Contig Data
morexGenes
Links



Map Locations of contig_44889 (6161 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44889

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60905 1 632 bp MLOC_60905.1 Available Available None
MLOC_60906 1 700 bp AK376745 Not available Available None





CDS Structure of MLOC_60905






CDS Structure of MLOC_60906






Contig Sequence (6161 bp)

>contig_44889 6161 assembly3_WGSMorex_rbca.fasta
TATTACACATGACTTGAGGTGCAAGGAAAGTAAANNNNNNNNNNNNNNNNNNNNNNNNNT
AATACTAATACTTCCTAACAGTAGGTAGTCTTAATGTGTTAAATGACAGAAGTTAAATAA
ATCAGAACTCACAGTTGTAATATGGAGTGAAACAAATGTTCTAACAAGGGGATACCAGGA
CTGCACCATAGCCTTGTTTACCGAAAGCATATGCATGCCTATGTGTTAGGTTGTCAAAGT
AGTTGTAAGGACATAAGCTATCACACACATGTATCTGAACAATGGTGCTGTCTGTTTCAC
CCCAAAGTGAAGAAACATGAATTTGATTCCTCTGGTTGCCTGACATTGAACCTTTCCATT
AAGTACTCCAATCGCTTTCAGTCACTTTCAACAAGGAAAAAAACTGCTTTGTAATTTTTT
CTATGTGCGCTTTTATATGATTCTGCCATCTGAAGCTTAAACGTCTCGACTAAAGAGAAC
TAACATCTGTATGACATAAAAAAGAGTTTCACTTGTCAACATATCTCATCTGTGATCATC
AATGCCTTGCATGCATTCCAACATAGCATAGCATTTGCACCTGAAATGCACAGTTATTTT
TTCCCCAGAAAATATGCAGTAACTGGCAGACAATCTGATCTTCGTATATTTATTTACCTC
TGCTGGAACAATACTTTCCTGCTGAACATGCAATCAATCTCTTGAAAGTTACTGAATGTG
TTTATATTTCAGTGTTGCTGCAACATTATGTTTTTCGCTTTGGTCTGAATACCAAATATT
GGGTTGTACTCCCTCCGTTCCTAAATATAAGCCCTTTTAGAGATTTCAATATGGACTACA
TGGGAAGCAAAATAAGTGAATCTACACTCTAAATATGTCTATATACATCTGTATGTAGTT
CATATTGAAATCTGTAAAAAGACTTGTATTTAGAAATGGAGAGAATAGAAGCTTGGTGAT
TGTTTGGAGCTTTTGAGATTAATATGTTGAGCAAAACTGGTATAGGTCAAAGAATTTTTC
TCCTTGGACAACAACGGCACGAACGTAGAAGTACGCTTGGTAAACCAGCACTTGATGAAG
GCTCTGGAGCAGTCTACCTTCAGAGTTTTGAACGTCACTCACATGAGCGAATTCAGAGCT
GACGCTCATCCGGCGACAACAGGAGGAAAGAAGCACGACGACTGCATGCATTGGTGTTTA
CCAGGACCAACCGATGTATGGAACGATTTGCTAGCCTCAAGTCTTTCGGCAATTTAGAGA
TAGCCTTGTGAAAAAATTTCCCCAACTTTTTTTCTTGGGGTATGAATACGATGGAGCATT
ATTCGTTGGCACAGAAGAGATTTCCTCCGAATACCAAACTGTAGATTTAACCAAATATTA
GAGTTTTATCGATTTGTACTCTTGAATCCTAGAATAGCTTAACTGGATTTGTTTGTTGGA
CGATCAAACAGAGTAAAGTTTTCTCGCACAGACTTATCTTTCCATGCCACACCGACACTG
AAAGGGGCACTGCATTATTTTGCGAAAATATATTTGCAAGATCTAACTGGAAAGTACTCC
ATGTTGTCGTGGCTGTACAAATACTGACTTTTAATGTCATGTCAATGTTTTTGTGCATTT
GCTACATGTCAGGCATCAAGTCACTTCTTCTGCTTCGTACGAGGCTGAAGGTGGGGACGA
TGTAAGGAGCGCCGGCCATGGCGAGCTCGAGCCGTGCACCGGCAAGAGTGAGTCAGGAAC
TTGACAGATCAGGGGCTTTGAGGGATGTCCATGATGATGGAGGAAGGTTAAGGAAGGGTG
