morexGenes - Barley RNA-seq Database

Contig contig_44964
Source Contig contig_44964
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_44964 (7512 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_44964

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60984	2	2542 bp	MLOC_60984.1	Available	Available	LOC_Os01g04300.1, FRAME:-2, EVALUE:0.0, 13101.m00388 protein glycosyl hydrolase family 10 protein, putative, expressed
CDS Structure of MLOC_60984

Contig Sequence (7512 bp)

>contig_44964 7512 assembly3_WGSMorex_rbca.fasta
GTGTCAGCGTCCCGGTGCACCAAGCACGGTGGCACTTGGAGCACCGCGTCCCGTAGCCAT
ACCCCGATGTCACCCTCCCACACCACTAGCACCTGGATCCTAAGAGGATCTGATGCCGGC
CGTGCCGCGGTCGACGCAGATGCACGCGGAGGAGGTGAGTCGTCGTCGGCGTCAGCTCAC
ACCAGAGCAGCGGCTCAACCCTGTGTACGCGGCTGACTCACCCCACCGGGAGGTATGGTT
CGCGGTCGAGCACGAGGAGCAGCGGCGGCGCGACCTGCAGCTAGGAGGCCCTCCGTCGCC
CCCGCCCATCGTTAGCGACGAGGACCAGGAGGCGGAGGCCGCCTACCAGGCGGCGCTGAT
AGCCGCACTCCGCGAGGGCAAGGAGGAAGAGTGGTGCAAGGTCGAGGAGAAGGACGCGGC
ATACGAGGCGCAGCTCGCGGAGGCCATTGCGATGTCCATCGCGGACGACTGCGTTGTGCC
ACCTCCGCCGAAGACCGAGCCCACGGAGCCGCAACAAAAGGTCTACCAGTGGACCGGCTG
ACTCCGCGAGTGGGTCAGCGCGCCGTCCATCTGGTTGAGGGACACACCGCAGCAGGAGGA
AGCCTACCTCCAGCACTGGAGGTCGCAACACCTGGCAGAGGAACGCGCCGACGGTCGTTG
GCAGATGGCGCTCGAGAAGGAGGCAGAGGAGGAACGACGAGAGATGGAGGAGGAGGAGCG
CGCTCGTGGTGCGCTGCCACTGCTACCAGCACAGCCCACGTCGGCGGGACAGACGATGAA
GGCGCAGGCAGCTGCTCTTTGGAACACGATGTTCCCCTAGGCCGGCCCTACCCGTCGCTG
GTTGACCTCATCGGCCCCGACGTCGCCGCCGCTGCCTAGGGTTGCCTCGTAGTTTAGGTT
TTTTTATGTTTAATTAATGTAATAGGGACGCGTGGACTCTCACTGATCTTCGTGGCCGGA
TTTTAATGTTTAATTAATATTTATTTGTTATTTTTGAAAATGTTTTAAAAAAAATCACTC
GTTAGCAAAAATGAGTTGGGCCAGCGTTGGGCGTTTGAATCGACCCAAACGTCGAAACGG
ATGTTTGTATTCGCCGGACCGACCCAAATGAACAAAAAGCAAACAAAATCATCGTCTGAA
TTGATCGGTTGGAGTTGATCTTAATCACCTCCTGCCAAGGAGCGAGAAGAGACATCGTCG
TTGCAATTTCTAAGAAATAGGAACCCGAAGTTCCATCATCGCCAAGAAAAGGCATCAAGA
AGCCTCTGTTGAAAATCACCATCGCGGCCGGCTGTCGCACTGTCACCAGGCCCAGCGACA
CGGCCACCTTCGAGATGTTTCACCTGTAGGATTATCTTCAATTTTTTCTGTTTCAATAGT
AACGATATAACTTTATTCTTTGACAAATGCTACAACAATCAAATCATTCTAGTTGCAACA
TATGTTTCAGATTTAGAGAAAATATATTTGCAATGGTAGAAATGATTATAATATAATTGT
