Map Locations of contig_44892 (8252 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60908 1 1195 bp None Available Available None
MLOC_60907 2 1525 bp AK363473 Available Available None
MLOC_60909 1 1014 bp MLOC_60909.1 Available Available None





CDS Structure of MLOC_60908






CDS Structure of MLOC_60907






CDS Structure of MLOC_60909






Contig Sequence (8252 bp)

>contig_44892 8252 assembly3_WGSMorex_rbca.fasta
ATACGGATCCCTCTTAATAATACGGCGTTCCTACGACTCAAAACCACCAAAGAGAATCGT
AGAAGACACCGTGCTTCTATACCACGGAGGGTGCCGAATCGTCTTGTGACTTTGTCATGT
ATTATATGAAATGCTCAATGCACACGATTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGGCATAAATATGCCCTAACACATGGAATACTAGTATTATCACCAACTTGAG
GTTGTTGTTCCAAATTAGGAAGAGATGCATTCGGTTGCTTTATCACACCCAATGGGTTCT
CAAGTAGTGGAGTTCATGTAGCCAATGCATCCAACCTTATTTTGACAAAGGCCTCAACAG
AATCATCATGCTCCCCCTTTTGCTTACCAAGGGCCCTTTCTAGATCCTGAGAGGTGAAGG
ATTTGTGCACTTCCGAAGAAGTTGGATCTTTCGAAAGTGGGAGTGCAACAAGGGGGTTCC
CATCCTTATCCATCTCGCTCTATGGCGGTTAAGCCAAAATATTACAGAACCGAGATCTGA
TAACAATCAAAAGGATCAACCTGGACCTAGAGGGGGGGGGGTGAATAGGTACAGTTACAA
ATTTTAATAGTTACTTAGCAATTTTAGGCAATAACGCGGAATATGAGAGTGAACCTAACA
ATTGCAAAGGTGATAAGTTTACATGTATAGTGAGCTAGTTAAGCAAATAAATAGATAAAC
AACACAATGTAAAGTATGACAACACGAGTATACAAGTAACCACAAGTAGGGAGCTAGGTT
AGGGATAACCTCAACTCCGAGAGACTAGGATGTATGTCGATGTTCACTTCCTTGGAGGGA
AGCTAGGACACCATTTAGAGATGTGGATGTTACCATGAAGGTACACCAATGCCATGAAGG
CTCACCATATTATCTCCTTGAGAAAACACCACTGTTTCTCAACCACTAGTGGTAGAACTT
GCGGTGATCTCCAAACCCTCACAAAACTTTTAGGGGTAATCACAATGGTTTGATTGCTCT
CCGAAGAACTCCTACCGCATAGGAGTTTCCAGCCTCCAAGAGTAACAAGATCAAGGGACA
CACTCACACCTTTCTCAAATCACGAATTCCTTTAGTTGACTGGAGGGGAGAGAGACGAGC
CATCTATATTGGAGCAACACTCAAGAATCCTCATAAATGCACTTGGGATCTAGGATTTGG
TGTAAGAACAACAGAGTGAGAGAAATATTGTTCTTGAGATCTTTAATTGTGTTGGTCAAC
CCTCACCTGGAGTGGGAAAAGGGTATATGTAGTAGTATTAGTGTAGATATGACCGTTGGA
GACCACTTAAGTTGCGGAGTTACCAGACGTCCAAAGGACACCGGTCGTCCACATCAAAAA
CAAAGATCGGGCATCCAACGAGATTCCCGGTCGTCGGGACACTAGAAAGTGGAGTTGGCA
AGCGAAGGAGCAGAGGAAACATGGGAACCACGGATCGGATGCCCGTAGAACGTCGGACAT
TCGGTGACCGGTCGTTTGGATAGACCAGAAATCCGTTGATTCGGTGCTGGTGTGGGGGCA
ACGGATTTTCAAAGAACACCGGAAATTTGGTTGGCTGTGAGGCGCCACACACCCGGACAA
AACAAAGGCAGAATATGATAGTAAAAGATGGAGACCAAAACCGTGAAGTTTTCGTGAGTT
TTGAGCAAGTCTTTTGCGGGAGCTAGTGAACACCTCTTAATAGTGCGGGATCTCTATACT
