Contig Data
morexGenes
Links



Map Locations of contig_45137 (6892 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45137

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61131 1 767 bp MLOC_61131.1 Available Available LOC_Os09g27930.1, FRAME:-2, EVALUE:4e-70, 13109.m02743 protein ubiquitin fusion protein, putative, expressed





CDS Structure of MLOC_61131






Contig Sequence (6892 bp)

>contig_45137 6892 assembly3_WGSMorex_rbca.fasta
GCCGGGCCTTTAGTCCCGGCCCAGAGGCAGGTCGGGACTAAAGGGTCCCGGCCAAAGGCC
CGTTTTCCATTAGTGAAAGAAAGAAGGGAGCTCCCTCCTATTGAACGGCAATCTGCGTCC
AATAGCTGGAGCTTGGCACAGAGCAGCCAACTAGCTGGAGCTTGGCACAGACCCGGGTTA
CTACAACTTGGGATCGAGGGCTTCAGATGAGGAGCAATACATTGCAACTCGGCTCACTAG
CTAGGCCTTTATCTGAAGAAAGTGCTCGTGTAGTCGTGTGGAGTCCTTGGGATTCTCCAA
CCTCGTGCACATGTCAAAAGCGGTTCCATGGCCTTTCCTGAGATACTAGTGCTGAACATT
CGTCCTTGCACTTCGGCACTCGATCGGCAGCACAAAAATCCTTCTCGGCCTGTGGCTGGG
TACTTTCTTTACGGAGGGAGTAGAAGGCTACAGCGATGGACCTCTGAATCAGGTGCCAGA
AACTAGCTAGTTTTTCCACATTTACATTCAGGTGTCCATGCTTCGTATGTCTTGTAACTG
TGCAGTTTTCTAAGTAGTTCTGAAGTTCTCTCGCTGGACAGCAGGGGGCTGCACCTGCAA
CCATGGACAGCTCTCGGAGTATGTTCCTTGGCGGGATGAAATGTGGGGATTTCAACCATA
AGCAGGAAGCTACTGTATGATCAACACAGGGCTGCCGGCAGCATGGGGCAACAAGCATGG
ATTCAGTGAAGGTGACAAAGCTAATGTGATTTCAGCGCTGCAACTCTATTTTGCATGCAG
ATGGCATTCGGTATCCTAACAAAATTTCGTGTATGATTCCACTGTTTTCAGATGTATGAG
CAAATGCAGAGTCAGATATTATTATTTGAACGACAAAAGCTTGTGTTTCCAGGTAATTAG
AAGCAAATGATGGCCCGAAAAACTTGATTCAACCATACTACTACATGACAGAAATGTAAG
AAGCACTACTTCACTTCAATCATCCATTCAAATCATCCATTCAAGCTAGTAGACCTCAAT
TACTTGAATTCATCATTCATGCAAGAGCAGATTGCGCATTACTACAACAGAAACAATACA
TGAGCAACTAGGTAGGCGTTCTAGATAGATTCCAGAAGCAACATTTAACTAGGATGAAAC
TTCATATCCAAGAAACTAAGACTCAAACCAAACTTTGAACTCCCAGTTAATCCAGCTATG
GCATGTCTCTCTTAGGGTCAAGTTTCCAATGCTTCAGTCGTGGTAGCGCAGCTTCTCCTT
GGCCCTGATGTCATTGGTGTGGCCACACTTCTTCTTGCGGCAGTTGGTAGACCTGAGGGG
CAGGCGTGCATAGCACCTGCAACGCAAAATCATGGATAACGCAGAGTAAGGCATCATCTA
