Map Locations of contig_45045 (11093 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_45045

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_61053 2 1860 bp AK357129 Available Available None





CDS Structure of MLOC_61053






Contig Sequence (11093 bp)

>contig_45045 11093 assembly3_WGSMorex_rbca.fasta
TCCATGCAATCAACTTCCATAATCACCCGCGAGAACCCTCAAAGAGAAGCAAAATGAACG
CCTTGTCGCAAAGAAAGACCCTCCATGATCAAGGGTCCGAGATCCTGGTGAATGGCTTGC
ACCATGCACCTAGGAGGGTCGAGGAGGAGCGGGCAACCCCTCTGGTACCCCCTACCATCC
GCCAGATTGAGGGCTCTGTCTATGGTGATATTTATGAAACCATCATCACGCGGCCACTAC
CCGAAGCCCGACAATACATCGCGTCCTTTCGTGGAAGATGAAGGAGCGTAATAGCCTCCT
TTGTAGCTCTCATCATCGCTATGGGATCTCTACCTTCATCGCCATGATTGATGGATTCCT
GGAATGCCAAATGGGCCACATAATGGTAGTAATCTTAGCGCTATTATCTTCCGTGAAACT
GGGATCACAAATGATGTCCCTGGCCCATGTGTCCGGGTGTAGACTAGGAAGCCGGAGTCC
AAACCATGCACATGCCTCCTTCGAGAAACGTTGAGCATGTGAGCAATGAATTAGCGCATG
TTTCAGATCCTCATCCCTGGCTAAACATATCTTGAATCGACGAGTCTCTGCAATATGTCG
GTATTTGAGAGTGGTCTCATATGGAAGAATCCCGCGAAGAACTCTCCACCAGAATACCCT
CACTTTTGGAATGACATTCAATTACCACAAGGATATCCACAACTATTAATCATCATTTGA
GGTCTCAGTAGCTGTCCCTTCCTCTAGAGCCAATCGCTCGTTCTTAGTCACAAGAGCACA
GTAGTGTAGTTGCCAGACTTTTTGAATGCCCAAGCAAGAAAATCATCACCTCCTCCTTGT
CGGATAGGAATATTAATAATAGCCTCTGCATCCAAAGCAGTAAAATTATCCCTGACCATA
TCATGTCTCAAGTACCAATTAGTTGTATTGACGAGATCCTCCACCCTCTTAATGTTGGTG
TTGGGTGGCCTAGAGAGAGGTGTCATGGATATCGTTCGTGGAATCGATTTGTCGATCCAT
ACAGAGATGGTGCTGCCATCTCCCACACAGGAGATCAATCCACTTCTTAGGGCGTCCCTC
CCTGCCATGATTTCCTTCCAAGTGGCGGAGGCCGACTTGGGTGTAGTAGCATGCATGAAG
TCCATGTCGAGGAAGTAACGTCCCTTTAGAACTCTTGCACATAGGGAGTTAGGATTTGTC
AGAAAACGCCACCCGTGCTGTCCCAGCATAGCAAGGTTAAACAGATGCGAGTCTCTGAAG
CCCATCCCGCCCTTACACTTGGGTGTTGCAATAATTTTTTATCAAGAGAGCTGCTCCAAA
AATATTTAGCCATGGGAGAAGTTATACTCTTACAAACTTTCTTGGTTAACACAAAAGTGC
TCATTGGGTAGGTGGGGATAACTTGAACCACCGACTTCAACAATGTCTCACGACCTGCAC
AAGCTAATAGTTTCTCCGACCACCACTGAATTTTGGAAGGGGCCCTCTCACTGATGTGGT
CAAAGGTTCCACCTGTAATCCGACCAACAACAGTAGGGAGGCCCAGGTATTTCTCAATGG
