| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
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Predicted Genes from contig_45012
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_61021 |
6 |
4934 bp |
MLOC_61021.2 |
Available |
Available |
LOC_Os12g44170.1, FRAME:+3, EVALUE:0.0, 13112.m04667 protein pentatricopeptide, putative, expressed |
| MLOC_61023 |
5 |
2188 bp |
MLOC_61023.1 |
Available |
Available |
LOC_Os12g44160.2, FRAME:+3, EVALUE:0.0, 13112.m04666 protein oxidoreductase, putative, expressed |
| MLOC_61022 |
1 |
212 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_61021
CDS Structure of MLOC_61023
CDS Structure of MLOC_61022
Contig Sequence (10664 bp)
>contig_45012 10664 assembly3_WGSMorex_rbca.fasta
TAGGGCATATTTCCAACAGTGGTTGCTATATATATATAGCTGGATGAAAGCCTATTTCGA
AAGTCTAATATGTTATAAGAAAATAGGCTCTAAGAGGGAAGCATTGATTTGACTCCTGAG
CTTAGCTGCACCCGCGTCGGCGAAAAAAAGAAAAACAAATAGTAGAAAATTCAAAAAAAA
AAGTGTGGTTGATAATTTGATGCGTGAGGTTCGCTTCAAATTTCAACTTGTTTGGAAGTC
TGAGCAGGTGTTGGCAAAAAAAGACAAATCGGGGTCTGTAAAAAAAGGTTAGCTGTTCAC
GAAGTGTTCCGACCCGATTTTTCTTTTTTTACCGAGAGTTGCTGAGATGTCGTTTCATTC
CAGTCCAATCAACTCTCATCCGCCACCCATGACCGCCGGTCTTCTCCGGCATGGCGGGCA
ACAGATTGGAGTCCTTCACCTCCAGATCCGTCGACCACAAGCTCATCCATGCGGCCCTTA
GGATGATACGACAGTCAGGCTTGCGCTCCGTCGCTCCCAGGAGGCGGCCGTCCGACGGCA
GCGCTCGGACTCGTAACTTCGGAAATCCATTACATCGGCACACCCGGTGCTTGGATCTAA
CATCGTCGTCTCATCGAAGACAGTGCGCGGTCCATATGACACCCGAACGTAGTGGCAGGC
ATGCAACCCCCTCCATCGGTGCACCGAGGACGCACCATGGACGTCCGCGGGACGTTAACA
TGGCGCGGCGTGCCCGTCGTGAGAGACAACGGGCGCGGGAGGTGACAGAGGCCCTCACGG
CGATGGACGTTGGAGAGGAGGAGCCACACTCTCCGGCGGCCCGTATGGTGCACGAGCGTA
GGCGCCGCAACCGCGTCGCGGTGTACGTCGGCTCCTTCCAAAAAGGATCCATCATCAACC
TCGTGTCCATCGACACCGTCCTGATTACAGTCTCCTCTCCGACGAGGAAGAGTAAGGCAT
GGAAGACAGTCTGGACATTTTTCCGGCCGTGCGGAAAACTCCATTTTTCTTTTCCTTTCT
ATAGCAGGCAAGCAAGCACGTGCTGGTTTGGCATTACATCATTCGGCCTTCCATGATATG
ATGAATATGATAATGATTTGGAGGTTGGATATATATATAATTGGATAAGGAAGGAAGCGT
