CTGAACCAAAGGAGCCCAAGGACAGGATTCCACCATGGTTGCTCTCTTGGTTTTCAACTT
GGCATGGCGATCCGGCCATGCTTTTGTACAACTGGTGCACGCTCACCTAACCCTTTTGGG
GCTCTGCCTGGAAGATGAGTAAATATTTCTAGCTACGACTAAAGTTTCAGCATCCAGACG
GCAGACAAAACTGAAGGACAGAAAGAAGAAACCACCGGCGCGTTCTGGAATCCGGACCAT
GAGCTGGGGCTCCTGCAGTGCACTGATCCCCGATAAGCTGCACGTCGTTTTCCCCTGCAT
GCCCTAATCGCCATTGTTATCGTCCCTGTCGTGGGTCAACAATACATTAATAACTACTGT
TTGCTGTCCGTGCTTATCCACAGCCTAGCTAGTAGTACTAGTAGCATAATGCAGGATTGA
TTCGCACGCCGGCTGCCCGATCCGCCCTGGAGTCTGAACATGTGCCGATAGATGGACTGG
CGCGGTTCGGTGAGGGATTATCCACGCATAATCTATGCGCATCGGCGGCAATTATAAAAC
CAGTTTGGGATTATTCTGGTGCTGGTCGCAAGGGGCCGCGCTTTCCTCATCTTCTCCTCC
TCCTTGGCACGCATGTGGAATATCCTCCTTGCTGTTGCTTGCAGCGTCTCCGTCGTCGTC
TGCTCGTCTCCATCCGTCCTCCTGCGCGTCCCTTTCGGCGCGGGATGGGGTGTTTTTGGC
CCTTGGGGCCGCGATGGGCTTGTTTGGGGCAAGGGAATCGTCGGTTCGGGCGTCGCTGGC
CGGCTGTTGGTGATCCCGTCCTGACCGCGTAGGTGGCCCGGGTCGGGTGAATATCCCGAG
CCGATCCTTCTTCCTTCGGGAAAGGAGAATATCCCCATCATTGTTCTCATTTTATATCTT
TTGCTGCCACCCGGTTTGGTCCGAAGAAAAATGCGGCGGGCTTTGCTTGCTCCCTTTTTT
TAACACTGGCTTTGCTTGCTCTAATGCGGCTGTGAATGACCAAGGGTTTTGTTTAAACGA
AAACTGATGAGGGATATACTCCTTTTTCTCTGTTGCAGTAAAGAATCTAAGACCCTATTT
GAAACCATAATAGATTATGATAATTTGGATTATGAAGATAGATTATATAATCTAATTTAC
AAAAATAATCTAGGTGAACATGTTTGAAGCGAGATTATATAAACTGTAATCCAATTTATT
TACATTGCATAATGACTTGTCTGTCCTCTGTTTATTTTTTAAAAAAAGAAGGTGGCGGTG
GTAGAAATGTAATTATCCTCAACTTTACAAAGATAATAGGTCATTAGCAATACATAATCT
GATTTTATCTGGGTTAGAGTAGATTGTGAGTTTTTAATAATCTGTCCATTAGTTTTCATA
ATCTATAATATAATATGTCCTGTTTGAAAACATAATAGATTATAAAAACTGAATTATATA
ATCTGAGTGGTTCCAAACAGGACCTAAGTACGTACTCCCATTTTACAGCATTTCGAGGCC
TGTCATTCCACGCTCCGCACAGACGGTGACGTCGTCCCTCTCGCGGGCGCATCCGCGCGT
TCTTATCATCTTAATTTTTTCCACATCCACATAACCTCATATCCCGCATCCTATATCTAC
ACATGCAAGATGATAAGCTATTTTACATAATCAAGCAACAGACAATCAAATGCTCATAAA
CCAAATTATACATCGGCCAAAAGATTATCGGAGTTCGTCGCTGGACAAGTTCTAACTTTG
ACAACTAAAAACGATAATAAACATAGGAGGGAGGTGTCTTCATCACTTCCGTGTCGGGCC
TTTGCCCTTCTGTTCGCCAGCGAAGTTGTAGGCATCCGTGGTTGGTGAAGATCTTGGTCG