AAGCCTCAACCTGAATGTTCAAGGTTGCCTTCAAAATTTGCCTCAGAGGAGTTGGTGTAT
TGGATGTGAAATAGATGGAGCTTTTATCTCTGTTAATACACTGACTAGAGGCGTCTCCAT
AGATTCTTCAAATTTCATTCAACCTCAATGCACTAGGATTACTTGCATTGATGAATATTA
AGGTGTCATGTGCAAATACTAAATGGGTAACACATGGTGATCTATATCTCACCTGTAGGC
CCCCCTCAATTGTACCACCATTGTAATACGTCAACAATGAGAAAAAACATTCAACACACA
ACAGAAATAGATACGGTGACACTGGGTCACCCTGCCTGAACCCTCTTGTTGGGGGTGAAG
AAAGGAAGCAGCTCCCGATTGACACGCACTGGAAACCGGATTGAAGAAACACACTTCATT
ATCAGCCTGACAAAGCACATGCTGAAACCCAAACTAGACAATATTGCTTCGAGATAGTGC
CACTCGACATGGTTGTAAGCCTTCATCATATCAAGCTTGACCGTGCAAGAAAAATTCTTC
TTCCTCCTCTTCATAGTATGAACACTTTCATATGCGACTAGTACGTTATCTATGATGAGG
CGTCCGGGAACGAAAGCACCGTGTTCTTCACCGATGATCAAATCCATCATGCTTCTCGAA
CGATTCGTGATAACATTAGCTGCAATCTTGTACAACACCGGGCACAAAGCTATAGGACGA
AACTGTGAAATTGACTGGGGATGGCATACCTTGGGTATTAGAGTAATGGATGTATCATTA
AAACCGGACGGTAGCTCACCACCATTGACAAAATCCAAAATTGCGAGAGTCACATCATTG
CCTAACAGCTCCCAATGACGTTGGTAAAACCCTGCAGTAAAACCGTCCACACTAGGAGCT
TTGGACGGTGCCATCTGAAACAACGCCACTTTAACCTCCTCTACCGTGTATGGTTTATTG
AGATCATCATTCATAGCCTCAGTTACTTTCATAGGCACATGAGATAATAGATGACTGGCA
TCAGCAAAGCCCTGCGATTGATACATGTTCTGATAAAAAGTTTGCACATCCAGCTTGTCC
TCACTTTCAAAAGCACAAACCGAGCCATCCGCACGTCGGAGGCCTGCAATCTTGTTCATT
CGTTTGTGGTGTGCCGCTTGTGCCTGAAAATAGGAAGTGTTTCGGTCTCACTCCCGGGGC
CAAGGAACTCAAGATCGCTCTCGGAGACACACCTCTTCTTGATGTAGAGCCTCCTTCAAA
TTTTTGACGACACTTTTCCTCCTTCATAGGGCCCGAACCGATAGATAGGCATCAAAGACA
ATCTAGCCTCTCCTAAAGCTGCTTGACGGTCTGAGTCAGGCTTCCAAACTCCCTATGACC
CCATGGCTCAAGCATCGCCTGCAAAGTTCCCAGCGTCGATGCAATACCCCGAAGCTCGGG
CGTGCGGTGTATGCCCCGCCAGGTGTCGCGAACTAAGCGGTCATAATCAACATGTGTATG
CTAGAAATTCTCGTAACATAACGGTTTCTTTGACGTCAGCCTGTTGGACATACTCTCCTT
AATTTCAGCAACCACGAAACAATGATCAGATTCAACCGAAGGGATGTGTCTTACCCATAT
ATGGTGAAAGAGGTGCCTAAACTCTTCATTTGCAAAAGCTCGATCTAGTCTTGTCTTGGC
ATTTGCCTCACCTCCTTGGCGATTATCTCAAGTATAGGCAGTACCAAGCGAGCCCAAATC
TTGTAAAGAGACCTCATCAACATCCTCTCTAAAAGCAAACATATGACTCTCAAATCGTGC
CGCTCTACTAAAGTGCTCATTGGCATACAAAGTTTCATTGTAATCTCCCATGCATAACCA
AGCAACATGTGGTATAGCATGAAGAGTGCAAGAACCGCCAACTGTGTTGATGATCTTTTT
