Map Locations of contig_45094 (7709 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45094

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61085 1 2052 bp AK365478 Available Available None





CDS Structure of MLOC_61085






Contig Sequence (7709 bp)

>contig_45094 7709 assembly3_WGSMorex_rbca.fasta
AAGAAAAAGTGTGTGTGTGTGTTGATTCCACTCAAACCTTTCTGACGCGGACCCTCTCTT
AATAGTACGGCTTTCCTANNNNNCAAAACCACCAAAGAGAACTGTAGAAGCCATCGTGTT
TCAAAGAGACTGAGGGGCGTCGAATCGTCTTGTGCCTTGCCATGTATTATTTGAAATGCT
CAATGCACACGATTAATCCACAGAGGTACTGTCATCAATCACCAAAATCACTTAGAAAGA
AATATGTCCTAACAACGCGTCGCTCTACTCTAGCACATCATGCACCACCACCTCAAGCCG
CTCCTAAACACACACACCCAACGCAGCTAGGACGCGACAAGATGTGGCTCGCCTCGCCTA
AGGCCAGGCAAAGCCCCTGTATGGGGCTCGCCCCCACACAGATGGCCCGTCAAGGAGCCC
ACGCTGGAGCCATCTATGCCCGCCATCACCCCGGAACGGGCCAGATCTGGCTATCCCGTC
CGCATCCTCCGTCACGCGCTCACGAAAGGAGATGCATCCACTATCCCCAACAGCCCACCT
CCTCGCAATTGTAACCAACCCAAGAGCCGACCATCAGAGAAAGGAGTTTCTTTTGAACAA
CCGAAATTCCATTACCCAACCAAATTTGAACCGTCCAAAACTCGGAAGTGATCATTCAAA
GTCAACAAAATAATTGACGTTTAAAAGACGAAGCAAACCAAAATGACTACGCTTTCCGCT
TTCTCTACGATTACTTCAGCTAGTTGCAACTTTCCTTGTAAAATACCATCCACTCCCACT
TTCTCATGCACACGGCAACCAAGTTAATGTGCGCTTCAAGTTTCATCAAAGTAAAGAAGT
ACCAAGAGAAAATAATTACACAGGCTACAGAACCCGAATACTACAGTAGTTAACAATGTA
CACCAGCACGTGCAGTCCAGCACGGTTTATTGCCCCATCTTTATTCATACACAAAAGTAG
ATACAACCAGCGTGTTCGAGCATCTTGGCCTAGGATGCTCTTGCTAACAGTTCTGGGAAG
TGGAACCAAAAAAGAGCTCAAGTGCTTTGGTTCAACAATACAGGAGGTGATATTACACGA
GACAATATTACAAAAGACGCCATGACCAAGAAATCTACAAATAACTTATGCTCGCTGACT
CGAAAAGAATGGGATCTGACTATATAATAATAACTACAGCAAAAAGGCCAGAAGTTTGAA
CTGCTCAATTTATTCAAGCTGCACTTGAGAAAACATTGGATCTCCCAACAAAGATGAGAT
CGATCAGTGGGCAGCATCTCTGCTGTAGAACGCATCCAAAGTCTTCGCGGGGATACGGTG
GAGCAGCTCGCGAGGGAAGATGCGAAGCAATGTCCATGCTAGGTCAAGTGACTGGAAGAT
GTTCCGAGTATCGTATGCTCCCTGTGCTACGAATTTCCTCTCAAATTTGTCCAGGAATTC
TAGATAAAGCTGTGCACAAGAGAAACAACAATAAGTTTGATTTTTGACTTCTTGAAAGAC
CGTATGTCCATGCGTTAGTTCGCTAATGAGCAGTAGCATACCAGATCTTCAGAAGAGAGA
GCCTCCTCTCCCACAACTGCTTTCATGGCCTGGACATCCTTTCCAATAGCATAGTTGGCA
TAAAGCTGAAAAGAAAGCAGTATGTGTGATCCCTTTGTATGTTACAATTGGCTAGAAGGA
