Map Locations of contig_44827 (9559 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_44827

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_60832 3 1797 bp MLOC_60832.2 Available Available LOC_Os01g01080.1, FRAME:-2, EVALUE:0.0, 13101.m00015 protein decarboxylase, putative, expressed
MLOC_60830 1 539 bp None Available Available None
MLOC_60831 1 1064 bp None Available Available None





CDS Structure of MLOC_60832






CDS Structure of MLOC_60830






CDS Structure of MLOC_60831






Contig Sequence (9559 bp)

>contig_44827 9559 assembly3_WGSMorex_rbca.fasta
TTTTTAGTTTTATAGAAAATAAACAAAAATGATAAAATCTTTAAAAAAACAAAATCCTTT
GAGATGTAGTTAGGTTTTACTGTCTAGTTGGTATAGAAATTTTGAGATAAGAATTTTGAC
GTTTTTGCAAAAAAAGGAAAAAAATGTAAAACGGCCATAACTTTTGCATATGATGTCCAA
AAAAAAGTTTAATAAATTTTAAAAAAAACTAGAGAAAAATTGGGACTTGATTTCACCGGG
GCTTGTCCGGTGAAGTTTTCTGAGATGCTCAAAATTCCAAATGGAAAAAAAGTTATTTCC
AAAAGAAGTTTTTTTCCAAAAAAAATAAGAAAAAATAATTTTATTTAAAAATATTAGGTT
GTTTTCATTAAAATTCACTATTATTGTTACTTATTAGGTTTATTTTATTAATTGTTTGTA
ATTCAAAAAATCAAATCATGTGACATGACATCAAGACCCAGGTTGTTTAGGATTGATACC
TTACTAGTGTTTGGAAAACAACAAGTGCACGGGTGATAGAGCCAGAAAGTTAAGCGTGCT
CGGGCTGAAGCAGTGAGAGGATGGGTGACCGGCCAGGAAGTTAGACGATTTGGAATGAGG
ATCCATGCTAGAGAAGTGAGGATGAGTGATTAGAGATTAAATTGTCAAATAATTCAAAGA
TTTAAAAATTGGATTTAAATAGAACATAAAAACAAATCAAAAAATATTCAAAATAAAAAT
TAAAAAAATTCTACCTTTTTCGGGTTAAACAGACGGATCCTTTAGTCCCGGTTCGTAACT
AGAACCGGGACTAAAGGTCTTCCCTCTCCCTCGCTCCCAGCCCCGCCACGTGGACGGCCA
TTAGCATCGGTTCAGGGTCAAACCGGGGCTAAAGGCCCTTTTTCTACTAGTGCATATGAC
AACTTTGTTTTTTTGTTTTCAAACACAATACGCACGCAATCATTTATATGTACGCGCATA
CATTCATCTCTATAAATACACACATATATCCTACCTTATGAGTACCTCTAGAGATCGAGT
TTGTGTTAGTGCGGACGCTAGTCATATCATGAAAGCTGACCACAACAGAACATGCATCGA
ACATGTGCATGTTTTTGACACTGGACTTCTTGTAGTAGCACACCCACACTAGTTATTGCC
GGTAGATCGCCGGGGCGACGCACGAACGTAGAGCGGGCCGTCCATTTTGAGCGTGAGCAT
CGGGCGGTACCCCACCGTGGAGTCGCGCTCCCACTTCTCAAACCTGAAGTGGTGGAGAAG
AACTGCCGCAAATATCTTCATCTGCGTGTACGCGAACTCCTTTCCCAAGCAGATCCGTGG
CCCCGCCTGCCAGGTTCAACAGGAGGGCAAACATATGTACACATCACATGAACATACATG
GGAATTCTGGATCACATACACACGTACTTGACATACTCCTACTTGTTTGTCGACTCCTGC
GTGATGATTTATTGGTTAGTTACCTGGAAAGCCGTGAACTTGTAGGGGCTCTCGGGGACG
AACACGCCGTCGTCGTCGAGCCACCGCTCCGGCCTGAACTCCTCGGCGTCGTCGCCCCAC
AGGAACTTCATCCGGCCCATCGCGTACGGCTGGTAGTTCACCATGTCCCCTCTCCTCACG
