Map Locations of contig_44937 (5718 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44937

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60954 2 1258 bp AK363696 Available Available None





CDS Structure of MLOC_60954






Contig Sequence (5718 bp)

>contig_44937 5718 assembly3_WGSMorex_rbca.fasta
GGGTCATCCTCCTTTTCTAAAAAATATATATATATGTTTAACCAAAAATAATAAGGGACT
TACATGATAATGATGCCTTTAGTGCCGCCGGTTTGCTCTTCCTCCTCCATAGACAAAAGC
AAATTACAACAGCAGCCAGTATTGCAACGACTATCGGTAGTGCAATGGCTAAAATTCTAA
CAGTTCCATTCCTTGTGCCTCCTGTAAATGAAAGGCGACAGTCAGTACAAGATACATTGA
AGAGGATCCTACAAGACTCTAAGAGATGATGCAACTGCCTTGTTGTCACACATTTTGAAG
ATAATGAAGCTACTATGTTGAAAACTGCAAAGATATCACTGGAGAAAATCCATTAATATC
TTTGATGTCTAGTTGTTTACAGTGCTGAAAGCTTTTATGTCTAGCCTCTTTGAATTCAGA
CATGGACATGGGTAGGAAATCTGAATGTGTTATTTCGCCTGAGTTCCAATGCCAAGGAAT
ATACTCTCTCGAAAACAAAAGGAATAAAAAAATATAGTTGCATTTTTAGTTGTAAACAGC
CATGAAAAGCCTGTGTAATCACTAATGACCCGTCTAAAAAGGAAAAAAAAAAACATGTGC
TCATGCAGAAACACCAGAAGATATTTTGTTCGTCAATATTCCTACTTAGGCTGGTCGTAA
TGGGAATATCATAGGTAGTATCATGCATGCCAACTAGGCAACTTTGATGAGGTGTCATAG
AATTAAATGAGGAAAGAGAGGGTTCAGTATCATGCATATTATGATACCGTATCAGTAATA
GATGATTTGCTACTATGTGTCATGCATGACAATAAATAAACTACCTTAGACTACTGACAT
ATAATATTATGCATTACAGATCTAGTATCATATATTAGTATCATGTATATGATACTAGTA
TATGATACTCTTCGTTACAACCAGCCTTAGACCAAATCGTGGAAGAGTCAGGAGTGCTAT
AAATTCCAACACGGACCCTTTGCAGAAGAGTTTTTATGGCTAGCAATTAGCCAAGCATGC
ACAACTGGCCCGGTCATCACAAGACTTTGAACTCGTATAATTCTCTGTTTTGTCCAGTCA
ATTAACAGATAGCTACGGGACTACACAGAAGTCAAGACCAAACAACAGAAATTTCCAAAG
TTTCCTGTTGCGAGCAATCTTTCCCTCGTTTACTTACTTTGTTAGTTTACCATGGTTTGT
TTTGTCTGAACTATCGTACACACTAATTACTTCCGAATTCTTTACAGAACTATGAAGATT
GGATTGGTTATTTTAGCACAACTGAATCAGACTGTAAAAAAGCCCCTGGCTGGTGTTGAC
AGTCTATAACTATATGCTAGAATCAAATTAAATAATACTAGAACTGTGGTGTGTAAATCC
AAATGGACTCGATCCGTTCCAGCTTGAGTTTCTACTTTTTCCTTTCTTTGCAGATCGAAC
CTCACTGTTTTAACTTCCCAAAAAAAATTAAAACCTCACTGAATAGCTGCACTTTTAGTT
GTAAACAGACATGAAAAGCCTGTGTAATGGGTAATGGTCCGTCAAAAAGGAAAAATTCCA
TGTGCTCATGCACAAACACCAGAAGATATTTTACTTACTTAGAGCAAATCATGGAAGAGT
CAAGAGTGCTATAAATTCCAACACGGACCCTTTGCAGACGAGTTAAGGCTAGCAATCAGC