AACCAAATATACAGTGTTCAAGCCAGTACCTGATTAGACACATCTGAATGGTCTCGACGG
GTCATACCCTCACCAATAGCACTCTGCAAGAGTTATTGACAGTTCTTAGAACTAAATTTC
AGGATGAAATCCTGATAGCATCTTACAGCAATGGACCCAGTTTTGTAAAGCTCAATTGGT
AAGCGGTCTCACCTTCATCAATCGAGAGAGAGATGGAAGGACGTTGATGGGTGGGTATAT
CTGAAACAATACCATGACAACATGTAAACATTGAGAAAAATATTAAGAAAAGAAAAGAAA
ATAAACTACTGCAGGTTCTAAAAGAAAGTAAAAAGTTACTATATGAAGCTGTGTTCTATC
TTTGTTGATAAAGAGCTGTATTCCAGAAGTTAAAGAACAAGTAAAAGTACCTGTCTGTTA
TGGAGCTGTCTATCAATGTATATCTGTCCTTCAGTAATGTACCCCGTAAGATCAGGAGTT
GGATGTGTGATGTCTGTTTGGAGGGAAAAGAACACTCCATGGTCATTTGCACTTTTATGT
AAAATGGAATGTGCAGTAATGATTGGCCTAAATGCAATTGCAGTTGATGTTGGTCCACCA
AACATCAGTGTTAAGATACTCATGCTAGACTGGCGCACATGCTAGATTATGTCACACTCA
GGACTCAGCAAAATGGTCAAACACTGGTAGACAATATGATGATTTTAATCTATTGCATGT
CAAGTTTATGGCATGTTCAGAACATAATTGATGTTGCTATATAACTGTAAGGAATACAGC
GCAAGCAATTCGCTACTTACCATCATTAGGCATAGTCAGAATGGGTATTTGGGTAATGGA
GCCCGTTCTTCCTTCAATACGCCCGGCACGCTCATAAATGGTTGCCAGATCAGTATACAT
ATATCCAGGATAACCACGCCTACCTGGCACCTCTTCTCGGGCTGCTGATACCTACACATA
AGCAGAAGTGGGTTACTGACTTGTTATGGCAGCAAGTGCAAATTTATCACAGTTGAGCAT
AAAAGTTACTACTACATATACTCCGAAATGCAATACTACCAAGGTGGAAATCTTCCAACT
TGCTGTATAGAGAAAATTACAAAACACTGTTAGAAGCTAATAAAAATGTCAAGGTTCTGT
TCTCAACACTAACACTATATGACCGTTTGGCAGTTGTGTGATGATCAAACAAAAACAAGA
TAACTTCAACACCAGATCACGATCAAACTCTGCCACTTCAGTTTGTACTGCATTTTGTAC
GAGATAATTTCAAGTTTTAGTTCATCCAGAGAGTAATTTTTGCAATTAGATGGATGACAT
TTTAGTGTGCAACAAGGTTATACAATTTTATCAACCCTTTCCTTAAAAAATCATTAATTA
TTCAGGTCACTGGCAAAACATCAGGCCAAGAAGTACTCCAAGGAAGAGCTAACTTGATTT
GAAAATACGCTTCAATGGAATCATGTTCTAGTTGATGAAATATCAAGGATAATACCTCAC
GAAGTGCATCTGCATATGAACTCATATCTGTCAAGATGACAAGAACGTGCTTCCCACATT
CATATGCCAAATATTCTGCTGTTGTTAGCGCAATACGAGGGGTGATAATACGTTCGATCG
TGGGATCATTTGCCTAAAAGACAAACAGGAGCATAGTGTTAAATTAAATTTTGTTTGGTA
TTGACCAAGTCAAATCTTGTTTAGTAGATAACTAAAGCATTATCAAATATAAATTCTAGC
AATATAAGCAGTAATAATTTTTGTCTTGCAGTAGAAAAAAGTCTGGTTAACAAGTAGAAT
GTAAATACCAAGTTCAGGAAAAGGGTGACCCTCTCCATTGAACCATTCTCTTCAAAATCA
CGTTTGAAGAATTGGGCTGTCTCCATGTTCACTCCCATAGCAGCAAACACAATAGCAAAA
TTGTCATCTTCACCACCACCCTGGTACATCAAAGAAATCAGATCAATCAACAACCGATGA
TTTGGCCACGGTTTAAAAATAGTCTCTTTCAAAGAGATGGTTACCTCTGCATGCTTTCCT