GCGTGCCCGTCCGGCAGCGTGTCATCCGAGAAGCAGCACTTGACGTCCTACAAGCAATGC
AACAACACCCAAATCAATGGTGTACCTGATCATTTCACTAGACGTGAAAATGCTCCATGC
GGATGAACTCACGACGGGCACCGCCGGGTAGAGCCGGAGGGTCTCCGTGAGCGCGGCGTG
GAGGTACTGCATGCTGCCGATGGCGTCTTCGGTCAGGCACGCCGTGAACTCCCGTGCGCC
GCCGCCCGCGTCCCGGCGGCGATCGCCGGTGGTGGCCTCCCGCACCTCCCTCGCGATCTT
GTCCTGGATGCGCTGGTTGCCGCACAGCACGTAGAGGAACCACGACAGCGTCCCCGCCGT
GGTGTCGCGGCCGGCGATGACGAAGTTGAGTATGATGTCCCGCAGGTACTTGTTGTCGAC
GCAGCCGGGGTCGTCTTTCTCCCTCTCCACCAGGAACCTCGACAGTATGTCCCCTTTCTT
AGCCTGCAAAAATGGAGAAATGTCACATATTTTCTTTCTGTCCAGCAGGAATCTCGACAG
CAGTATGTTGCCTACGTACGAATTCGTGCCCATCTCTGCCCATCTGCTCGATCTTCCTGT
CGATGACGGCGTACACGAAGTCATTGATGGTGCGCACCGACCGCTTCATGGCCGCCTCCG
ACAAGACGCCGAGGAGCCTCTTGGCCTTCCAGAGCGGGTCCAGGAACCGGTACAGCACCT
GCTCGCTGGCGTCCTCGAACGCCCTGGCGAACGCCGCGCCCTCCTGGTTGGAGTTGGAAA
GAGCGCCCAGCTTGACCCCGAACCCAATGGTGAAGATGGAGTCCAGCGTCGACCGCATGA
ACAGGTTCTCCATGTCCACCCTCTCCCCGGCGTCGGCGGCGGCGGCCACCATGCCCGCGA
GCTCGGCGGCCACGTCGCGGAACACGCCGCTGCTGTAGTCGCGGAGCACCCGGGTGGTGA
ACTCGAAGCTGGCGACCTTACGCTGGTGGCGCCACTTGGCGCCGTCGACGTTGAAGATCC
CGTCGCCGAGGAGGTCCTCCAGCACGCCGTGGGCCATCGCCCCCTTGCCGTAGTTGGCGA
AGTTGGCCCGGAGGATGTGCTCCACGTTGGCCGGGTCGACGGTGTACACCCAGTTGCAGG
TCGGGGTGAGCATGCGGAAGGTGCGATGCCTGCGGGAGAGCTCCGTCATGTACTCCGGCA
GGCGGCCCCAGTTGAGCAGCTGCTGGAGCATCGCGCCGGCCACGGGCGGGTAGCTCCGGC
GCCGGCTCTTGCCGCCGAGCAGGTACAGGGACAGGGCTAGGAGGAGCAGCGCGGCCAGCA
GCAGCGGTGAATCCATGGCCGTCAAACGGCGGTGGGTCACGTATGGTGCTGGACTGCGCC
GTGTGTGTGTGTGTGGATTGAGGAAGGCATGATATTATTCTTCCCGCTATTTTAACGAGC
ACTTGACACCTGGCTGTGTCCGTTTTCTCATTTTCAACACACCATCACTACCACAATAAG
GCCCAGTTCCATAATCTTAAGAATCCATCCACCCAGCTTCTTTCAAAATCTTAAACACTT
TTGATGTAGTTTCTTGTACCTTTGTGTTTTCTGAGGCAACTTCCCTTAGTATCTCAACAG
TCAACACCTTTTCTTTCCACGTTGGCTGTATGTACATTGTTTGCTGCAAAACTAAATACA
ACTGTGCCTTGACCAGGGCGCTTTAGGCCCTGTTTGATAACAAAGTAGTAAAAAAACTAA
AGTATTAAAAACTGTAGTAATTTTACGTGTAGATAGAAAATACCATGGTTTTAATATAAC
AACATTTTTTACAGTATTCACAATGTAGAGAAACTGTTTGATTACGCCACATATTACTGC
AGTTTAGATCGAGCAAGTACACGGGAAGAAGATAACGACGTCCCACCCCTTTTTTTCGCC
TTCTCTGTTTTTTTAAAAAGAGGTCTGGGTTCTTTTTCTTATGCAGAGAAAAAACCACAG
TTTTTTCAATACTGCAGTTTTAAAATCACAATTCTTAGAGGCAACCAAACAATACATCTT
TTTTTTTCCTTTCTCGAACCTATGGTTCTTGAGTTCAGTCATAAAAAGGGGGGGAAGCTA
TGCTTTCTTAAATCTTTTCAATCAACCATCCAGTTGCAGTTATTGACCTAACTAAAGCAC