CCGAGAAGGTCGGCGGCCGGCGCTGACCGTCTTGACTTGCGAAGGAAGTTGTCCTTTTTG
CACGCAGCCCCTCCTTTTCCTCCTCGCGTCGCCAAACCATCCACCCACCCCCCTTCCCCA
TCAGCGGCAGCCGTGGTGCGCCGTGCGCCGCCGAAAGCAGAGATCTTTCCGGAGATCCAC
TCCCAACAAATCCGGCCACCCTCCCTCCTCCTCCTCCTCCTCCTCCTCCCTCGATCGCGC
CCTCCTCCACTCCAAGTCCAACCTACCTACCTCCGCCCTCCTCGCGGTAGGGATCGATTG
GCTCGGGGGGGAGAAGGCGACGTCGCCGCCGGGTCGCCTTCCCGCCCCTTCCCTTCCCTT
GCCCTCCCTCCTCGGATGCCCCTCCCTTCCCGTCGCAAGGTGAGCAAAGCAAGGATCTCC
TTTCCCTACTCGCGCCGTCACGCGTGCCATTGCTAGTAGGAGTATTCGCTTCCGCCAAAG
GGGATTCTGCGAATGCCTCGTCCTCGGGATCGCCGGTGGCCGGCGGCCTACCTACCCACC
CCGTCGCCGGCGACCGAGAAGAAGCCCGCCCTCTTGCCTTCTTGCTTGCTACTACCAGTA
CGCCAAACCGATTGATTCAATCCCCACGGTCCACAACAACACGGCAAAAAAAATTCCTTG
TGGTTCCCCCCGTTGCGTCCAGCTCTCACACACGAGCTCCCATTTTATTACTACTACTAG
AACTGTTGTTAGTAGTAGTATCTTTGTGCAGATAATCTTTGCAACTCTTTTCCTGAGAGA
AAGAGATTACAACATCGGAACACCACCACTCGAGGTTCTGCCAGCCACAGATTTGCCCTT
AATCCAGGGCTTCCATGCGAGCTTCGTTATCTCCATTTTTTTCCTTATACAAGTTGAAGG
TTTCAAGCTAAAAGGTGAAGCAGGGTTGTTCATTATGGACTTATTCTTAAGCTCTCATCC
AACTAGAACCCTGCAGAGATAACCTTCACTAGGCCAAACATTTGGGGGACTTTTCGGCTT
ACACTGTAAATCCAACATCAATTTTGTAGTCCAGGCTACTAAAAACTCCAGTGAAGCTGG
CTTCTGACCGGCCGTGACACCCACCCATTCGGCACATGGAATCCTCTGTTTCTGAAGAAA
GCTTCACTAAGAACTGCACTTCTGTAGCTTAGTATAAATGAAGTTTTTGCTTGTTCATCA
TTTGGTTTCTGCTTCGGACATCCATGAGCTTTTGACCGTGCAGGAATAGGAGAGGTTATA
AAACAGATGCTCACAAGTTAGGGTTAACTATATAAGACTATATAGGGCAGTTGCTTTGCA
GCACACAATCTACTAGGCTAATTGAGTTCATGCTACCACTGATTTGATTTTTATACAGCT
AATAATGCATCATAGTAAGCAGTATCGTGCTATACGCAAATTTTGACCACTTTTTTTTGC
AGGTCTGACATTGAGGGCCAACATGGAGCTCTTTGGTGGGTAGAAGTCCACATATATAGG
CATTCTTGAAATTTGTTGATTAATTTACCCACCAGGAAAGCCCCCCCCCCCCCCCCCCTC
CCTAACCTACATTTACGCATGCTTGTTTTGTGACACTTATTTTGGGACGGAGGTAGTAGT
AAATTCTTGCTAACACTATGTAAACTTTATATTGCAGTTCATGTTGAGGGCAAAGCAACT
CAGCACGCTAACCCAGTGTGCACGGTCCTTCTATCTTAGTGGGTCAAGGTGTGGTAGTGC
GGATGGAGCTTCGTGCACGTGCCCTGATGATGACGCTTGTGGTTCAAAGAGGCAGACTGC
AAGTGCTATCGAGCGCAGATCTTCTGTGAAGGTTCAGCCTCCGTCTGCGCAGCATGTTGC
TGGTGGTGCTGCTGGATACCCAACTCATCAAGCTGTTAATGTCATTCCTTCGACCTCATC