TTCTCCAGCCTCTTGACAAGACCAGCCTGACGACAAATCTGAGCAGCAATTTCATTATGA
GGAAGACCAGCAGCAGAAAAGAGAGGAATCTTTTGCCCTCGAGCAATGGAGTTCATGACA
TCAATTGTAGATATCCCTGTTTGAATCATCTCCTCTGGGTAGGTTCTCTCACTTGGGTTA
ATAGAACTTCCTGAAATAAGTAACAATAGATAACTATCAGAAGCAAAAAATGATTACAGT
TTAACACCATTCGTAGTTCTAATTTTGTCCTACAAAGAACAATGAACATACAATTAACCA
TGAGGTTCTTAATTAACAGTGTCCTTCAACTGAGAAAGCACATACCGGAGATATCCAAGT
AGGCCTCAGGCAATATCGGAGGGCCATTATCAATAGGTTTTCCAGAGCCGTTAAAAATAC
GTCCAAGCATATCAAGCGATACAGGAGTTTTCAGGACCTGTCACGGAAGCAGCATATCAT
AAGTAAGCAACAAAAAGTGCTTGTCATATTTATATACAAACAAGAAGACAGACAATGTTA
TTTCAAATTTCATTCTCATAGTTCAGCACGGGCTTGTCCATGTTATTCAGTTCCAGTGGC
ATGCAGTTGTGATGCCTCCTTAATCAACAATAAGCATGACTTGACAATTTCAAGAATGAA
TGTCTTCATCATCAGTTCATCATATTAACAGCGGCCAACCGAAAGCTTCTTCTTAGAGAG
CATTTAATAAACAGTAAGAAGACAAGAAGAAAGTTGTGGATAATGGGCATTTACCTCGCC
TGTGAACTGAACAGTTGTGTATTTGTTGTCTATTCCTGAAGTGCCTTCGAAGACCTGTAT
AATCAATCAAGCCGTTAAGATAAACATACATAACGGCAGTCTAAAATTTACTCGAAAATG
AAATTAAACCAACCATATTACTAAATCAAATTAGAACATAAAATGGTATTGCTTCAGAAA
GAGACTAAACAGAACATTTTTCTCGCCAAAATAATGCAGAAGAGAATATTAATTATAACC
TGCACAACAGCCTTTTCACCATCAACTTCCAGAACTTGACCACGCCGAGTGGTGCCATCT
CCCAATCGGATGTTTACAATCTCCTGGTATTTTGGGCCCTATAGACCATAATGACAATAA
TGAAATAGTAAGAAAAAGGAACTACTAGAATAATCTGGTAAAAAATATGGGAATATGCTA
ACAGATGCACAAATTAGAAAAGCGTACACACCTTTACTTTGTCCAAGATAACCAGAGGTC
CTGCCACACCAGAAACTGTCCTGTACTCTGCATAAGTAAATGTTTAGTAAGCACCATTCT
TTGTTCGGTCATCTGAAAAATAGCAGCAGTACTAGTATGTGCGCTTTGACCTATGTGCCG
TTGACAACAATGACTGGTACTCAGAGCAATGCACTTTTTGCTATGAATGAAGTTCCCAAA
AAGGTTAACATTAGAAGAAGAAAAATGAACGGCTGGCTAAAAGAAATGGCATAGTGCAAG
ACCTGAAGAAACATGATGTTCCATAGTTGAAAATAAACTGCAAAGCTACAAAAAGCAAAC
TTCGTCTACAATTTGATTAGGTCCCTCTCTACTGGAACACTATGGATTTCCAGCAAAAGC
TATGTGGCTGTGTTATACTATTATATCAAATGGTCCCTTCTCTTGTAGCCTAAGATCATT
TACATATATGGTAGTCAGCACCTCAAACCTCCTATCCTATCCAAAGCTGGAGCGACAATG
CAAGTGCTGTGCTGACGGGCTGCAGTGGCGGTTACCCGAGGTAAACAGGCAATGGCGCAA
CACAACCACTGCTGGGCACACAAAACTACAGCATAGGGAGACAGTAAACGAGATGTCTTG
GACGACTCACCCATGCCGATCTCCAGGGTTCCCTCCTCCATGTCGGCGCCCTCCTTCACC
AGACCCATGCTGAACCCAACGAAGCGCAACCTGCGGGGAGAGCATCACGAACCGCGCCAT