TTTGCGGGTAATTCAGAGAGCTTTATTCATAAAAACGTCATCCTAGGACAATCAACCGGA
AAGCTGGTGACCAAGAAACTAGGAGTCTGATCGAGCCAACACTTTGTTACATTCAGTGTG
CCAGCATACTTAGCACATAGATGCGCCAGAACATTAGCTGCTCGGTTTACATGAACAATA
TTAAATAACTGAAAATTTCTAGCTAGCTCTCCAATTTCTAACAAAATAGGAGGCACAACC
GAACGAGAATTGTGGCGAGTGTTCCAGAGATGGACCATCTCCAGGCAATCAACTTCCATG
ATCACGTAGGAGAAACCACGGATATTAGCAAAACGCGCACCCTCCCGCATCGACATTGCT
TCAGCTATAAGTGGATCCGTGATACTCATATGTGGTTTGCACCAAGCTCCAAGGAAACGA
GTGGAGGACCTAGCCACCCCACCAGCACCACCGCAAATTCCTTCAGGGTTTAAAGCACCA
TCAGTGTTGATTTTGATCACTCCCAATTCTGGTGGCTTCCACCCATAGCCCGGCAGCACC
GTTGCCATGGACCTAGGCAATTCCAGAATTGCTAATGCTTGTTTTGTCCGTTTCATACAT
AAGACATGAACTACACCTCCATCTTCATGCTTAATTCGGTTTCTAGAGTGCTGGATTGAC
CACATGATAGTAATGATAATGGCCCGATCCTTGTCTCTAAACCGGTAATCACACAAGATG
TCCCGTGCCCAAGAATCTGGATGTAGTCTGGGTAGACGTATCTCAAACATAGCAAATGCT
TCGTCCCAAAAATGCCTTGCATGGGAACAATAAGTGCATGTTGTAAATCTTCATCCATGG
TCAAGCAAAATTTGCAACGGCCAATTTCTGCAATGCGCCTTGTTTTTAAGGTAGCTTCAT
CGGGAAGAATTCTGCGGAGAACACGCCACCAAAAAACACGAACTTTTGGTATGACATTTA
ACTTCCACAAGGTCTTCCGCAACTGTTGATCAACCGTTGAAGCTCCAGTAGCCGTCCCTT
CCTCTAGAGCAAGTCGCTCTACCTGAGTCACGAGAGCACGGTATGCCGTCTTAAACAGTG
TAGTTACCTGTTCTGTCAAAAGCCCACTCATAAAAATCATCACCTCCTCCGAATCGGAGT
GGTATGTTAAGAATTGCCTCCGCATCCGGAGCAATGAAGTTGTCCCGAACCTCCTGTTGG
CGCCACGTCGAGTTATCAGAGTCAATAAGATGAGAGACAACTTCCACCCACACATTAGCC
GGGCTCATTACATGCCTCATTGAGATAGTTCTGGGGATCCACTTTTCAGTCCAAACTGGG
ATGGAGCTGCCGTCACCAACTCTCTTAATCAGTCCCAAACGCAAAGCCTCTCTGTCCGCA
ATGATCGCTCGCCAAGTGGCCGAAGCAGATTTAGGGGCTGATGCTTGCATAAAGTCAGTA
TCTGGGAAGTTACGTCAGGCTTCATCATCAGGCGCCATCCTTGTTTTCCAAGTAGTGCTT
GGTTAAACTTAGAGCATCTCCACCCGCCCCCAAGTCGCCCTGCAAAAGCACTTCTTCAGC
GCCGACGGACGAAAAAAGTCCCACTCGTGCCCACAACGCCTCACTTTTCGTCGGATTTGA
CCAAAATTAGAGCCGACGCTCCCAGGCCAAACCCAGCCCATCGGGGGGCAATCGAAAGCG
CCGACGCTACCTTTTGCATGCAAATGGCCCATCATTAGTCGCCCATCCCCTCTCTCTCCT
TTTTTTCTCTCTCCTCCGCACATGGCATAGGAACCACGCACAGGAAACATGGCCGGCGTG
GAGTGGCCCGTCAGGTGGCTGGGAGTCCAATGACTAAAAAAAAGTTTACCCCTAAAATAA
AAGTTACGCCAGTGGAACCTTAATCGATGTAAAAAAGGCCTTCCAGGGAGCTCAACGGGT