AGACTATTTATTTTATTTTATGCCCAGATACGATCCAAGGGAGGGGATGAAGTTTCGAAA
GGTTCACCTGTGAATGGCTTGATGGATCGCATCAAGTTAAAGACCTTTGCTGCTTTGACA
ATGGATGTTGCATCAGCTTCCCCTGGACGGTATTTCTATGAGGCAAGAGCAATTACCCCG
AATGCTTCATCTCATACGCCTCTTTTCTAGTTTGACATCTTATCGGCGCCACCGATATCC
CGATATTGGTTTCTAGAGATCATGAGCTATTTTGCAGCATCTCAACATGAAAGGGAAAGG
CTTCATTGTTTTGCAACAACTGAAGATGAAAAGGACAGGCTTCAGAACAAAAGGCTTCAG
AAGGAAAGGCTCGAGGAGTTTGCTTCTCTTGAAGGAACAGGCGCCCTTTACCAGTAGAAT
CACAAGGAGGGTCGAACTGTTCTAGAAGTAAGTGTTGTCTGTACTGAAGGTCTCCTTTAC
AACGCCTTGCGGTACTTAGGATGTGAAAGTTATATAGCAATAGGGTATTGTCTTTGGGAT
TTATTTTTCATGGCTGAATAGTGAGATATGCTTTGTAAGGTGCTGGAGGACTTTCCCTGG
GTGCACATGCCTTTTGAACGGCTGGTGCGACTGGCGCCGCCATTGAAGGAAAGAGCATTT
TCGATATCGTCGTCCCCATTGGCACATCCAAAACAGATACACTCGACTGTTAGTGTTGTA
TCATGGCTTGCTACTCCTTTCAGGAGAAAGCATGCATGGTCTCTGCTCCACATGGCTGGC
AGGACTCTATCCAAAACGAAGGTATGCATTGCTTCTTACAGGTACTCTTGCTTTTAACCT
AAATCACCTCGCGAAAGAAAACCATAAGCCCTCGTCATGCTTACGTGCAGAAACTCTTGT
ACAATGTTGGAAACACCGATGATCCCTGCCTCCTCCACATCCGTCGATTCCTCTCGTTCT
TATTGGACCAGGAACAGGATGTGCCCCATTCCGAGCATTGGTGGAGGAGAGGGCTGTGCA
GAGGGCGAGAGAACCCACAGCTCCGATCCTATTCTTCTTTCGCTGTAGAATCGAAGACGA
TGATTTTCTATACAATGACTTTTGGTCACACCATGCCCAGGACAACAGAGTGCTGTCCCT
GAAAGAGGGCGGCGGTTTCTTTGTCGCCTTCTCTAGGGATCAGCCTGAGAAAGGTGTATG
TGCAACACAAGATCAGGGAGCAGAGTGCAAGGGTGCTGGACATGTTATGCTCTGGTGTTA
GAGCTGTGCTGGAAGAAGTTGTCTGCGAAAGGGTGGCGATGCAGGATGGCTCAGCAAACT
GGGAAGGGTTGGTAAATATAACATCGAAACTTGGTCGTAATTGTGATTGTCCGGCAGGGC
AAGCAGTATATAGGAGCAATAGGCTGAAAATGTAACTTTATTGAACCCATTTAGCTGATA
CATAGATACATGTCTATATTGTAGGCAATGTGTGCCTTCAGTTTTGCAGCCAAACTAAAT
ACGTAAGATCACACAACACTGTCACTGCGGGTTGTACATACATGGTACAGAGAGATAACC
AATGGGGTATAGTCAATGGTTAGCAAGAGCTGTCCATGAACTCTACAAGTAACTCCTTGA
CCGTGCCTCTGTCTGGCATCTTCCCAGCCGCGCCGTAGATCGGAGCCATCCCCCCGCTGA
TAGGCCCTGGATTCGCTTTCACCTGCAACCAACACCAATACAGTCAATGATTTTGCTTTC
TCTAGGAACCAGCAAAAAATCATATGGATCACTCACGGTGTTTACAGAATCCTCGAGATC
CTTGAGGAATTCCTCGTAAATTGCCGTGTGTTGAAGTGTCACGCAGATGTGCAAACTGAA
GAACCAAACAGCACTGTCAGGATTGACACCGATACATGGAAAAACACAAGCTGATTTGTT
GGATGAAGTCGGGTTAATTCGGATTTACCTGTTGGGTCTCTGAAGAGCATTGAGGTGCCA
TCCTTTTGATGACATTATGTCATTCACCTCAAATATGTCGACCGCGTCCGACCCAAAGGC
CACGACAGTCATGTCTGGTTTCCCAATCACAAATAAACCTGAGATATCATCAATTCTGTG
CAAACAATTACACTGTTAGTCTAGATGCAAAATTAGAGAATTACTATAAGGATTCAGACA