TCGGTGAGGTGAAGTTGTGGTGGTCATCGTCGGATGAGGAATCAGAGAGGACGATCATCC
CCTTCATCTAGCGAACGACCCTGTCCCGTTGCTTCTTTAACTTGGTGAGCCGAGCCGCCT
CCTTCGTCTACAGCTCGGACTGCTCAATAGCAAGCCGGAGCACCTCCGAGCTCTTGTGTC
GTAAGTAGCAAGCGTCCTTTCTTTTCCGCCGTCATTTTCAACCGATGGTACACCTAAGCA
AAGAGACGCTCGTCCTCGTCGGGGTCCGTCGGTAACGCACGACGAGGACACACAGACCGC
TCTGTCGCGCCCCCTTCCCTTGCCTGCTGACTCTTGCGACGGGCGTCGCGTGCCTTCAAT
TTTGGAGCCTGTATGCGGGTCGCCCACACAAGCACTAGCACCCAACGCTGCCCCGCGTGG
AGCAGTGACCGACAAGTCAAGGGGACGACGCGGGGGGTGAAGCGGACGGTGCTGTCCGGG
CGGAACTGCGCAAGGGCCGGGTGGGGCCAACCCCGGCGCCCGGCTACGCCGGCGCAGGAG
CGGCGACCATGCAGATCTGGAGCTGCCCCCGGTGTCCACCTTGGGCCGCTCCAAGGAAAT
ACGAAGGGCAAGCTCCTTGTTGTAGTTGAGGTCTGAGCCGAAGTTTGACATCTCGCCCGA
TTCGATCGGAGTCCGAGAGGGGAAAGGAGAGGGCAGAGCGAGATAGGAGAGTGAGAATGA
GCTAGGGTTCGACAAAGGGGACAAATTGGTGTTTTTGAGGGAAAGTTGTGGGGTTGATGA
TGGGTCGGGCGTGTCGGGTTCAACGTGGCGGATGCGCCCGGATGTGTAAGGTCGGTGTGA
GGCTCCCGGGTGGGTCAATTTTTTTGACCGGTTAGTGATCGGTCGACCCGTCTGAGAGTT
TGAGACGGGTTTGGGACGCCTGACTGTAGATGCTGTAAGTCTGCTCGTGCACCATGACGA
CATGAGGGACGCATGGGACCTCACCTTTCGAGCACTGCTTCCGTGGTAGCTTGCTCCGAA
GTTCTGCGGGGCGTTATCCCATAGGTGGGGTGGGACGAGGACTCTAAGGTGGCAAGGCCA
ACTTTAATGGGCGGCCCCAAATGAACGATCATTTTGTCTGGATTTTGTACATTTGAGTCG
GACAAAGGGGCGGTTTTCGTCCGTTTTTCTGGATGCGCTGGCAATGCAACCAACGCTACC
GACGCATTTGGTCTGCCATGGCTGGCCGGAGGCCAAATATAAACAACTTTTAGAACTAAA
CATTGCAAATAGTTTTTTAACCAAATAAATAAAAAAATGCAAATAATTTTGCAATCAAAT
AGTATGACAACCGAATAAAAAACACAAAGTTTACAATCCAATCAAAATTGTCTTGAATAC
GTTGAAAGAAAATGAATCATACATTTACTGGTTGTCAATGTGAGTTCATATGTGTCAACG
AAGTCATCTTCTAGTTGCATGTGAGTTTACCTAACACGCATCTCACAATGGAATAGGGTG
AACATTTACACATTGTATGTTCTTGGTGCTCGGTCATAACATTTTCATCTTGATATTCAA
GCCATTGGTCGTACACACTGTGATCACGCTCATCCTTCACGATCATGTTATGCATGACCA
CACAAACATTCATCACCTCTCAAAATTTTTCGATGCTTCATCTTAGTGCAGGGTGTCGAA
CGATAGACCATCGAGACTGAAGCACACCAAAAGCACACTCCATGTCCTTCCAAGCAGTCT
CTTGTGCTTGGGAAAATCACTGTCTCTTTTCTCCTTCTGGATTGTATATTGTCTTCACCA