GGGCGGTGCGCGGTAGCGCCTGTCGGCCGCAGGGTGCGGAGGCAGATCGTTAGGACTGGA
CAGGTCGTGGGGAGGAGCAACCGTCGCCGGCGGTGGAGAAAAAAAACATAAAACGTGGCT
GCGCGATCGGTGATGTTTTCTTTTGAGGGTACGATCGATGATGATTCAATAGCCCGAAAA
ACTGAGTGCAATTTCGTTTTTTCCAGGTACCTGACATATAGGTGCTGCCATATTTTTTGG
GATGCTTGCATGATCCCCTACCCTTTTTACCCGGTTCGTCGGTCAAACTGTTACTCCGGA
CGCATGCGGGCCGTGGGATTCATCGTCATCCATCGCACATCCCTCCCCTTCCTCCTCCAC
GTGCAGCCCTCCCAGCGCATGTCATGGCATCGTCGCAGCTCTGACCACCCGTGCATAATG
ACAGCATCACAGATCCTTCACCCAACCCGCATATGAAAAGTGAACCTCGAGACAAGGGTC
GATTCGTTGTTGGCCTGGTTTTTCACGGCACAAAACTCCATCACAGCAAGAACAAGATGC
AGGTTTACGAAGATGTTCGCAAAATCTCACAAAAACAACACGCCAACCCCTCGATCGGAA
GGAATAACATGGACGAACTGTATAGGCTCAGCATGTAATCTCTGACGCGTCGCGTCGTAT
AAACTCACACGTCAATAGAGAATTTTGAACAAGGTTTTTCTAAACTCAATAATGACCGAT
GACCGAAACACACGCGGTGTCTAATTCATCTTAAAAATAACCTTCTTTACATGGTGCACC
GGTCAAAACATAAATACTAGATAACCTATCTTGACCAGCAAGTTGGCCGACTCAAACTTT
TCTATCTATATCTTTCAACTAAAAGGAAATAAAATCTAAGCTGGACTCTCTAAAATAAAT
AGATGACACGCCTTATAGTTTGACTCGTAATCTGTATATAGATCTGAAAACAAACCTGTG
ATAATATAATCCTGCATAATCGGTGCTTAGCAGGTGAGGTCCAGTGGCGGACCTAAAGAG
TATTTTAAGTGGGGGCATGTTCTTCAAAAAGTCAACGAATTTAAGCATATTTTTTAAAAA
CTACAAACAAAAACACCGCAAAAAAAAACCACAAACAAATATTGCTGGAGTTTCAAAATT
TGAGTGGGGCCTGAGCCGGCCCCACTCACCACAATGTAGGTCCGCCCCTCACCCTATAGC
ACATAAACACATCAAATCCTTTGGTCGTGGTCTTCGAGTTAGCACATGTAGCTCATGAGG
TCGTGCGCGTGAAAATTAGTTGCAACCATGGACACCTTTTTGATTCGTATCTCCTTTGCC
GTGTACACATATACGTTCATGTTTCTCTTTAAATGGATCCATGCAATCTGATGACCGAGC
CCTTCCAAAAAAATAGCCAAATTAATCTTCCCTGAACGTAACCAAGATGATATCATGTGT
TGGCATGTACGAGACTTGATTCTCATGCTCAATTAATAGACAAATATTAGATCTTTTAAA
TCTTGGAAACCAATCAGCTATGGAAATATTGGTGCATGCCATCTGGACACCTTCCAATTC
TCTTCCTTTTTCACGTTGCACCATATTATGCTCTAGCTTGCCTTCCCTTGCCTTTTTATG
TGTGACTACCACGTTGTCTTTTTATTACAATCGGTGTTTCATTTTATTACAACCAACAAC
ATGGCGAGCTGCATCCCCTCTCTCTATCTCATCTGCTCCATGGCGAACGAAGCTACAACG
GGTATGACCGGCGAAGTTATGTCCATGACCTAAGACGTAATTTGCTACATGCTTCAACCG
GCATCGAAATTTGCTATAACCGGCACCGCATTTTGCTACCACCACTGTCGCATTTTGCTA
CATCGCACGTGGCGTCGCAATTTTTTGCTAAAACCGGTGTTTCATTTTGCTACAACCGAC
GACATGGCTAGCTGCATCCCCTCTCTCAACTGCTCCATGGCGAGCAGAGGAGAGCTTCAA
GGCCCGCGAAGAGCTCATCCATGGTGGGGGAGGGGCGGGGTCAGCGGGGGTCCCGTGATC
GTGCTGCGGTGATGGTGGGCAGCCGCCTTTACCTACGGTGTTTCTTCAGATCTGAACGCG
AACGGATGAGAAGAAAGAAAATGACGTGGATGGATGAGAATCTAACGGCTCGGGTGGGCT