ATAATTGATTACAAGTATGCTAATTGATAAGCTAGTTTGCTGGACAAGTTAGGATATACT
CTTCTGCTTGGCAAAAACAACCTAGTTTCCTTGATCAAAAGCACACAGATATGATCTACA
TATGTATCAATCTCCATCAAACAGACCACAAAAGAAACATTTCAGTTCACAAGCTTGTGT
CATGCATAAACATCTAGATACAAATTAACATGTAAACAACTGCATATTGATGAATCATGA
AAGAAATAGTCCATCAACACCTCAACTAGTACTTGATGAAAAATAAGCTAATAAGCTAAT
TCCCTGGATCCAATAAACAACAGAGACATGATCTACATATGCATCGATCCCCATCAAACA
CACCACAACAAAAACATCACAATTCCCAAGCTTCTGTCATGCATAGACATCCATATATAG
ACATGCATGTGAAAGCACCATAAATGGATGAATCGTGAAAGAAATAGTCCATCTACGCCT
CAACTAGTACTTGATCAAAAGTGTGCTAATAAGCTAGCTAGTTCCTCGATCCAAACCAGA
CAGAGATATATGCATGATCTACATATGCATCAATCTCCATCAAACAAACCACAAAAGAAA
CATTTCAATTCGCAAGCTTGTGTCATACATAAAGATCTAGATACAAATTAACATGTAAGC
AACTGCATATCGATGAATCGTGAAAGAAATAGTCCATCAACACCTCAACTAGTACTTGAT
GAAAGTAAGCTAATAAGCTAATTCCCTGGATCCAACAAACAACAGAGATATGACCTGCAT
ATGCATCTATCCCCATCAAACAGGCCATGTAAAAGAAACATCACAATTCACAAGCTTGTA
TCACGCATATAATTCCATATACAAGCATGCATGTGACAGCAGAATATCTGCATATATCAA
TGAATCATGAAAGAAATAGTCCATCTTGACCTCAACTAGTACTTGATAAAAAGCTTGCTA
ATAAGCTAGTTCCCTCGGTCCAAACTCCAAACCACACAGATATATGATCTACATATGCAT
CTATCCCCATCAAACAGACCACAACGACAGAAACACCACAATTCCCAAGCTTCTAACATG
CATAGACATGGCATTAATATACAAGCATGCATGGAACAGCAGCATATATCGATGAATCGT
TAAAGAAATAGTCCATCTACACCTCAACTAGCATACTTTGATAAAAAAAAAGCATGCTGA
TAAGTTAACTTCCTGGATCCACATCCACCACAGAGATATGATCTACATGTGCATCGATCC
CAATTGAGCATAGCATAAGAGAAACATCGCAATTCACGAGGTTCTATCGTTCATAGGCAT
CCAGATTCCAGACCAAGGCAAAGCGATGTAGTACTATAAGTGAAAGAAAAAGGTCCAAGG
AACAGTCCATACTTGCGGCACACAAGCCTGTGCTGCCTGTACTTGAGCGCGAGCTCGAGC
AGGTTCGGCTCCATCTTGGGCGGGTAGCAGGAGCCCTTGTCCCCGCCGGCGAGGCCCAGC
ACGAGGTGAAGCGTGGACTCCTTCTGGACGTTGTAGTCGGCCAGGGTGCGGTCGTCGCCG
AGCTGCTTCCCCGCGAACATGAGGCGCTGCTGGTCCGGCAGGATACCTGCCATCATCGAA
GCCAGACAGCGTCCACGGTTAGTCTCGCACCACAAGACGCTCACAGATTTAGGATAAATC
GGCCCCTTTTTCCAACCGCGGTTGCCTAGCAAATCAAACCGTGTGTAGATCAAGAAGGCA
CAGGAAGGCGGGCATTTCGAGCAACGGCGCATCACGTGGATGGGAGGAAAGGCGGGACCG
ACGCCGGTGGAGGCGACCGGAGGCCGTCACGGGCGGAGGCGGAGGCGCGTACCTTCCTTG
TCGTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGTCTCCACCTCCAGCGTGACG
GTCTTCCCCGTGAGCGTCTTCACGAAGATCTGCATCCTTGCCGCCGGTTGGAGGTTGCTC
GCCTCGCTCCCGCCTCTCCTCTCCCCTCGCCGGATGGTGGTGGTGGTGGTGGTGGTGGTG
GTGGTGGTGGTGGACTGGTGAGAATGGAAGCGCCGCGGACGTGGGTGCGGTTTTATAGTG
AGCGGCCGAGTGGGAGGAGGAAACGGAGCCGTCAAGGAACCGCCCAAGCCCTAGCCAAGT
GACCGCGAAGCCCGGGCCTCGGTCGGAGGAGCTGCGTGATCACTCTCTGCAGACGTGGCC
CATTGGAGGCCCAAGTCGATCTAAGCCCGTTTTCATTTATGTTTTGTTCCAAACCCGAGC
AACTCAAGTCTTAAAAGCAAAGTCTTCCAACTCTTGTTGAAATTATTTCGCGTCTATGCA
TTCCAACCATGGCTCCTTTTTCGATAAAAAGCATATATTAATATCAAGAAGATATTAATT
ACATCCAACCTACGCAACAATACAATGTCCTAATAGCATGATGAATGCATACATCCAAAA
AAGAAAAGGATTTAACTACGTAGCGGCGCCGCATTCTCGGCTTGCCGTGCGGCGGCTACT
AATCAAATCACTTGCTTTTACTGCGAGCTCATAGAATATAAAAAGAAGCTGCATGCAGTG
GCAGACTACCGCAGAGGTACCACACAGGTATGCATACACTAAAATGTCAAGGGACCGACA
GTAAACTAGTGTCATGTGCTTCACTACAAATGAATAGAGTCCTCAAATCTATCCTTGAAT
GTTGCGTGCAAGTTTTAAATGACCAGAATTCAAAAACTTTTATCTTTTAAACCATTAATT
CAATCGATGATCCGTTTTTACCGTTGACTTTGTTTCGACGAAATCTTCAAAACTAGATCT
CATGTCGACATGTTTCGACAACTTTTTTTTCTCTCGTACTTACCACATTTGTTGTACTTA
CTTGTCATATTAGTAAGTATTTACTTGTTTGATAAAAAATAACTTAATCACCAAAATTTT
GAAAATTACATATAAATATGACATCTCGACATAATCAAAATGGCAAGCACAAACAACCCT
TTTTAGGCGATTACGCACAAAAATGTGACAACTCAACAAAACCGGTAACCACAAAAAAAT
CTTTTTTGGTCTTTGTTTGTAAATATGACAACTCGACATAGTTAAATTTACAAGCACATA
AAATAGTTTTCTGACAAAGTTGTATATAAATATGACAAGTTGACATATTTAAATTGGCAA
ACACAACCTATGACATGCTTTTATATCATGTATAATGAAAACTCCTACAAGGCTTTATAC
GAAACAACATTAAAAAGTGCCAATTGAGATATTTTTTCAGGCAAGTAAGTGGTTAATAAT
ATGGCAAGTAGATCAAAAAAATGTGACAAGTATGAACGGAAAAAATAGTTGACGGAACAT
GTCAACATGGGATCTAATTTCGAAGAACTCGTCGCGAGAAAGTCAATGATGAAAGCGATC
ATCGATTGAATTAACAATTTTTTTGATAAAACTTTTTAAATTTCAAACATCAAAGGGATC
GCAACCCGCCGCACCGTAGCGTGATAGTGCTTTGTATCCGGACCGCATGATAGCATTGTA
CACGCAGAACAATGCCGCCGCATGGGAAGAACGCGGTGCACACGCCACCACTAATAATAA
GCCATTACTAGTCCTCCAATCCCAGCTTCCATGATAGTCTTCGCCTCTGACTTCACCATG