TCCAGACAAGGAGCCAGCATCAAGTAACAGAGGTAGCCATCCTGGTAACCGTCAGGTTCA
AGGAAATAATTATGTGCAGCCATCTAAGCAGGCCGCCAGGGGCATTTCTCAGTCCGGAAT
CGCAGGAGCCGGCGTGTATAATGAGTTGGTAAATTTGAGGCCCTCCTCGAATAACGGAAG
CAGTAAGCAAGCTCCACAGGCTGGTGGTGCCAACTATTCTAACAAGCCATTATCATCTGG
TGGCCAGCCTTCTTCTAATAACAAGGCAAATAATCAGCATAGCCATGCTGGGCAAAATAC
GCCTTGTGCACCTTCCATGCAAAATGATTTTGGGAAGGGGGGCTCAAGACCTGGATACCA
CGCAAAGCCGAAGCAGAATTTCTCAGGGCCAGCGGCTGCAGTTTCCGGTTCACCGTCACA
AGTAAGGAATCAAAGGCACCCTAATCAGGGCCATTCTAATAATAATGGTCCCAATTCAGA
TGGCAGGTGGGCCGGTGTTCAAACTCGCAACTTCTCAGCTCCAATGACTGCATATAGTGG
TGGTCCCTCTGACAAACCTCAGGGCCCTTCAGTAGGAACAATGAAAGGTCATGGCGGAGG
ACCGCAGTCTAACCTAAGATCACTGAAGTCATTGCGGGCGGTCGAACAGTACTACCATAC
GCTGCAGCAGATGAAATGGGGTCCCATGACGGAACATGTTCTTGATGGTCTCCGTTGCAA
GATCGACGCGTTCCAGGCCAATCAAGTGCTCAAGCTGCTCCACGACCACAATATCGCGCT
TGGTTTCTTCCATTGGTTGAAGCGGCAGCCAGGGTTCAAGCATGATGGCCACACCTACAC
CACCATGATCGGGATCCTCGGACAGGCGAAGCAGTTTGGCACGATGAGAAAGCTTCTCGA
TGAAATGAGCTCGGTAAACTGCAAGCCAACCGTGGTGACATACAACAGAATAATACACGC
TTACGGCCGTGCAAACTATCTGAGGGAGGCTGTCAAGGTCTTCGAGGAGATGGAGGGAGC
CGGTTACCAGCCTGACCGCGTCACGTACTGTACGCTGATCGACATCCATGCTAAGTCAGG
GTACCTGGAAGTGGCCATGGATCTGTACGGCAGGATGCAGGAGGTCGGCCTCTCGCCCGA
TACATTCACCTACAGCGCCATGGTCAACTGCCTCGGAAAAGGGGGCCAGCTCGCGGCCGC
CTACAAGCTTTTCTGCGAGATGATCGACAACGGGTGCACGCCCAACCTGGTCACCTACAA
CATAATAATCGCCCTGCAGGCCAAGGCGAGGAACTATGACAATGTCGTCAAGCTCTACAG
AGACATGCAGATCGCTGGGTTCCGCCCCGACAAGATAACCTACAGCATCGTCATGGAGGT
TCTTGGTCACTGTGGTCACCTGGACGAGGCCGAGGCCGTCTTCCTCGAGATGAGGCGCGA
CTGGGCTCCCGATGAGCCCGTGTACGGCCTCCTAGTGGACCTCTGGGGCAAGGCCGGGAA
CGTCGACAAGGCGTTAGGGTGGTACCATGCCATGCTCCAGGACGGTCTGCAGCCCAATGT
GCCCACCTGCAACTCCCTCCTCAGCGCCTTCCTCAAGCTCAACAGGTTCCAGGACGCCTA
CGGCGTGCTCCAGAACATGCTCGCACAGGGCCTCGTCCCGTCTCTCCAGACCTACACCTT
GCTGCTCAGCTGCTGCACCGACGCGCACGCGCAGATGGGGTTGTGCTGCCAGCTCATGGC
CATCACCGGACACCCGGCCCACATGTTCCTGCTCTACCTGCCCGACGCCGAGCCCGGCGG
CGAGAACGTGAGGGACCATGCCAGGTATTTCCTGGACATGATGCACAGCGAGGACAGGGA
GAGCAAGCGGGGCATAATGGACGCGGTCATAGACTTCCTCCACAAGTCGGGGCTCAAGGA