AATCAGACGACTGGGGCGCGACCGGCCGAAACTTTTTGGCCGGCACGTCGGTGCCTATCA
GTCCCCCACCGTGAAGCTCACGCAAATTTTCCTTTCCCTTTTGTAAGTACAACTAGTCCA
GATTTGGACGGCTGGGGCTCGACCGGCCGAAACTTTTTGAACGGCACGCCGACGCCTATC
AGTCCCCCATCGTGAAGCTCAGGCAAATTTTCCTTTCCCTTTTGTAAGTACAACTAGTAG
GAGAAGACTAAACGGATGAGCGAAATAAGTGGAGGGGCGACTGGGAAGGCGATCCCGGTG
ATCGCCACGACAACCGACACTGCTCCAGGCCTCGATGCGAGAGCCAGACTGAGGGGACGA
TTCTGTGTGTTGGCTGAGAGCGACGAGGAGGAGGATGAAGACGTGATAGCCGTCGGAGGT
AAGTCGGCTTACATATTGCATCTCCCACTCCTTCTGACTATATTTGCGAGGCATTTTAGG
TGGGATACTCGAAGGAGGAGGTCGCCGACATGGTGGACGTGGTGGTTCAAAAGGACAATC
CAGCGAGGCTGGGGCTTGTGTCCGATGACAAGGTCGAGGTGGCGAGGCGGCTGGTTCATC
GCTGGACGGCGGCGACAACAATCCGGCCATGGCATGGGCCTCTTCCCAAGGTACGACTAT
CGAAGTTGACTTTGTCAGATTTCTTGTGTCCTTCTTCGTGGCAAGTTGTCCGGAACAAGA
AACACCGGCGACGGCCGGCGGCAGCTGCGGCACCAGCGAGACCGATCGCTGAGATCAGAT
CAAGCCGTGTGAAAAAGCTCTTGGGCCTAGATGGGCCAGATCAGATCGTGTCAGTGGTGG
GCTTCGAGGGGGCTGGGTATGTGGCCCAGCCTGGAGCCCAAGCTGGTCACAGTCTCGATC
TCTCAAAGCAGGCATCGAGTAGTTCAATTGCACCGAGTCCTCTTGTTGCGTTTGAGGCTG
TGTCTAGTGTTCCCAGGCGTAATTGTCCTGGGTTTCCTGCTGCGCAGGCGGGCAGGGCGA
CGAGAGTCCGGCCGCCTCCTTTGTCAGCGACGGCCATGGCCGGCCGCGACAACCAGCAGC
CGCCGCAAAAACCGAACCAGGCAGGGGCTGAGACGGGAGGAGGTGCAGGTCGTGGACTGC
AGAACGATGGACAAACAGGTGCTCGGGGCCCCGGTGACTTCGGCGGAGGCGGCCGGGGTG
ACTTTGGCGGCAAAGGACAAGGCGATTTTGGTGGCGGTGGGCGAAACTTTCAAACGCATA
TCGATGGTTGAAACTTCGCTCGCGTTCGCTGGGGTGATGATGGCTATGGTGCCTATGGAG
ATGGGACTCATCGCAGATCTTCCTCTACCGGCGGTGGTCGTGGGGATGGAGGAGGCCAGG
GCTTCGACGCTCCTCCGGGTCCTTTCATCGAGGGAGCAACGGGGCCGCTGAATCGGAACA
GGCAACCCTTCCGGTTGAATCATGGCGGGCGGGGAGGTGGAAGAAGACCACAATGGCGTC
GGGACCCAATCACGCATGACCCACCTCCACCTTTGGGGCGTGTGGAGGTGGGTGCACAGC
TGGCACATGTTGCTGATGGTGCAGCTGCTGCTCCTGCACCACTTTCGGGCGAGGCATTGG
AAGCAGTCCGGGCTCTTGCCAAGGTCCGTGTGCCTGATGCCAAGACGACTGCTTTTCGGA
ATATAGGTTCTGATAAATCAAGTGACAAATCTGATGGGGAGAGAGTCACGAAATGGGCTA
AGAAGAAAGAAAAGATGACGTGTTACTGCTGTGGTGGACCGGGGCATTTTGTGGCTGAGT
GTTCTGTAGAGCTTTGTGACATATGCCGTAAGCCGAAACACAAAAAGGGAGAGTGCCGCT
TGCTCCTTAGGCCGAAGCTAGTGATCACTATGTATGGGGCTTGCTGTCTGGAACTTATGT
TCTTCGAGTCTCCGCGCTCGTCTTCGACCATGCCGTCTACGAAGACTTCACGCACGGTGG
TTGTGAGGGTTGATACATCCCAAACGTATCTATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATGTTTTGCTACACTTTTATATCTTTGTACACATATTTGGACTAAC
CTACCAACTCAGTGCACCCAGTGNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGCAAGGAC
TTTTACCCAAATTTCCAGAGCTCCAAAAATCCCGAGAAAAA