GACCTAACCATATCTCTTGATCGCAACAGATAGCAGAGCTTCGTGCTGCTCGCTCCTTAA
CTGAGAACCAATGGGCACGACTGAATCCCGGCCGATCCAGCAATCTCCAGGCATAACACA
CCCATGAGAGTTCATCGACGGTGCCTTCCGGAACCCGCCATGCCGGCCATATCAGGAAGG
GCATGCATCAGGCAGATCTTCGTCTTGTTGCAAGAGGAACCCTATGAACGCCACCTTTAT
CCAAGCACACCAACATACTCCCACACCGTTAGTTGGAGCAGCATTGGAGAAGTCCGCCAC
AACGCACAACCACAAACCATCCATGGCAGGGGGAAACCCAGATCGAGCCCTTAGGCCCAG
ATCTGACCCACCATCGTGCCGCCGGAGATTAGTGATGACACTGCGCACTGCCCGTGGCTT
CAGGCCACGGCTAGAGGCCGCGCCACCCATGAAACGTTGCCACCACTCCATAACCGCTCA
TGGAGTCGCAGCCATGGAGCACTCTCCTCCCCGCCGTCTTTAAACGAGAAGGGGCGCTGC
CACCGCCGTCGGCATCAACGGTGGTGGCGGCCAGGGGCACGCTGGTGAAGGGGGTTGGAC
TGGACGGGGAGGATCCTCTCGAGTGGGCCAGGCAGAGGCGACCCGGGAGGCGGCTCCAAA
CACGGCTCCTACATCCCCAGTATCCTATTTTGTTGTTGAAAATTTTGCTAAGTAGAATAA
CCCAAAAAAAATGATAATCAGTGGCACATAAAAAATTATAACTCACAAATGGTGTCATAG
TTTTGTGAAAAATAGGGTAACTTGCGATAAAATTTCTTAAATCTGGCAATATGTGTCAGA
AGAGTGAAAAAAAAACTCTTTATATGCACAAAGTTGAAGGTAACGTTGATGACTTCCAAT
ATTTTTTGAACTATTTGAACGTCAATTGGTTCACTATTCAAAGTATCTTGGTGGCTTGAA
TATTTCCAAAAGAAAACTCTTACAGTAGCACGTATCTCCGCCTGGCTGCAACCGCTAGTC
CCCTGCGGACCCTATAATCGCCTTTTGAGCCTCATCGCACTGTTGTCACCTCCGGCTACT
AAGCAGGGCTCATAGATGTCGTCGGCACACCGCACACTGGCCACTGCCACCTCCACAGAC
TCCACGCTGCTCCAATGGAGACCTCCCCTAAAAGTATCTCTAGCAGACCCCGTATAATTA
CGATCTATAAAATCGTTTTATAGTTCGACAAAGTAGGTTTTCGTGGGGTGAAATATTGCG
CTATAAAACAGACCCCGTATAATCAAACTGCATAATTTAAAAAAAGACATTCGCGGGCGA
AATTGGAATCGCAGTCATTCAGAGCTCACTACATAATAGACGATTATACGAACTGCATTC
AGAGTGCATCACTTACTACAGGGTGCATAGATAAGCTAACCTAGTGGAGCTCATCGGAGC
ACAGCGGAGCTACTAGCTATCCTACCGTAGTACGCAAAATTGAGCTCACCGGAGTCGAGC
TCGTGCGGTAGTAGATGCGGAGTGCGCTCAGTCGCCGTCCTCGTCGGAGGAGAGCTCGAT
GTAGATGCGCTCCTGCGCAGTCGCTTTGTGGCGCCACTCCTCCACCTTGTGTCCAAAGGC
GAGGGTCGACGCGACACCCAGCTCGTAGAGCACGGTGTCGATCTCCTCTTCCCTCCGGCG
GCGCTTCTGGTCCTCCTCCGCCTCCCGCGCACTCCGCGCCTGCAATGCGGGCAAAAAGCT
ATCGGCCTCCGCCGGGGGGAGGAAATCCTCCGGTCCAACGATGCCCCGGGCACGTCACGC
CGGCACCGCTTCGGCCTCCGGCTCCGTCTTCACCGGCGGGAGCTCCTCGAGC