CAGAATCAACAGACAAACCGATCCGCGTTTCTCCAAACAACGCGGACCACCCCTAATCCC
ACCGACAAAACAGCAAGCTGTCTGCCAATCGCGCCCGCCGCTCCAAATTCAGGCGCGACA
GCCGGAGCGCGGGGCCTCCGCCCGACCCCTGGGCCCAGATCTAGGCATTGGGGGCAGATC
TCGATCCCGATCTCGGATTCGACACCCGTAACAGCGTGGCGGGACGAACCTAGCCGGTCT
CCCCGCGCGCGGTGGGGGGCGATTGGCTGCCCGCGGCGAGCGAGCTTCGGCACGGGGCCG
GGGGTGGAAGGTTGGAGAGCTGGGGAGGGGACGTACCTCGGGTTGGGGTCGGTGGGAGAC
GGCGAGGAGAGGGAGGTGGAGGTGGAGGTGGAGGTGGTGCTGGTGGATCGTGTGGGCGAC
GACGCAGCTGGGAGAAGAAGAGGAGGGCAGGGCAGACGAGAAATTAATGCAGGGAAACCC
AATCGTTGAGGGAGGGGATACCGCTTTTGCGTGTCGGACCCTGCAGGAATACCGAATTTT
CAAATAGGCCCCGTGGAAGGATCAGTGACGAATCAGCCCACGTCTAAAATTTTAGAGCAT
GTCAAACAGGGGTGGAACGCGCGGCGCACAAAAAAAAGGTTTACAACATACAGACAGCAA
ATTTTAGCGCGTTGATGAGTGTTGGCTCTAGCGGCTGCAGCAAATTTTGACGTGCGCGGC
ACTCCAACAGACGAGCAAAACTTCAAAGCTTGCAACAATGCATTTGTGATCAAACATAGA
CAATTCAAACGATACATATCATAGTTTTAAAATAATACATAGGTTTAAACAATACATAGC
ATACATAGATATAAAATGATAAAAAAAGATTAAAAAAAAGATACATAGCATAGCATAGAT
AGATAGAAGACTACTCGTCGTCGTCTTCATCCGACGCGCCGGTGTCAGATTCCTCCGTCG
TGATGAAGGCGTCAGCCCAGCGTTTATCGTCGGATGACCAAGTCGATGCTTCCTTGAGCT
CCATATAGAAGAGTGCGGCTTGCTTCCGCATACGCCTGCCTTCATGATAGGCGGCTTGCT
CCGTCCTCCTTTGCGCGAAGAATTCGCGCTCGTCGACGACGTCTTACGGGAACTAGGACG
TCTTACGGGAACCGTCGACGCCACTCCGTCATGGCATGCTCGTCCATCTCAGCGATGTCG
AGGCGGCACTCCCGCCTCCGGTTCCGGCGACGGTCCTCTTCGGTGACAACCCACGGACGA
GGCGCGAGGTTCTGCGTCCACTCCTGCATCATCACCTCAGAAAATTTCATCTCCCTACGA
GCCCGGTTGAGGCGCCACGTCGTCGCATCGTACGCACGAGCGACATCGTAGACGGTGTCG
AACGTGCCGAGGCCGAGGCGCATGTTGCCGGAACGGATCTCGGCATAGAAGGTGCCGGAG
GGGTGCGCGCGGACGCCGCGGTATCCCGAAGTTCCGCGATGGCGCGGCGGGGGCGAGGCG
AGAGAGAGACCGGTAGAGGACACGTGGCGAGGAGAGAGATGAGTGGGAGCGGTGGAAGGA
CACGTGGTCGAGCGCTGCATTTATAATGCACGTCAAATCTACCACGTGTCAGACTGCCTT
TTCCGCGCGTGCCAACTTTTCCCGTGCGGCAGATTATTCCACGATCGCTGAAACGTGCGC
AATCGTCCTACGCACGCTAAAAAATTATTTTTCTGTGCGCGGTGTTTTTGAAGCTGTTGT
TGTGGATGCTCTTATACTAGTAGTAGTACTGTATTCATGTGTGGCTCTTCTTTCACCGTG
GATTCCAATCCGAACTCAGACCTTGTTCGGTTAATCCCTCCCAGAAAGAGATTGGAGAGG
ATTGAAGGAGATTTAGGTAAAATATAAGACCTTTTAGAGATTCCACAAGGAGACTACATA
AGAAGCAAAATGAGTGAATCTATANTTTAAAATATGTCTATGTACATCCGAATGTAGTTC
ATAATGCAATCTCTAAAAGGTCTTATATT