GAGCTGACCATTTAGGATAAATACCATCAGCTAGGTAGTATCCCTTGTTGTAATGGTGGC
CATTGATCTCAAAGTTGACCTCTAGGCAGTGTCCTTTCGCAAATCTTCTGAACACTAGAG
AACGTTGAAGCACGTTGATATCATTGTGAGAACCAACCATGCCTAAGAAAGAGTGCCATA
TCAAAAGATCTTGTGAAGCCACCTCTTCTAATATGATAGTGCAACCTTTCACATGCCCCC
TGTACTACCCCTGCCAAGCCAATGGACACTTCTTCCACTTTCGATGCATACAATCTATGT
TTCCAAGCATTCTTAGAAAGCCTCTATTTGCATTAATCACTAAGAGTCAAGTTGTAGCTG
TGACATTTGGCTCTCTCAGGTACTCACGGCCAAACGCTTCCACCACGTCCCTACATAACA
TGTATATTCATGTGAGACATGTGTAATCACTCATGCAGACATACTCATTCACAATATCAC
CAGAAATTTCGTATGCAAGCACGCAATGCATTTTTGATAAGAAGAGAAACCAACCTTGTC
AAGGGCATCCTCCCTGAACTCAAAGCAATCACAAAATCCTATAACTCCCCAGTGGCGGAG
CTAGCTAAATTTGTCAATGGGGTCATCTTCATATATTAGATGGATTCAACCATAATTATA
CTTCGATTAGCATCCATTCACTACAGGTTTCACATAAATCCATTGGGGTCAACTGACCCC
AACGCCATAGTGCTAGCTCCGCCCCTGTCACTCCCCGTGGAATACGATTGAACACATGTC
TTGCCATCCGGATGCGGCACAAGAAAAGATGGGGTTTGTAGAGTGGGAACCCATAAAGTA
ATCGACATAGAGCAAGGCATGACCGCTCTAGCTATTGCGGTTCAACATCGGAGCATGAAC
CGAGATTGATCCCCTCAAACTAGGAAATTTCCTAGAAATGTGGTCATTTACGACCAATGC
AGCAACCACGAGCTCTTCTTCATCTAACGACGAATCATCTAATGAAAAAATGAAGTTGTT
TAAAAAATACTCGTCCCCACTATCCATGGCTCGTCCCCACTATCCATGGTACCTGATACG
TCTCAAATGGTACCTGATACGTCTCAAACATATCTACTTTTCCAAACACTTTTCTCTGGT
TTTGGTCTCTAATTTGCATGATTTTCATGAAACTAACCCACGATTGACGTTATTTTCAGT
AGAATTAGCATGATGTCAGTTTTGTGCAGAAATAAAAGTTCTCAGAATTGGACGAAACTT
TGTGAATTATTTTTGGAATATATGAAGAATTATGGAGGGAACAACCACCGGAGGGGGCTG
CCTATGGGCCACAAGCCAATAGGGCGCGCGCACACCCACTAGGCATGCGATGATAGCTTG
TGGGGCCCATGTGGCTCCTCCGACCCTAATTCCAGTCCTATAAATTCACATCTTCACACA
CAAAAAATCAGAGGGAAGATTTCATCGCGTTTTACAAGATGGAGCCGCCGCCACCTCCTG
TTCTTCCTTTGGATGGCTGATCTGGAGTCCATTTGAGGCTCCGGAGAGGGAGATTCGTCG
TCGCCATCATAACCAACCCTTCTCTAACAATAATTCCATGATGCTCACCATTGTGAGTGA
GTAATTCCTTTGTAGGCTTGTTGTATGGTGATGGGTTTTGTATGAGATTGATCATGTAAT
CGAGTTAATTTGATAGGGCTTGATTCCCAGTATCCATTATGTTTTGAGATTGATNNNNNN
NTGACTTTGCTATGCTTAATGATTGTTAGTTGTCACTAAGGCCCGAGTGCCATGATTCCA
GATCTGAACCTATTTTGTTTTCTCTGAATATGAAAGTGTTTAGATCCTATCTTGCAAGTT
GTGTGCACCTATTA