Contig Data
morexGenes
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Map Locations of contig_44980 (4730 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_44980

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60992 1 1862 bp MLOC_60992.1 Available Available LOC_Os01g59150.2, FRAME:+2, EVALUE:0.0, 13101.m06285 protein tubulin/FtsZ domain containing protein, putative, expressed
MLOC_60991 1 490 bp MLOC_60991.1 Available Available LOC_Os01g59160.1, FRAME:+3, EVALUE:6e-19, 13101.m06286 protein UBA/TS-N domain containing protein, expressed





CDS Structure of MLOC_60992






CDS Structure of MLOC_60991






Contig Sequence (4730 bp)

>contig_44980 4730 assembly3_WGSMorex_rbca.fasta
TACTACCATTACGGAAGGCCTTAGATTGAGCATATCCGATATTCACTGGTTTAACTGACC
ATTGTTCCTTATCAAATTCGATGCAGGGCGTGCACACAGCTACCCCAGATCCAACGGAGT
CGTCGATTGCCACGCTTGTCTCCATGGGTTTTGATCGTGCTTCTGCAATTCAGGCTCTTG
CACTGACAAATAATGATGTAAATTTAGCCTCGAACATCCTGCTTGAAGCACAATCCACGT
AGAAACATTCCAGGCTGAAGACTGATACTTTGTAAATGTGAAACATTTAGTTAACGTATT
TTTCTGGTCCATACTATTTTCAGGATTTGTTAATTTTATAACTCCATTCCACACGAGTTA
GAAACATTGAAAAAAATGAACAGGAACTCCCGCTGGGCTGCTGTGTGTAATATCTCCGTT
TTGAAACTGCCGAAGTGCAAATGAGGTTCCGTGTAGCACAAAATATGCATCCATAGTCTG
AAATATTCTTGCCTTTCTTATTTGTTCATGGAAAATTTAGTACTCCCTTCATCATAGTAT
ATTGGACGTATCTCCAAAACGATAATTTTTTACAATTAGAAGAAAATAAGGCGTATGTCA
TTAATTAGCCTATTAATTAGGGTGTTTTGGAAACCGTCTCCACCAATACATGCAAGAAAG
TCACTCGTTTAGTGGACGGGGTTACTAATGCATCAGTTGTTTTTCCTACCAATAGAAAAA
CAATTAGGTCCCAAAACCTGTGAGATACGTCCAATATACTGTAATGGAGAAAGTAAAGAA
TACTGTATGTGCTAATGTTTTTTAGGGAATAGCTGGTTTTCAATCAGTTTTCCTTGCAAT
AAAATTGTATCAATTTCTTTTCAAAAATACATCAGGTGGGAAGTCTTTCCCCATGACCGT
TCCAGAAAAAGGAAACCCTCAGGAACCGTGAATTACTGAAATTTAAGCTCTACCCAGTTG
GCGAGGGACCCTAAAAACGTAGGAGTAAGAATTTGAGCTCAGTTCAGCAAGTGAAAATTT
TAATCTCAGGCAGAATCGATGAGCGCCAGGCATCATACAGCAATGTACAACACAGTAGTC
TGACAGGCTGAGGCCACTCGAGAAATTCAATACTAGTCTGTTGGAACCATGATACACCCT
GCAAACATTTTGCCGAAACAATTTGCAAAGAAATACCAACTCAGAAAGCCTGAATTCACC
ACCAGAGAGGTCCAGAAATGTCCGACACAGAACATACCGTACGGCATCAAGTGATACAAT
ACCCAGAAGGTGCCATAACATGGAAAATACAAAGCTTAGGAAAGGCAGGAAGAATGGCGG
TGGCGTACAAGCGGTAGTTGCGATGATAAACAGATTCATAACAAAGCACCAAACAGATCA
AACTCTGCCCCTAGAACCCCCACCCAGCAAAGCACCACACAGACCTCCCCCTCCTTACAT
GTCGTCCTCGGCCTCCTGATCCTCATCCTCGTACTCGCCCTCCTCGTCGGCAGTGGCATC
CTGGTACTGCTGGTACTCTGAGACGAGGTCGTTCATGTTGCTCTCGGCCTCGGTGAACTC
CATCTCGTCCATGCCTTCGCCAGTGTACCAATGCAAGAAAGCCTTCCTCCTGAACATGGC
AGTGAACTGCTCGCTCACCCTCCGGAACATCTCCTGGATGGAGGTCGAGTTGCCGACGAA
GGTGGACGCCATCGAGAGCCCTGTCGGCGGGATGTCACAGACGCTGGACTTCACGTTGTT
GGGGATCCACTCCACGAAGTAGGACGAGTTCTTGTTCTGGACGTTGATCATCTGCTCATC
AACCTCCTTTGTGCTCATCTTACCACGGAACATGGCAGAGGCGGTGAGGTAACGGCCATG
GCGAGGATCGGCGGCGCACATCATGTTCTTGGCATCCCACATTTGCTGGGTGAGTTCTGG
GACCGTGAGGGCACGGTACTGCTGAGACCCACGGGATGTCAATGGAGCAAAGCCCACCAT
GAAGAAGTGGAGGCGAGGGAAGGGGATAAGGTTCACTGCCAGCTTCCGGAGGTCGGAATT