GAAGATGCTCTTATGCATATCTCGTGAACCCATCCCACCTTGACACTTGGGAGTTGGGAG
TGGACATATTTTTCCAAGAAAACCAATGCATATACCTTTCTTATCAAGATAACTATTCCA
GAAATACTTAGCCATTGGTGAAGTAATACTCTTGCAAACTTGTTGACGATCTACAGCTCG
CGGAGCTCTGTAAAAAATCAGTGAAACCAAAAAGACCTGGTTAGGAATACAAGTGTGCAA
GGGTACGGATACATATAGAGTACACACTCGAGTCGAATCGAGTCTCGTTCCGTTTTTCCC
TGCGGGGCGGAGGTTCTTTGCCTGGTGACACCCAAACCTGAAGCGAACCCACGCTGTTAG
CCGACCCGTCCACTGCTGCTCCGGCCAGCCATGAGGGTCCTCGCGCTCCTCCTCTTACTA
TGGATCTCCGCCGCTGCCGCTGCATCCGCGCCGCCGCTCGAGACCCTCGGCATCCCTCCG
CAAGGTTCCCCCCGGATCTGACCGCGCTTTGCTTTCTTTTGCGCCTTCTCTGCCGTCTCC
AGGTAGATGCGGTTCTTAATTTAGCGTTGCTGGGCGCAGATGAGGCGTACTACAGGGGCG
GCGTGATCAAGTGCAAGGACGGGTCGGGCAAGTTCACCAGGGATCAGCTCAACGACGACT
TCTGCGACTGTCCCGACGGCACCGACGAGCCAGGTACCGCCTCTTTCTTCTTCTTTGCTT
AAAATACATGTTCTTTTTCTTCCGCGTCTGGTGTGATTTCTCCGAGATTGCTGTAGAGCC
AGGCTCCCTTACTTTCATGGCCTGTGCGCGTTAGTTTTAAACTCTGGGAGTCTTGGGAAC
CCATGCGTGCCGGAGATGTGTGAAAATTTGGATATTTTCTCTGTTAGGCTCATGTATTTG
TGCCAATGCTGTAGTTTATTGCAGGAGATCAGTTCATTGAATCATGTTCCCTTTTTCCTT
CGCAGGGACATCTGCCTGCCCGGAGGCGAAATTCTACTGCAAGAATGCCGGACATTCTCC
AATCACCATCTTCTCGTCGCGAGTGAATGATGGTATATGCGGTAAGAGGCTAATAGCAGT
TGCTTTTTCTTTGTTCCATTGATTTACTTGTTTTTTGTTAGAACTAAAGATTCATGTACA
ACAAAGACTTGAGCCCGAGAAAATGGCTGGAGCTCCTGTTCCATCAATCCTTTTATAACT
AGCTATTTTTGTTCCTCATTGCTTGCTAGATTGTTGTGATGGGAGTGATGAATACGGTAG
CAATGGCACTTGTAAGAATACATGCTGGGAAGCTGGGAAGGCGGCGAGGGAGAAGTTAAA
GAAGAAGGTAGCTACATATAAAAGTGGTGTCGTTATTCGGAATCAGGAAGTTGAAAAGGC
AAAATTGGCAATTGCTAAAGATGAAGCAGAGTTAACAAAACTGAAGGGTGAAGAGAAGAT
ACTCCAGGGGCTTGTCGACAAGCTCAAAGGTGTGCCCTCATAGCTAACTCGTCGTTTTGC
AAAGAGTTATGTGTAGCTTTTATGTGTCCAATACTGTCCATGCTGTGCAGAGCAAAAGAG
ATTAATAGAAAAGGCGGAGGAAGAGGAGCGCCTAATAAAAGAGAAGGAAGAAAAGAGAAT
TAAAGAAGAAGCTGAAAAGCAAGCTGCTGAGGAAAAGAAAGCATCTGATGCCTCTCAGGA
AACAGATTCTCAGGACACTGATGAGAAGTCACAAGAAGGTGAAAGCAAGGTTGGCGTTTC
TTCCTATATATTGGTTGACCCCTCGTCCACCTATTCCATGTTGGTTACTATCACGTAAGT
TCATTGTTCCAAATATTGGCCAGTTAATTGGCATCTTGGTCAGTTAATCGCTACCCGGTG
GGTCACCAAATAGCTGAAACTGAAAATCTACTTATTTATCCCTACTCAGCACCCGGCTGA