GGAGGCCGGCTTCATCTGGGAGGTAGCCGCGCAGAGGAACGTCTACCCGGACTCCGTCAG
GGAGAAGAGCTCCTCCTACTGGCTCATCAACCTCCACCTCATGTCTGAGGGCACCGCCGT
CACCGCCCTCTCCAGGACGCTCGCATGGTTCCACAGGCAGATGCTGCTCATGGGGTCCTG
CCCGGAGAGGATCGACATCGTCACCGGCTGGGGGAGGAGGAGCAGGGTCACCGGGTCGTC
GCTCGTCCGGCAGTCCATCGAGAAGCTGCTGCATCTCTTCCAGTTCCCGCTCTTCGCCGC
GCGCGGCAACACCGGCTGCTTCGTCGGGTGCGGGGAGCCGCTCAGCCAGTGGCTGCACAA
CCCCTACGTCGAGCGCATGCATCTGCTCTAGCTCTAGTTGTTACTTGTTAGTGCCTGCTA
CATTATTGCTAGCTAGGTTATCATCATCAGCTAGGAATAAACAACTTCATTAGCTTAGCT
AGCTGATGAACAGGTGCAGTTTTGTTCTTATGGTTATCAAACAGTCTCCTTGGATTGGAT
GAAGCATCTGTTCTAGTTTCATCGACTGTAGCGTCATCTGTTCTAGAATTTGTCTGTAGT
GTGGTGTTGAAACTGAAACTTACTTATCTGTGATGAGAACATTTAGAGATTGCATTGTTG
CGTTCAGGATTATGTAGACAATGGAATTGTTTTATGTTTCAAGTTACATCAATCAGGTGC
TGTAGCTGTAAGTTGCAATCTATTCTTCTGGAAAGCAATGCACTGGGTATATTGATCTTC
TGAATATATTACTCCAATGTTCACATCCAATTCAGAAGCTGTTCATCCAGAGAACTGCTT
CAGGGTCACAAAAATGAGAACTGTCTCTCAACATTTAGAGATTGCATTGTTGCATTGCGG
AATAGACAAGTTATTTATCTGTGGGAACATTTTGGGACTGCATTGTTGCATTCTGAATTA
TACAGTTTGTGAGAATTGTTCATTTATCTGTGAGAAGGAACATTAAGAGATTGATGTGCT
GAATTCTAAATTCGACAATGAGGATTGTTTTTATGTTTCAGTACACCAGTCACCTGGTGC
AGTAGCTGTAAGTTCCAGCCTAACCTTTGCACTGGGTCTATTGATCTTCTGATTCTTACT
GCCAAGTGCCAAGTTTACAAGGATTCACAAGGCTGGTCTTACTCCACAACAAAATTGTCG
CTGCGACGCGAAAATACAATTAGTCGATGTGAATCTTGGTCATCTTTGCTTGTTTTCGAG
CTACTCCTACAGTGCTGCCAAGCTACACTCAGAAGCTTTTACAAAGCTTGTCAGCCAATA
AGAATCCTTGAATCACTGAATTTCCTTAAGATGCTCGCAGTTGCAAACAAGCCTGCTCTT
CTTTGAGGATGCTGGTTGATGCCAATGTGCCTATGCTTGTCCCAGCTATGTACCCACCAG
TCCATGCATTCTGTGGAAAGCAAAGAGCAAATGCTAAGTTGAAACCCTTTTTGTTCCCAC
CTCAAAGGTTTTCACTAATCCACTGTTCACTTGGAAGTGATATGATCTGAAATTTCATAA
TCATTACCTGAAAGTTGAATCCGCCGGTGACCCCGTCGACGTTAAGAACCTACAGCAACA
TCGCACACTCTGTAAGACACCAAGATGGCCAGAGTGTTGCAAGTTCGGGAACAGCTGTGC
TATTACAGTATTACCTCTCCGGCAAAGAACAGATTGGGCTGCTTCTTGCTTTCCATAGTG
CTAAGCGATATCTTTACAACAGATGAACAAATTACTTTTTTTTTTTGCGCGTCGGGTCAT
GTTTATGTTAACTGCAATTAAGTTGTCGACTAATAAATACCTCTGAAAGTGGAACACCTC