AATATTTTATATTAATATTTTTCATGTTATTATGTGGATAATTTTGGTAAGTGTAATAGA
AAACTAATGCAACTTGATGATGATTTCTTTGTTGCTGAGACCGTAGTTGTATAGCCTTCC
TTTTTCAATCGTAATCGTTTATTCTTATACTGTGGGTGCATGTATGTTGTATAATTAATA
GTCAAGCTTGGTCAGGGCTACCTGCCTAGTTTGTATTCTGTTTAGTTGTGAATCAAAATT
ACCAGGGCTAGGCTGGGCTGGGTTGGGTGAGTACCATCTTGTATTCGGCTTACGGCCCGA
GTGGCTCGCGGGGACGCGGTGGCTCTACTGCATCCCTTCTCTTGCACCCGTGATTCTCCC
TTTGTCATGCTTTCAACTCTGGACCCCATCTCTATCTTCCCCTCGAGGTTGGGCCGGCTC
CTGGAGGCACCATCCCTGCTGGGGGCGCTAGCAACCACCACGGGAGGGCGAGGGCGAGGA
GACGGATGAATGGTGTAAATCTGAGCTTGTTGTATTGTTTTTGGTTGCTGCTGATAGTGG
TTGGCTCTTCTTAGACTGGGTGTGACTGAAAAAGCGAAGGACGGATGTCGTGGTCATGAA
GCCTGATGCCATGATGATGGATGGACCTGCATGTTGATTATTAGTTAGTTTTTTTTCAAA
ATTGTGAATGAGTAATGGTACCCGTATGAAACGATACAGACTTTTACAAGAAGGTGAGTT
TTCATTGGAGATTAAGGGGGAGGATGGGTCCACCCCATGAAAATCAGGAGAGGAGAGGTT
AGTTAAATTGAAACCATCCTAGTCAGCGTGTAAAAGCTTGTAAACCTTTGTATATTTAGC
ATTATTGATTGTGAATAATAGCAAAGAGGTGGCAGCTTGCTTAGTGTCCGAGTTGTATTG
GAGTAGCAAGTAGCTAGCTCTTAGAGATTAAAATCATGGTATTGTTATCTTAATTATAAT
GCCATACATAATTGTTATGTTCTTCAAATCTCGGGCTATCCAATACATTATGATGCTAAA
CTTTCTAACTAAAATTCCCACGACTTGTTTAAGATTTGGCCTTATTTGTAACGAAATAAG
AGCTTTAAGGTGTTTGTTGCAAAATCTTGGGCCCTTGTTTGTAAGGAAACAAAACGTTTA
GGGTCTATAATGCACGACAATGTTGTGAACTGTTTTAAAATGAGTTGTTCTAAAAAACGT
GAAGAAAAATTCAAAACACGAACGATAGACACTTGAGTTCAGTTTCAGATGCAACGAAGG
TTCGTGGAGGATACCAGTTCAACCCAAAACCCGAACCATAGACACTTCAGTTCAAACACA
TAAATTGCCTTAAAAACTGACATTTTGCCGTGCACCCTCAACAAACATTCGTTGAATGGC
CTTACCCTAGAAATGAAGTGTCGGAAGTGTTGGAAGATTAGGCAAGTTCATAATTAATTT
CACTAAATAATTCATGACTAAAACAGAAAATATCATTCAATACCTAGCAATCCGGCAGAG
CAACTGAACATGCACAACATCACCTCGCAAGAAGCAGTAACTACAACGATCAACATAAAC
AGATTACGAGTAATGTATTGTTCGTTAATTGCAGCAGGAGCGACTGTGTTGACGATGATG
TTGGTGACGATCCTTTGTTGATGGCGATGAAGACGACGATGAGTAGCATCGTCCGACTTG
GATGGTAGATGACCTGCGGTGACGAATTTGAGCAGTCGCGTAAAGTGCTTCCCAAAAAAC
CTAATTCGTCCTCTCTCGGTGCAGGATCGCAAAGACGAACGGTTCCGGTGACCTGCTCTC
TCGCACGCCGATGCACGCTGACGTTCGAGATGAGGTAGACTACGATGGCGGCGCAATTAG
TAAGACGAGGCAAAACCCTAGATGTTTTCGGTGTGTCTTTGGACGACCACAGTAAGCAGT
ATATATAGAAGGACCAAGGTCGGTTCCGTGTCGCGACCACGACTCAAACCAATTTGGTTT