TATGGACATATGGTACTAGTTACCGATATCCTGAACATTGCCTCACTTTGAAGAACTATA
ACTCGTCATCCTCGTCCATAATATCATAAGTCGACTTACCTTGATAGGAGTACAGTTTGT
ACTTGAACAATTCACAGAAGTAATGAAATAATCATGAATTTAGTCTCTTGTATTTTTTAT
ATTTTTAAAATCATTTAAACTGTCCATTTACAAAATAAAGCCTTGAATGGTTGGTTTAGT
ACTTCAATTTTAGGGTTTTGCGCTAGATAAACTGAATTATTAACATCGAAAAAATGGATT
GCTAACTCCCCTTCTTGTGGTTGCAATTTTCATAAGCATGCACACATCAAGAAACAGATA
CAGCCCGTGTTCCCTGGAGGCTGTATGTTCCAAGTAAATCTATCAAGAAGTATTTTGTTC
AATTCAAGTCAAGGTAGGGTAAGGCGAGGTACCACCACCTAACTGCCTGAGGCGATATCG
TATGACCCCCCTCCCCCCGCCCCTGGATGGCAGCAGGTTTTATAATATTAAGTAATGCAG
CCTCCCTGACCTTCCCCTTCGTTGAATGATGAATCATTGTCAACCTCCCTGACAGATCCA
GTGGACTGGCCTCCTTCCCATGGTTTCTTCTTTATCTTCAGTAGCCCTTCTCTTTCACTC
TCTCAACGTCTGCTCATCAAGGCCCCAATCTAGCCAGGAAGAACGGAAGGGAGGAATAAG
AGACATACCCCAAAAAACAGAGATGAAGCAATAAGAGCCAGCAAAATGCCAAAAACAGAG
GGACGAGGAAAATCCGAACACTGAGCTTTCCTGCTGTGGATGGTAATGGAGGGAGAAGTT
GCACCCGCGCCAGAGCCAATGGGGATGGTCCCCGTCCCATCCCCTTCTCTTCTCTGATTT
GGTGACTCAACCAACCTATTGGTCCCTTATTTTCTCATGCCATGTTCCCTACCCGCCAAA
CAATTTATGCTGCTCGCCCTGCCTCGTGGCGATTCCTGATTGCGCCATGGAGACGCCATG
GCTTCAAGGTGAAAAGCATTGCGACGAAGTTTGGATGATCTGTTGCTATGAGCCTATGAC
AATTCAGAACCCTTTGATGCTTTGTCAACTGCTTTGCTTACGTAAAACCTAATGGACAAA
GGGCGTACCCAGTGCTGAAAGCTCCCACACAAGGTGGGGTCTGGGAAAGGGAATTTCTAG
ACAGCCTCACCCTTGCAAAATAATTGTGCAAGGAGGGTGGTTCGAACCCAGGACCTCCAG
CAGAGACTACCACGGTTAACAATAAGTGACAGCTTCATAATAATTGCCACGGTTAACTAA
GAAAGCCCATATGACTAACACAGAAATGGCAACCATTGGCAAATTAGTGAAGTCCTCACT
CCTCACGTATGAGATATAACCATATAGGTCCTCATTGCACATCTTGTTAGTTCACCTCTA
TAAAAATATATTTATGTTATTTTGTTACTTACTGTTTAACATAGGTAGCTGAACATCATG
ATGGAGATGTCACGGACCATGACCATCACTCACCGGAAGGCCAGACATCTGTTGAAGAGG
TATAGTTAACCTTTGGTACGAGGAAATCGATATGCTAGTTCGTTTCAGTATCAAACTTGA
GTGTATATATATGCTGTTTTTCCATGTCAGCCTGACATTAAAGCTGGAACTGGAGATGAT
GCACCACCGGTGGAGACATCTGCAGTACCTACAGATGAGCAGGTGGTGTAGTAACTGCTT
TGCAGCTGATTCATGTCACTGAACTTGTTTAATATTTGCTATTGTGATGTGTTTGTCTAG
ATTTCTATGTCCTGTGACTAATAAGCTTTGTCCAAAACAGCACTTGCTTGTCTTTTCACA