CAAGAGTAAACCAAAAAGAGCTAGAACTTTTTTGTCTTGTTTCTCCGTACTTGAGCATTT
TGATTATATTAGTCATGATCCGCACAATAGTCTTTTGAGAACTAGACCTGAGATGCACTT
GACATAAATGGTTAGTTACCTATATGCATGTTGTCGGCAACATCAAAATATGATTAAGGG
AATGATTGCACTTTCAGAGGGTCTCATCTCCTGTGCAGCAATTTTCGGGTGGCCTTTATA
CCAACTTGATACGAAGAATGCCTTCTTGAATGGGAACTTAGTGGAGGAGGTATAAAGGGA
GATTCCACATGGATTCTCGACTTCTGATTCTGTTGGCAAGGTTTGCAAGCTAAGATAAAC
TCTTTATATACTGAAGTAGTCCCCAAGATCTTGGTTTGACAAGTTTAGATGGGCGTTGTG
TGATATGGGGTATGGATAATACTATGGTGCCCCCAAAGGGAAAATAACCATCCTTGTAAT
TTATGTTGATCATATCATTATCACCGATGATGATGACGTGGATATAGTGAGGTTTAAAGG
GTGTCTCAATAAGGCCTTTGAAGTTAAAGATCATTCTTGACTCAAATATTTCCTTCGTAT
AGAAGTGGTCAGGTGTGGAAAAGGAATAGCGCTTTCTCAAATAAACTATACTCTCGACCT
CCTGTGTGCTGTAGGCATGTTAGGTTATCGAGCTCCTTGGACCCTAATTGATCACAATGA
TAAAGTGACGGCTCGATCATGTTGTCTCGTAAATAAATAGAAAATCAATGATTGGTGGGA
AGATTAATGTACTTGTGTCATACATGACCATGCATTGCTTTTGAAGTAAGTGTTGTGAGT
AGATATATGCATGAGCCTAGGAGTGAACATCTTGAGCCAATGTATAGCATATTTAGATAC
TTGAAAGGTTCCCTTGGAAAAGGTCTGATATACGAGAGTCATGAACGCCTTGTCATGGAT
GGTTATTATGATGCAGATTGGTCAGGTAACTGGATAACAGTAGACCAACTTCAGGCCATT
GTGTTTTTGTTGGAGGGAATCTTGTGTCTCGGAGAAGCAAGGAACAACTTATTGTTTCCA
AATCAACCATAGAGGTTGAATATAGAACCATGTATCACGGATTGAAGCAAGTTTTCATGG
ACAAGGAATCTATTAAAATAGCTGAAGATATTGAAGACCACTTGTATGAACGTATGGTAC
GATAACAAGTCGAAACAACCGAGTTCAACATTATAGAACCAAACATGTGGAGATTGGTAG
ATTCTTTACCAATGAAAAACCAGATGTTGGGATTATAAAGATAGAGTAGGTGATCTTAAG
GCAATAGATTACACATTGCTTGATTAAAGGGCCGGGAACGAGAGCATGCAACTTAATGTA
TGACAATATGAGAATGGTGTGAGGGGTCGGGCGGACAAGTATGCCATCAACAGTAGTTGC
CTAACCTTCGTCATCGGATACATGCATAAAGGCTTAACATATTAATGATGGTGACGAGAA
GAAAATCAACCTCGAACAGAAGAAGACCAAACTCGAAGAGAGAAAAGTTAAGCTCGTGGG
CACTTCAAAGGATACTAAAATATTAACCATGAGAATGGGCAAGTTAGATCCTGATGCGAC
GATGATCATGCACGTCATCTGTGTAAGGATGTTGAAGCGCTTGACGGCCACCATGAAGAC
GTATGAAAAGGAGGCCGTTAGTGAGGAGGAGGTGGCGACATAGTGACTCCGGAGGCTCGA
ACAACTGCCCTAGTAGGGCAAAAAATTAGCACGAACTATCGAACTATAACTTTTTTATCA
CACGCATGTAAAAACTACCCAAATGATAACACCTGCACGTATGGCAGGTTTGTACTTCGT
CCTCACGCGTCTATCCACGTTGATTCTGTTTTGCACGAATCTTAAAGGAATCTATTGGAA
TTTTAGTGCCACGTAGGCATCATCGTGTGCGTGGGCGTTGGAGAGTTCGCCTACACGACC
CACAACGCGCGGTTGCCAGCTGCGTCGTGTGGGCGAACCAGTTTCTACCCATACAATCAC
CACCTAGTCCACGCGCGTGTGGGCGAACTGCTCTTCGCCCACACGACGCTCATACGTTGC
TAGATGGCAACTGCAAGTTACGCGTATGTGACAACTTGGTAAACACACATGACAACTACG