CAAGGAAATAACTTTCAATGAGAATTCAATGAAATTCATTGAATTTCATTAATTTCAGCA
ATTTCAGTAGCACACAAGAAATAAAAAAAATTCAAAATATTTTTCCAAAATTTCAAATAT
TTAATGAAAATTAAGTGAATATTTCGGCCCTTTGGCCGAAATGCAAACTGAAATAAGGCC
TGGCCAGATCGTCAGAAGACTGAGAACTCATATAATTCTGGTTGTTGTCCAGTAAATTAA
CTGATAGCAACGGGACTACGCAGAAGTCAGGACGGAACAACAGAAACCAATTGCTTCCGA
ATTCTTTACAGAACTTTGAAGATCTTCTGTGAAAAGGCTCCTGGTTGGTGTTGACAGTCT
ATATTTTTATGTTCGAAATCAAATTAAATAGTAAAATTGTGCTGTGTAAATCTAAATGGA
GTCGATCCAGTCCGCAATGAGTTTCTACGTTTTCGTTTCTTGGCAGATCGAACCTCAAAT
GTTTTACCTTTCAAAACAATGAAACCTCACTGTTTTGTCCCTCAAATGTTTTACTTCTGG
TCTAAAGACTGAATCGTACAAATAAGATGGAAGTTATTTCTCCAAGCTCACCTCCTCTGA
CTGGTGGTGGCGTCACGTTGTCCGGCGCTGGAGATGGAGCTTCCCCCACGGATGGTGCCG
GGAGCTGCAGCAGAGAAGGCCCGGTGAAGAAGGGATACTGCTCGTACCTGTAGTTGCACT
GCAATCCAAGAATTCTACCACCCTGCCTCCCGCTTAGGTACTGGGGCATGTCCGCGATGA
TATTTCCGAGGCAGCTCCGGCAATCGGTCGGTGCCATGTCTGGCCTGCACTGCGCCACAC
CGTAAATCTTCGGTTTCCCCTTGTCGATCGTCTCGAACCCCTTCTCCCCTGTGCCGAATC
GCCTGGATGAGTTCGTGGCCGCGTACTCGGCGGTGGCGTTCAGGAGGATACCCACGGCGG
TGTTGAACACCTCCTTCACTGGCTCGGTCACGTTCTGCGTGTTCATCAGTATGAGGGCGT
TGTTGTCGCCGCCGGTGGGGGAGAGGATATTCTTGTTGGAGAAGCCAACGTAGCAGTGGT
CTTCGTAGACGGCGGCGACCTTATTGTAGGGGCAGAGCTGCTGCGCGCCCTTGAAGCCGT
TGGAGACGCAAGTGCCGCAGGTGGAGGCGTTGGCGTCGCCGCGGCAGAGCGCGAGCGCGT
ACACGATGTCCGGAACGGTGCCGATGCTGGCGAACGCGAAGAGCGTCCGCGAGGAGGAGG
CGTTCTTGGGAAGGGTGGTGGAGAGGGCCTGGATGTTAGCCTGGTAAGTGCTGTTCTGGG
TGAACATGCTGGTCTTGTCGTCGCAGTTCTGCCACTGGGATTGGGAAGATGCCAGCGGCG
GGAGGAGGAAGGCAAGGAGGAGGGCAGCGGCGGTGGCGAGGTAGGAGGGGATGCGGCCGC
GGTGGTGCGAGGCCATGGTGTTTGGCCGCTTGGGCGAGCCGACGAGTCGTCAGTAGTGGT
GGAAGATGCGGCAGTGGCTCGACTACAAAGCAAAGCGAAGCAAAGTAGTAGAAGGCTTAT
GCTGAGGGGGGGATACGGGAGGTAGGGTCTGGTGTTGACTCTTGTGGGGCTCGTTTGACT
GGAATACTGTACTGGAGAGTCGTTGATGCTGGTGGTTCTGAAATCGTGGGGCCTCCTATA
AATGCTCGCGGGGCCCAGCCACTCAGCCAGCTTCGGTAGCGGCTAGCGGCTAGCGGCCGT
GTCTGACCCGACGACAGGGGTGGCCGACGCGACATGACCCTGGAGTCGGGAAGAAGAACC
GAAACGACCGGGGGAAGTACTCCACGTGAGTTTACATGGCTCATATCAAACCTTCAATTA
TGTTTTTCCTGGTTTCACAAGAGGAAAAAGATCCAACTATTTCCACATGACAACAAGTGT
CGAGTTAAGGCAGGTTCCCGTCGAACTTGACGGACTTTGTCCTCGCCGTGCGGGTACATG
CACCGGTGCGTTTGGAACCGGAGAAATCCGCACATATTCTTCACCCTCTCTATTTTAATA