TTGTTGTCCATATCTCCCATTATATTCGGTTAAGGATGATTGAATTTTTGTGTGGACGCT
ATTATTTATTACTTATACAATTATGATACCCAAAACATATTTGTACAATTTTTGTTGATC
TTTTGGGAATGCATTTCCCATTCCAAGTTATGAAGCATTATTGTATGTTCTGCAGGACCC
TACTTCTGCCGACTCTGAAGGTTTGTCAAAGGAGGAATTGGGTCGTCTGGTGGCTTCTCG
CTGGACTGGAGAAAATGTAGATGATGTTGGTAAAAGCGATAAAAAGGGCCATGAGGATGA
GATGGATATACCAGAACCTGCAGAAGAAGCATTTGAAGATGAGCATGATATACCAGAACC
TGTAGAAGAAAATTATGCTGGCTATCATTCAGAAGTTGAGGATGATAGGCACAAATTTGA
AGACGAAGAGTTGTCTAATATATCAGATGATGAATATGTTGATGATCATGAAGAACCTGA
TGAATCCTATAAATCTGATGACGACCGGAAAGGTGATGACCATTCAGGTATAGTATTTCT
ACATGACCACAATAATTCCTGTCCTATTGTATGCGGTTTTAAATTATCCTATTGTATGTG
GGTTTTTTATATTTGATTTGTTCCTTCAGATTTAACTGCCTCAGGACAAACATCATGGCT
AGACAAGATTCAGAAAACTGTACAGAATGTTCTACAAAAATTCAACTTTTTCAAGACCCC
TGTTGATTTATCAGGTCAGTCGTACATACTACTTCTGTTGATCCTTCATGATTTATATGA
GGATGTAGTAACACTTACACATTTATGATTATAGAGGCTGCTCATGTTCGGAAGGAGTAT
GATGATGCCAGCTCAAAGCTGTCCAAAATTCAGTCTAGGATAACCTCTCTGACAGATAAG
CTAAAGCAAGACTTTGGTAAGTTAATTGAAACTTTGCCCCCCTCAGTGGCTGAGTGCATC
ACCCACTTGTATATTTTGCAGCTATTAGTTTTGTTAGGGATTTTTTAATCAAATATCGTG
CTTTCCGTTGATGAAATTACTTCTTAAGCCATCCAGTAAATGTCAATGAGAACTGTGCTA
ACATGGTTCCTGAGCAAAAACACACTGTTAGCATGATTTTTACCTCGACCGGAGATTTTG
TTGAAGTTCTGTAAAATAAGCTGTTTCTTAAAATGGCCAAAGAATAACTTAGAGTCATTT
GCAGGATAGTGTAATCCAACCATAGATAAAGAACAGCCCATTGTATGTTTCTTTCATATA
TCTTTTCGGCTTTATTTTTAGCGGAATCTACAAAGTTTGCATTTCGACCTGTGGTACTTA
AAATTCATTTTTCTCTTTTTGAGGCTTCATTTCTTTAGAACATTATTGCTCTGCATTACA
AGTTAACTGCTACTCTAGATGCTGACCTCATCTGATTTGTTAGTCTAGTTAATACATTAC
CTCTGTAAACTTGTGAAAAATTGGAACTTATTGAAATGCATCCTTGTTAGGTAAGGAAAA
GGAGTTCTATTACTTCTATGACCAGTGCTTTGAGGGCAAGGAGGGCAAGTATGTATTCCA
TCTCTAAACAAAAATTCATACTTTTTTCCCCACTTTATATTTGGTTAAGTTTACTGATTT
TTGAATCATGATCCTTATTGGCAGGTATGTTTACAAGGTCTGTCCATACAAGAAAGCTTC
ACAGGTTGAAGGACACAGTTCCACCAACCTGGGGTATGTTTCTCGTGCTCCTTTCAGATT
TAGTATTGTTATTGGTTATTTCAATATTTTCTAATGTAATCCATTGGCTAAACTTCAGAT
GTAACTTCATATTTAGTTTGGTCCACTACCACTATCATATTGATATGTATGGATGTTGCA
GTATATGTGGATTGCACTAGCCCTTTTCATCAGTTCGGACTTTTGGTTGCGTT