ATTCGTTGCTAGATGGCAACTAGAGTTGCGTGTTCGTGGCAACCAGGTAAACACACATGG
CAACTGTGATTATCCACACGTGATAACTATGGTTGGACCACGTGCGGCAAGTAGGTAAAC
ATACATGACAACTATCCCTCGATAACTAAAGTGTCATCCCACGGGTAATTATAGTTAACC
AAAACAGAGAGAGTTGACATGCTTTTACAACTACATTCGCCATCCCGGGTAACTAGATTT
GCCATCCCGAAGGTAACTAAAATGTCATCTCGTGGGTAACTAACGTAGCTGCGTCAAGAT
GTGTGCGCAGATTTGCTTCGTGCCACACGTGCGAGTGAGGATGAATAATGCTTTTTGAAC
GTGTGACACGAAGTAGATGCGTCCACACGTGTGAACAATTTTATTATTCGCCCACCTACA
ATTCATATGAACTGCCTCCTCCGTACACCACACACGTTGTGTGAACGGATGTCTAATATG
TCATACGTGTGGTGAATATCAACACCACAAACTATAAACGAGGTGCTATGAACACCGCAT
TAAATTTGCTCATACACATCCGAAATGAAGGAGCTTGTGTCCTAGCCGATCAGTCCCAGC
ATCCATGATGCTCACACCCACCGCTAAACACTAGAAACACACTGGTTAGTTGCTCGCACG
TGGCATGACATGCCACGCACGTGCGTGGCCCCATGGACCATCACTCCGATCAGAGCCGCG
CCCCTGGCCCTGGCCTCGGGTTGACCAGTTTCTCACCGACTCACCCGAAGAGTCCTCTGC
GAACGGCACCAAAAACTCGCACCAACACAAAACACACTTGTCTACACGCGGACAAACTTG
GGCGACCAACGAAGGACAGCAGCGCTCATCAGCGTCGTTCCCTTCAGACGGCAAAAAAAC
ATGCTACTAGCTGCTGCTACCCAAGCTAGCGCAGCAATTTCCCTCCCTCTTCCTCCCTCC
TCCTCCCCTGCTCTAGCCCGAGGACATAAAAAATATACTACTGAGAAAAAGAATCCCACT
ATCTCATGACATATGGAGGAGAGAGAAGGGGCAGCAATCCCACTACGGTCATCCACAAGA
CATTCCTTCCTCTCCCTCTCTTCCGTGTGCTCGAGACGACATCTAGCAGCTGCTCCTCCC
CGTCCTTCCCTCGCCCCTCCTTCTCTCCTCCTGTTCATAGCGCGGCCGGCGAGGATTTCC
GTCGGCGAGCACGAGAAGCAATTGGGATCGATCCTTGGATGGATGCAGCCCAGTGGCACC
AGGTGAGCTGATGATATTCATACGTGACCCTCCCGAATCCAGGTTACCACGACATCGATG
CTCGACCGCATCTAGGGCCTTGCATGCAAGATCTCTCGCCACGGCTGGCCAGTTGGCTTC
TTCTTGCAGATCTTGTTGCTGTGTTCTTGCCTTCTTGGTCTGACTATTCCTTTTACCATG
CCCTCGATGTTTGCGCTCGCTTTCCTTGATGGGATATGACGATCTTGCGCGCCTTTGCTG
TTCTTGGGAACCGCCATGGCCAACCTTTTGTTTCTGCTGCAGATCTATATGCATGTATGG
CCATGTCTCTCTCTCTCTCTCTCTTCTCTCCCCTTCTCTTCTGTCCGTGTGTTGTCTTCT
CCGTTGGCGTCGAGCTCAGGTCTCGGGGCCTTTAATTCTCCCCTGTCTCCGCTTTTAATC
CTCGAAAGGCGCATACACGGGCACGCACCGCTTTTCTTTGCCTTTGTTCCTGCCTTTCTT
TCTTATCCTTTCCCCTCATCCTTTTCATCTCTCTTTTCTCCTAGCTTTCCCCTTCTCTTT
CCTCCGGCGCCTTGCATCAAAAGAGTAGCCATGTCTTGGATGATGTAGCAGCGACGGTAC
TGCCAAGCCGGCCACAAGCGCAACCCTACAAACAAAGTTGTGTTTTGTGTGGTGGTGGTG
GTGTGTTTCTCTCTCATCTTTTCGTTTCCTTTTTTCCCCACCTTTTTCATTCTCCTTTTC
CCCGCCCTTTAATCTCACTTTGTATCCATTTGCTTGGTTCTTTGTTGCACCATAAGAATC
CTCTCACCTCAGGCTCTCAGTGTCATATCCCCCCATCCATTCCTCTCTCTACAGCATGTT
CTTGGCCTATTACTAGTTCTTATTACTACTTGCGTTAACATTTGACGATTCGGCTTTGTG