CAGCTGACCAGGGAACCTCAGGCAGCATGTGACTCCACTCATGGTAGCAGAGATTAGATG
GTTCAAGTCCCCAACTGCACAAAACAAGCAAACATGGAAAATATCACATGGTGTTCTCCA
GAAAACAGATGGGAAATACTAGAGACAATGAAAAGTTAAAGTGGCTTACAGCTAGGTGTG
GTCAGCTTAAGAGTCCTGAAACAGATGTCATAGAGAGCCTCGTTGTCAAGAACCATGCAC
TCATCAGCATTCTCAACCAACTGATGGACTGAGAGAGTTGCATTGTATGGCTCAACCACA
GTGTCAGATACTTTTGGTGAGGGGAACACTGAGAACGTCAGCATCATGCGGTCAGGGTAC
TCCTCCCTGATTTTAGATATCAACAGGGTACCCATGCCAGATCCAGTACCACCACCAAGG
GAGTGGCATACTTGGAATCCTGATAACATAAACATGTTAGGATTAATTATCATCAATACA
TGATAAAATAAAGCACAGACATGGGAAAAATACAGAACAATAAAGCAATTCAGTACACTT
GAAGACTTGCTGAACAGAATACAATATAAGAACACTGTCTTGAATGGGTGGATTGCATCA
TTATACAATCCTTTTTGATCACTAGACTACCTCACAAGAATATTTAGTTATTTACACTGA
TAAAAGGGTAGTTATGGTACTTATTTGGTGGGCCAACAAATCTAAAGGATATATAGCCTG
CACCCTGATATAATGGATATCTAAATGAGTGCTGGACATGTAAATATTCCAAAGGTACAA
GTGGCAGGCCCTCTTCCAGAGTTCACAACCATCACAATACTAATATGGTGCACATTACAT
ATTAAGGAGACACCACATAAGCATACACACTCTCGGAATAAAAAGGATTCTCTCTAGCTA
CCGTCATAATTAAGTAAGTGATGAGCTCATTACCTTGCAGACAGTCACAGTTCTCAGCCT
CCTTCCTCACAACATCCAAAACAGAATCGATAAGCTCAGCACCCTCGGTGTAGTGGCCCT
TGGCCCAGTTGTTACCAGCACCAGATTGCCCAAAGACAAAGTTGTCAGGGCGGAAGATCT
GCCCATAAGGCCCAGTGCGGACACTGTCCATGGTACCCGGCTCAAGGTCCATAAGAACTG
CACGGGGCACAAAGCGACCACAGGAGGCCTCATTGTAGTAGACATTGACACGCTCCAACT
GCAGGTCAGAGGTACCGGTGTAGCGCCCAGTTGGGTCAATGCCATGCTCATCACACACCA
CCTCCCAGAACTTGGCACCGATCTGGTTGCCACATTGCCCACCCTGGATGTGCAGGATCT
CCCTCATCTTCGCCCTGAAAACAGAAGGCAGACGCATGGCCAAATGAATATCAGACATTG
CAACAAGCATGGGAAACTGAGGAATCGATTCACTCAGAGGGCAGTTGCTAAGTTGCTATC
ACAACTGGACCATCTACAAACTAATGAGGCTTATCAATAAGGATAGATCTACGCAAACAA
CACATGGTACTTCAGATCCCAGTTGTGGCAGATGACGAAGAACCCATCTAGATCCAGAGT
GTTAAGGCAAAAATGACACTTAACCTACCGCACACTACGCACTGACAAATCAACTACTAG
TAACTAGTAAAAGCTCAATCGGGTGCCACCAGATCTCGCACACAATGACTCATGAACTAA
ACTAGCACTTCGTCGAGTGGATCCCCAACGATATACTACCGCTAATGATAATCTGATACC
CTGTAACAAAACTAGAGAATATACCACACTACTGCGCCGGGCCTAGATCCAGATCTGTCG
AAATGAAATCCATAGATCCAGACCTTAGAAGCGATTAAACGAAACAAATCAAAGTGTAAC
CTAGATTAGAGGTAACTACAGACTGCAACAACGCATTATGCTGCAGACATCAGCAAAGCC
CTGGCAGATCCTAGCGTTAAACACGCTTCCGCCGCCGAAAAAAATTCAAAAATCAGACCC
AGCAATCGCTCGAATCACCGTGACATTCCAAATCCAGATTTACAGCATCAAAAGTACTAA
GAACAAAGTGCGCGCATGGGAGAGGTAAAGAAAGACTGTGCTTACGAGGTATGAGATGGT
TCGCGCAACGAGAACAGTCGGCGGCGAGAGGGAGAGCGGGGGGAGTAGGAGGGGGTGTGG
TGGCCGGGGAGGAGCGACGCGAGCGCAGTGGGTGTTAAATAGCCGTAGGCGGCGGAGGGG
GGGGCGGCCGGCATCCGACGGCCCACGCGCGCCCCCTCGTCGGGCCCGACGGCCCGGATC
GCTCGACCTTGAGTAAATTTGAAATCTCCCCCCTCGAGGCGGAATGCCCGAACTGCCCCC
CGGGATATTTCGCCACGCTGGCCCTCGTTCGTCGGTGGTCACTCACCGGCCAGCGCTGGA
CGCAGACCAGCCTGCTCACGTGCGTCGCGGATGACAGGCTGGGCATGGGTAAGGCCGGCC
CCGCATGTCGGTAGGGGTGTGGGTGTGGGGATGCGTGGCGAGCCATTACTTGCGCAGGTG
GTCTGGCTGGCCCACGTGGGCTATGGGTCGGGTTCAGATGCGTTCCAGAGCCGCATCGTG
GGGTGGGTGCTGGTTGGTGCGAGGTCCAGTCTCCAAGGCGTCCGCCCTACGGAGAACAGC
TCGGCTGGTGGGACCGCGAGGACAGGGACGTGTGACCGGTTCTCCCCCCC