GTAAGTCGTATACTTACCGGACAAAAAAATTTCAACTTGTGTGCCAAGACTTTGTCGTGC
CCCCACAAGGCATCCAACCGGAATTCGGCGGATCATTCACGCGCATGTCACACGTACGCG
CCGCCCGTCAAGGCGAGCGAGCGCGCGTGTAGTTCTCTCGTTTCTCTTCTCAACACACAC
TTAGAGTGGTGGGGAGAACTTAATATATAAAGAGGTCCAACTCTTCCACCACTAGCGGTA
CCGGACTAAACTTTAGCACCACCACACCACCACTTGCCATTTTATTCATGGGCTTAATAT
GAGATTTTGGAATTTGTAGACGAGCCAAACCCATTAATTCTAACAGGAAGCATATCTTTT
TTTTCTCGGAAAGGAGGGAAAGCATACAGTACCATTTTCGATAAAACGAGGATTTACAAT
ATCGTTAATTTTATTCATTCATTTCCATTAATTTTAACCAATACAGTACCTTGATTACAA
TCTCTCAACAGTACAATATATACCAAACGTAGAAACGCAAAACTATACTAGTTGTTGTAG
TATGTGGTACAATCCCTTTGCCGACCCCATTAGATCAAATTAATCAATGTGTGCTTGTAT
GTGTGTAGAGTATTAGTTAGTATACCAAGGAGTATATATAGTATAACTATATATATATAT
ATACTCGGAGATAATAGCCGTAGTAGGTAACCGTTGTCACACGTCCATGTCCAGCACGAG
AGGTGTGTCCCCCTTGTCGACGCTGAAGGCCTTGTGCATCTTCCCCGTGGCCGTGGCGAG
CTGCACGACGTACGAGCCGTGGTACCCTCTGAACTTGAAGTTGCCGTCGCTGTCGATCTT
CCCGCGCGCGTGCGACGTCCACTCCTGCCGCAGGTTGATGAACCTGCATGGACATGATCA
GGACAAGCGTCAGCACCAACACATTTCAATCATATGTATTAACCCGACCCAAAGAATCAA
ATCGAACTAGCAGAGGCCGATCGACCTCTGGCCGGCGTCGTTGATGGTGCCGTCGGCGTT
GACGAGGCAGGCGTCCTGGCGCCACATGTGCCCCTGCATGAACCCCCAGAGCACGACGCC
CTCGACGGCCGGGTGCGCGTACGCCTCCCGGAGCACCACCTCGAGGTCCTCGGCGCGGAG
GCAGACGTCGGACTCGCACACGTCGAGCTCGGTGAGCCAGACGGGCAGGTCGGTGGTGGC
GAGCTTGTCGAGCGCGTCGCAGATGATCTCGCCGGCGGGGTTGGTGACGTGGCCCTGCAG
GCCGATGCCGCCGACGGGGGCGCCCTTCTCCATGAGCGCGTTGACCTGCGCGATGTACTT
GTCCGGGGTGGCGCTGGGGTCGCTGCCGCCCTCGACGTTGTAGTCGTTGACGAAGAGGGC
GGCGCCGGGGTCGATCCTGGCCGTCTCCTTGAACATGAAGGCGTTGATGTCGTCGCCGAG
GCGGTCCTGGAAGAAGGTGCCGTGGAGCATCTCGTTGTTGACGTCGTAGTGCGGGAACCG
GCCGGCGTAGCGGGTGAGGAGGCTGGTGAGGCGGCCCTGGACGGCGGCGGCGAGCTGGTC
GTTGGGCAGGTCCTTGACCCACTTCTGCACCATGCGGTCGACGGCCCAGAAGATGCAGTG
GCCGCGCACCGGCTTGCCGTGCCGGTCGCAGAAGTCGAGCAGCGCGTCGGGGTCGGCGTA
GTTGAGCTGCCCCTGCACCGCCTCCGTGTGGTACCACTTGAGCTCGTTCTCGAACACCGC
CCAGTCGAAGTGCTTGGTGAAGTAGTCCACGAACGCCGGCTCCTGGATCACCGCCGGGTT
GATGCACGCGCCGAACGCGAAGCTCGTGTCCATCTGCATCACCCGGATCGACGCCCCCGA
CACCGCCGACGACGCCCCGGCGCCGGCGAACTTGAGCACCACGTCCCGCCTCCGCACCTA
CGTTCATGCACGGTCCGCATGAGTCGTTGCGTTACTTACGTGTCAAACAAAACACCAGTT
TGGTGCCACCGTAGCTGCCTACGTACATTTATGCGGTTTGGTGGCAGGCTATGCGTACGT