ACATCTAATGAAGTGCAATATGTGTCCATCACCAGGGGCTAGGGCTCGTGAAGCCCATGG
AGGAGATGATCATGGCTGGAAACCCAAATCCTAATCCTAATGGGAACCCGAGCCCACAGC
CGGCGCCGCCGTCTGGCGCCGAAGCCCAGAGGGCTCCCCTCCCTGGCCAGCCGGCAGCAG
GAGCGGGCGCGGCGGCCGGGACGGGCTCCACCGAGCGGAAGGCGGCGCGGCCGCAGAAGG
AGAAGGCAATCAACTGCCCGAGGTGCAACTCTACCAACACCAAGTTCTGCTACTACAACA
ACTACAGCCTCCAGCAGCCGCGCTACTTCTGCAAGACGTGCCGCCGCTACTGGACCGAGG
GCGGCTCGCTCCGCAACGTGCCCGTCGGCGGCGGCTCACGGAAGAACAAGAGATCGTCGT
CCTCGGTGGTGTCGTCCGCGGCGGGCGCCGTCTCTACATCCGGGGCGGCGTCTGGGACGG
TCCCCGTCGGCGGGATGCCGGCCAAGAACCCGAAGCTGATGCACGAGGGCGCGCACGACC
TCAACCTGGCGTTCCCGCACCACCACGGCCGCGTCTTGCACCCGTCCGAGTTCGCGGCGT
TCCCTAGCCTGGAGAGCAGCAGCGTCTGCAACCCGGGAGGCGCCATGGCGGCCAATGGCG
TGGGCGGTGGGAGGGGCATGGGCACGTTTTCAGCGATGGAGCTGCTGAGGAGCACCGGCT
GCTACGTACCGCTGCCGCAGGTGCAGCTCGGGATGCCGCCGGAGTACGCAGCCGCGGGGT
TTGCGCTTGGCGAGTTCCGCATGCCCCTGCAGCATCAGCAGCAACATCACCAGCAGCAGC
AGCAGCAGCAGCAACAACATCACCAGCATCAGCATCAGCAACACCAGCAGCAGCAGCAGC
AGCAGCAGGTTCAGAACATGCTCGGGTTCTCGCTGGACACGGGAGGAGGTGGCGACGGCG
GGGGATACGGCGGCGGGTTGCAGGGGGCGCAGGAGAGCGCAACGGGAAGGATGCTGTTCC
CCTTTGAGGACTTGAAGCCGGGGGCTAACGCAGCTGGAGGTGGTGGTGCAAGTGGCGGTG
ATCAGTTTGAGCACAGCAAAGAGCAAGGCGGCGGCGGTGGCCATGAGACCCTGGGGTTCT
GGAATAACAGCATGATCGGGAACGGCAGCAGCAATGACGCCGGCGGTGGCGGTGGCGGCG
GCTCGTGGTAGGATGGCGACAGCATGCATGGCTCATGCACACGCGGTTGTCAGCATGTGG
AGATGATAGGGATAGAGACAAGCGGGTTAATAAGCGGTGGTGGTGATTAGTGTTACATAT
GGCGTTTGATCCTTCTTTTGATTGCGTTTGGTTTTTCTACTGTTCTTGGCCTTCCTTCCT
TAATTTCTTGGTGTTTGTTCATGTGTGTGGTGACGATCAACTTGGGGGTCTAACACAGCT
GAGTACACAGATTAAGTAAGGTGTGTTGAACTAGTGATTATACGGCTTCTACTATTTATC
TTCTGCAACTGAATCTCTCATCTCTGATCACCATGACAATTTCATATGAAGTTGTTCATG
TAGATGCACCATTTTTTTTTACCACATGGTTCGAGTCGAACATCGACTAGATTGGCATTG
TCAGACTCTTCTTTTGTCTTTAGGTTTTGCATGCATGCATCGGACCGTGCAGTATGTGGG
TGAATGGATGTTGTGAAGGTTCATTCAATTTCAGTGCAAGATTGGCATCATCACTCGTCA
GTCAGTCAACACTCAACACATTGCTCTACAGTCAGTTTGACACACTGTGCAGGCTGCAGG
ATCCTATATCGATCGGTTTGCTGTACTGATCTAGAGGGCTACCTAGTAGCAGGCGTGTTT
TCATGATCCACGGCTTTAGAACAACTTGTAATGTGTATTTTATTGCCGTTTATATTATAT
ACAAAATACATTAATATATAGACATATTTCCCTCATCATTCGCAATATGTATTTTTTTTA
CCCTGCATGCCTGTCAACACATATCTGCCCTCTCCTTGTGTGCTCTTTTCTTGTAGCAGG
CAGGCTAGCTCTGAGATGTCGTATCTCGCCATCATCCCAAAACCAAGAATCTTCCAGCCA
TGAAAAGCACTAGCGGTAGGAGGAGAAAAGCAGCGGAATGGAGGAGAGAATATGTATGTA
TGACAAGCACCCTTACCCCCCCCCCCCCCCCC