CAGCTGTCACGAATTCATCTTTGAATTGACCCTACATATGATGAGGAACAACGACACAGT
GAGTAAACACGTATCACGTCGCTGGCAAAAATTTCAAGTGATATATTGAGATACCACATA
CCTTCCCAACAACCTCAAACATCCACTGTTTTAAACGAAGGGCTATTGCATTTAGATGAT
TTTTCGGTACGGTAGCCCAGTGCATATCACCATCTAAACTCTGCAAGAGGAGACTTCAAA
TGAGCAAATCTTTCTGATTAAAGGGATAAGGACAGAATTCAGCAATATTGCAAACCTCCT
GTTCTAGAAGGAATCCCCAAAACCTCTTCACCAGACCAAACTCCTTGGGAAAGGAGTTAT
TTACTTTGCTCTTCTGCAGAGATTAAAAAAAAAAAATCTTAGTTCAGCTTCACCATAAAC
ATTTTACAAGGGCAATATGGATTTTTCACAGGGAATACTTCTCTGATAAATTACATAAGC
CATACAAAACATTGGTTAGAGCACTGTAACATGGCAGATAAATCAGAATGATGCCAAGGT
GGCTATAAGTATCTGTGTCTGCAATAAAATCTCCACTAAAATTGAACTCAGAAAGCCTAA
TAAGGGCGACATAAAGAAGCAGAGAGTATTATTTATCTTGTTGAAAATATTTACAAGAAC
TGTTACTAAAGCAACATGCAATCAAGAGCAGAGTTAACATTGAAAAACTAAGATTCTCAG
GAGAAGACTCCGAAGGATTAACAAAGCTACATTACAAATGCAGAGGGAAAGATCAGAACC
GCATTTTTGTCTTTGTGCTGGAAAAGGATGCGCTTCACGTCCTCAATGTGAATGTCAGGT
ATGAAGTCAACCATGAGCTTTGCTGTGTCAAAAGAATGTACAGATCCCAATAAGAAGAAG
CAGATGAGTTTGGCAATTACTTGTACGTCTTCCATGCTGTTTTAAAATACTATTGTACTG
GAAAATTTCATGTGATCGATGGAACACAAAATGCACCACCTGAAGAGACAAAACTGTAAA
TCCAATTATGTCCCTTACAGTTGCGTTGGATGACAATGTTAGAAACGTAATGTCACTTGT
ACAATTTCTTCGGATCTCACCTTGGTACTTGTCCTGATAAAGTTCACGTGCTCCCCATGC
AGATAATCGAAGAACAACAGGGCCACTAAGCCCCCAGTGTGTAACCAACATAGGTCCAGT
CTGTAATGGGCAAGCAATTAAATAAGCAAACATCTACGACGGAGCATGTTGCTGAAGGTG
GGCGGCTCACCTGAGTTAATTCAGGAGCGCTTTTCTGAATGCCATCTAGCATCAATTTTG
CTTTGACTCTTGTGAACGTAACCTACATGGCAGAAGAAAAGGATGGGGATAATTTCTGTC
CAGTCACCAGTGAGCATGAGATTTGTAATAGCGGTTATGGATGAATACCCCGGAGAGATC
AGCCAGTCGCTTGTCTGCAATTTTAAATGTGAATAAGCTTGGCACCGGCGGAATAATAGA
GTGACCATAATGTGCAGCAAATGAGTAGCCCTGCGAGTAAGAGATATTGTAAGGGGGTAG
CCCTAGTAGAGCAAGCAACTAAGCATCTATCCAGTATTCACATACCTGCTGGCTGCTCCC
TGTAGCAACCAAGACATAATTAGCGCTGATGTAATCGACAAAATCAATGGTACGCTTCTC
AACTTCCACAACAAACTTCCCGTTGTCATCGACGGATGCACCGGACACCGATTTACCAGC
CTGCAGGGAAACTTCAAAAGGAACTCAATTCCAGAAAATTGTTTACTCACACTGAAGGGT
GTGTGGATGATAACTGAACGGACCGCAGAGAGCTAAATAGCATTAGATACCTCCCAGTCT
TCTCGCCTCGTTCAGCAGGCAGTCTACTACCGATGCAGAGTTGTCAGTGACAGGAAAGAC