ACGTGTCAACCGAAACCAAGCAGTAAGTCGCTATCAGTTTGGAGTGATAGATGGTGTGAT
GATGGGAGAGGTGACTCACCTTGTCAGTCTTCTTCCTGAGCTTCTTGAAGCGGGCCTTGC
GGTCCGTGGCGAACACCTGGAGATCCATCACCTTGACGTCGACGCCGGGGGGCGCGCCCT
GGACGTGCACCGCGGCGCCGGACGGCGGGATGGCTTTGAGCCGGAACACGCCCTTGATCT
CCGTCCACCTGCCGGCCTCGGCGCACACCGCGCCGCCCTCGACCACCATCGCGCACTCCC
CGCCCTCGCCGCCGTCCAAACGAATGTTGACGCGCACCGCGTGCTCCCCGGCGGCGCCGT
CGCCGAGGCCGATCCACCCGGCCACCCGGTACGTGACCCTGGGCTTGAGCGCGCCGGCGG
GGATGGCCTGGCAGAGGCCGTCCTCCTCGCCGCCGCGGCCCGCCGCCAGAATGTACCTGC
CGCTCGGCCTGTACCCGTCCTCCACGTCGTTGATGGTCTCCGTGGGCACCCTGGCCGACT
CCTCATGGCGCACCGACAGCTCCGTGCACGCGCCTACCGCCGCCCACCCGGCGAGCCCGT
CCTCCAGCGCGCTGTTCCGGATCACGTTGGCGTCGAACTCCACCCCGTGAGCGCAGCTGC
AGGCCATGGAGCTAAGAGGACGAGGAGGAGGCAGGGGAGGAGGAGCGTGCTTGTCGTCGG
TGGCAGGTGGCGCGGTGGTGCGGTGAGATGGGGGAGGGATCGCGGCGGCCGGCGGTATAT
AAAGGGGGGAAGGTCGGCCATCGGGATCACGGCGAAGCAGCTCGAAAGCAGCGCACCGAA
CGGCCGTCGCAAAATATTGCAGAGGCTCGAAGCAACCACCGCACCTCCACAGACCATGCA
TCCTTTTTTTCCCCTTCTGTCTCTCTCTCTCTCCCTGCTTTTGAGTGACAGTAAAGCTTG
CGCAAGGCCTGGCGGTCGCATCGCGCGAACTTGAGGAGACCGGCCGCGACTGGCGTGTGG
GCCCGGGCCGGCGTGTCAGCGGGGCGGCTGTTGGATCTGATAGGCTGTTTTGTTTGTGGT
AAGCATGATGGTGATGATTACAGGCACTACCAGAAGCATGATCGATGGGTCCGTCCATGC
TCCTTTTCTTGGCTTTGGGAGGAAGAGACGAGTAATTTAAAGCGAGCTTGGTGGCCCAAC
ACACATGCAGATTTCATCAGCTCGATCGATCGATCAGGAATTGGACCAATCGGGGCTTAG
ATTCTACATCAACTTTCCGTCGTAATCCCAGGACATTATATCCCTCCCTATTCTAATCTT
AACTGGACTTTGCAGTGCAGCAGCCACCGAAACCGACACCAACACAACACCAACCTCAGT
AACTCAACGCACCGTCAAGCGCCATTTGCCTACGATCAAATTCCCAAGAGTACCGGACCG
GCATTATTATTATATTATTTTAAAAGAAGAGAAGAGCAAGAGGAGGACGACGCTGGCATG
CAACGGAATGCAAGGCAGAGGACCGGGCCGGCGGCAACAACGTTGGACCCGTGCGTACGT
CCATGACGGCGGTGGGATCGAGGAGGATCGGCGAGACGGCGACGCCTCGGCCAACTTGCG
GCCGCCCCACCAACGGGGAAACATGCATGGCGGTCGACGGCGGCCACGACGATGGGCCGT
GGGATTTAGGCTTACGAAATGGGATTACCAAGCTTCAAGACACGAGCATCGCCCGGCTAA
AAGCGAGGTTTGGTGGCCCGTTCCGTTTTCTGTGGCTGTAAATGTCGTGTGTTTACACAG
GCCAATCACGAGCCGAGCCTCTCCACTTACATACATGGATGGATGGGAACGAAATCATTA
GGCTGCTCATAATGGGAAGTAACTAGGAGTAGTAACATAATGTTGTTACTACTCTATGTT
ACTACCTCCATAGTGGGGAGTAACATACATGTGGTGTCATGCAAACTAGCATTTATTAGG
TTATAGACACAT