TCAATGCATCGTAATTTTATGTTTTGTAAATTCTGTTTTATTTTATACGTAAAACGTGAT
TGTAAAAAAATATAATTAATATAAAAATATTTTATATTACGTAAAATTATGAACATACAA
AAATAGTGTAAAATATATAAAGAATTCATTTTTTTCTGGTATTATGACCTATATTTTTGT
TTTTTCTTTTGTGAAATTTTCTTGCATTTTAGAATCAAATCAGTATATTTGCAATTGTTA
TGATTATGAAAAAATTACAGGCGTTTCTGAAAAAAAGAGCAAGATGCCCGTCCACACTTT
ACAACCGGGGATTACTCCTCATTCCGCATAAAATCAAAGAGACCTACTCGCCACTGCCCA
CCTCGATAGATTCCCTAGTTCGCATTGAGGTCATCGTGCTACCACCTACAATTCACTCTC
CTATAAAATCCTATATGAATGTCGCGTGCTATTGAAGGGGAAGCCTTGTTGAACACATCA
TTATTCCTGTTTCCAAATTTCCTAGGTCACAAAGAGCAACCAATACTTGAAAAAGTCTTA
TACATGTTTCAAGTTAGTGACGGGCATAAATAGGAACCCGCCACTAATATTTTGGAAAAT
TTATTGTGCGGGTAGAAAAATCTACCCGCAATCGGAGATTCCACTACACTGGTGGGCGGT
AATACCCATCCCCACAAATGAACTCTCCCAACTTGGATCGCATGATAAAAGTGAGCAGTG
ACGGGCACACTGGAATACCCACAACTAGTACATTAGGTAGGAGTGGCTGTGAGTATTTAT
GCACGCCACAGATAATTGTCATGAACCTTTTACAAATTTATTATATCCAGAAGTTAGCAG
TAACGGGCAGTACAAAGCGCTCGTCACAAGTTTCTTTGCCCCAAATATTTCCAGTGAAAC
CATAAGTACTAAACCTAGAGTTATCTTAAATTTGAAGGGGAGCAAACATTAAAGTAAATC
ATATTTACTAATCCTAGAATAGCTAGTTTGTCCTCTACTTCGGGGGAGAGTGTCCAATTT
TGTATGGGGAGTGCATCACGTTCTTCCTGTCACACTCTCAGACTTTTACCATCAACAACA
ATAAGCTACCCATCAGGGACGCTCTCCCCCGTTGTCCACGTCATCAGGGAGGACTCCAAC
CAGGAACATCTGGGCAAACGTTGGGACTGTTTTTTCTGCGTTTGTGTGGCTCGCGTTGCT
TCGAAATCAAACTCTGATTGGCTTACTAGAGAAGGCAGAGAGGAAAACCTAGAAACGGAT
CGTCCACCCCCAGCCCACATTACACCGTCCCCATCCCTCGTCTGCCGCCGTCACCACCGC
TGCCACCACTCACTGGCGTCCTCCCCCAGAGCCGTCGCCACCACTCACCAGCGGCCTCCC
TCACAGCCGCCGCTGCTGCGAGCGGCCTCCCCCACAGACTTTGCCCCATCCCTTCTTTCC
TCTCCTTACTTTATCCTCGCCACCAACGACCTCCTCACCTCCCCCTCGCCCCAGATCGGG
CAGCAGGTCCGGATCCATGGTCATGCCGGCGCGAGCTCCTCAATGAGAAGGTTCCAGCCG
CGTGACGAGGGTGGTCACTTCCGATCTGACACTGGTGCCAACGCCATTGACAAGGTCCCT
TCTCCATCACTCTCTCTATTTTCGGTATGTAGTTGGTGCTCTGTTCGTCAAGCTTCCTCT
CTTCTCTTCTAAGGGCGCCGCTTTCCTCGTGCGACTCATCAGATCCAACCTCGCGTGGGC
GCCGGCTATGGATGGAGACGTCGTTGCAGACCACTGGCACTCCGCCGCGGTGTTGAACCT
GTGCAACTGCAACCAACTAGAGTTGTAGCACATCTGCACTGGCACAGTCACCGCCAGCCC
AACGAAGAACTCATGTGTTTAGCTCCACCCACTCCTCTCGATGGCTTCCCTATTGTGACA
TCGTCGACTTTTGCTACAGTAAATATTGTNNNNNNNNNNNNNNNNNNNNNCGCAAATGAT
GCCACATCATCGAGAATT