TCTACCGTCATCTTCGGTCTGACACGACAATCAAAACAGTAGACACGGATAAGTATACTG
GCTTCAGTGAATGCACAAGCAAGATCCTCAAGTAAATGTGGTACGAACTAAGCTACCTTA
AGCTCCACACCATGATCTGAGAACCAGTGCATGGTATCCTGTGGCCCATGACTGCGAAAG
AAGGATCCCCGGAGTTCCTTGTGCCCCCTAGGATAATTTCTCGCCAGCCCCTGCGAAAGA
ACTAACTGACTGACTGACACAACACAATGGCCACAATTACAAATCCACAGCAGTAATATG
GAGTATGAAAAGCAATGGACGCAGCAGGGCGTACCGACGGCTCGAGATGGTGCCCGTTGG
TGACGTTGCACCGCCCGCCGCCGGAGATCTTGACCTGCAACCAGTAAATTCCGGAGATTC
ATCACCAATAGCAGCTCAGCTCTTTTTTTATTTTCCAGTGCGATGGAGATCAAGGCATCG
ATTGGCAGCATGGTACCTTGGACAAGAACTTGCCTTTCTCGACGACCACCACGTTGAGGT
GGGGAGCCAGGGTCTTGGCCCTTATGGACGCGTACACCCCTGCGGCGCCTCCGCCCACCA
CCACCAGCGACTGCTCGTCCTCCTGCATGGCGAACACCGTCAGGAGCTAGGGCCGGCGGC
TGAGCTGGGTTAATCAGTTACCTGCTCGCGGGCGTGGCCGGAGGGCGCCGAGGCGCAGGC
GGAGGAGGAGGAGCGGCGTCTCCCGCGCAGGACGAAGGGGGTGGCGCGGCGAGCGGCGGC
GGCGGCGGCGGCGGGCTGGAGCCACGGCCACTGCGGCGGCATGTCGTCGACGAGTTCGGT
GGAAGGCTGGACGCCGAGGTGTGTGTGACTGGATAGTGTGGACCCATGGGCCTCGACAGG
CTGTATTGCGGGCCGGGTTTTAATTGGGCTGGAGCACAAACTAACTTATGATATTATTTT
CAAGTGACTTTTGCGGATTCGCTAAAAAAAGGTGACTTTATAGAGTACGAGAAAAAAAAA
AGGTTTTTCGATGGTGAAGGCAGCGTCACACCAAAACTTTATTTGGCTATATCCCATCTT
ATCTTTATGCGGCCTTTGCAACCGACATTGTTCGTCAAGGAGATAGACAATCGATGGCGA
TTTAGCCGATTGTCAACCGACGCTTAGGCTTGACGGCGGGCCATGACAATGACGATAAAG
CTCTCTAGTTTCAGCTTTTTTCGCTCTAGGCTTCTCCCCCGATGATCTTGAGAATGATCC
GTCGTTACGGGTCATGTCATTGGTTTTCGTCGGTGACTGTGGGCACACATCGGAGCGTGG
CCTCCCCCAATCTTGTCATGTATCTTTGTCTTACGCGGACACCGCAGCGACGTCAGCGAG
CAGCTTTCATTCTACATGTGTGTGTGTGGGGCGACATAGTCGTTGCTCTCCTCATCTTCG
TTCTCTGCTCGGACAATGTGATGACAACCGAGCGAGCGTTGCTGGATTCGGTTCAAGCGG
ATTTTCTTGCGGACTTTGATGTAAATGTAAATGTGGAGATAACTATCATACGCCTGGATA
TCTTGCTACTATCTTTTAAAGAAAGTCATAATGTAGTTTTTTTTCATAATATATGAGACG
GGGATACATAGTCCACAGTAAATGGTGATATTTTCCTTGGACTACATTGGTTTTCCTTAG
TTAAAATTACTCCATGTATTAGGCTAAAAAACAGTAGTAATAGGTGGAAAAACAGGCTTC
AAGGCCCACTAATTAACTAGGTTGGCATTGGTTTGGTGAAAGTACATGCTATGCCCCTAA
TCGACTTTTGATGTTAATGACAACACATACGTAGGAAACTAATCATATTTGTTGAGTGTA
TCTCAGGATGGCAAGTACCTTAGTAGATTGGGAATTATGTGCCA