TTCTCATTCCACATTTACAAGGATATCTGGAATAAAAAGATTATTAATTTGGCATTTGAA
TATTAGTCCAGAAAAGGTGCGAATTATACATCATAAATAATGTATGTATGGTCAGTCATA
ATAATATATTAATCTCCAAATGACCGTTAGTTCACAACATATCATAACTCTTATTTTGAA
AATGCTAGATTTTTTTTTTGCAAAACACTAGTGATGTCAGTCTTTATACATGTCTGTTTA
TACTTTATAGTAGCCTTTCGAACATGATAATCAAACAGTATTTTTTTACCCTTTTTGTAT
CTTCTTTGAGACTTCCATGATTTGACCCGTACTTTCCAAGTAACCTGGAAAACAAGCAAC
AGGCCCAGGCTACATCAGGAATGCTGTTCTAATACAGAACTACCACCACTCTGATATATT
TTAAGAATAAAGTTGTTACCATTCAATCCAAGAGACATCATCGCAGCCCAAGCTCCTGCG
ATTAGCCCACCTGGCCTGCTTCCAGCCATGGTAGGGGAAACATAGAGCCCACCAGTCCAT
TCAGTCACTGAGCAAATAAGGAAAGGTAACACAGTATATTAGTCTTGTAATGTTTGCCAA
CTTAGGCTATAAACATAAACAAACATTGTCAGACACATGAACAACTAGATGCATGAGTAG
TATACAGCTGTGTGCCACCAGTACCACTACCAGAGGCAACTACTACACAGCCTAGGTTGA
TATATTAGAAAAAAGAAGCACCAATAACAAAATCTTCTTCACTGTGTTTCAACAATTGAC
TGGAAATGACACAAAATGTTTTCCCTTTTTTTATTGATTTCGCAACAGAAATTACGGTGT
CCAGTCGAGTAAATGTTGAAGTCGGGATCTGATTGTTTTTGTATAATTCAAAGAAGATGG
AGACTTACCAGCAACAAATTGGTGCTGAATATGACGCAATATCGAAGATGGCGGCGCCAA
TCACAAAAGAGAGATAAAATGTTAGAAAATTGCAGAGAAAAGTGAAGATAAATATTCCAT
GCTTATTTCTACCTTTCTAATTTCATGATTCCTGTATAGGACAGTGCTGGTGCCTTTTGG
GGCTAGCCCATACTTATGAACATCTGTTGAGATCGACGTAACACCTTTGACAGAAAAATC
AAAAGGAGGAACAGGGTACCTGAATGTTGCAAAGGACAAGTAGGTATAACATTAATGCTG
ACAGGAAACTTCAAAATAGCGGATAGCACATCCATTGAAAGTTGTAGCACAATAGTTCAA
AAAATACAAAATACTAAAAGTATGTATCATGAAATGTTATAATGGATTTCTTCAAAGTTG
GCACATGTATTATTACTGCGGACAAGGAGTCACGGCACAGTTAGAGAACATTAGATAACT
GAAACAATTTAATTATTATGCGAAGAGTAAGTACCCAAGCTTACGGGCGAAAGGCAATAC
GAAGCCACCAAGGCATAGATCAACATGCAAGCAAATACCATATTCTGAAGCCAACTCCCC
AAGTTCCTGAAATAATTTGAGTTATGAAGCAACCACCAAACTTGCTGATGCAACAGCGCA
AGAAGCACGACTAATTCTTATTTACCTCGATGGGATCAATTAAACCATGGGGAAATCCTG
GTGCAGATCCAACCATCTGGACAATAGAAGTTAGGCATCAATGCACATAGGCAGACAACA
CATTTGAGCTGGAAGCAAGACAGTAAGGTACATACTAGTCTCTCGAATCTCAGGTGAATG
GATGCTTAGTTGCTTACCATTATGGTGTTTCCATTTATGCACCGTTTGAATCCTTTTACA
TCTGCAAGAAATTCTTTATTCACAGGTACACGCCGCACTTTAATATTGAAATATTGAGCA
GCTTTGTCATAGGCAGAATGAGCTGATTCAGCAATTATCCTGTATAATAAACTTTTGTTA
CCATGGAGACAAAGAGATTGCAATGCTTCCAAAGCAAACACAGACACACACACACACACA
CACTTGTTGAGAAAACCAAATAGAGTTCATCACTGCCTCACATTTCAGGCTTTGTGATTC
CTTTCTTTGACTGCATATAATCACGTGATGTTTTGACAGCCAATAATATGCTTTCTGTTC
CACCTGACGTCATATTGCCACAAATTTGTCCACCAGATGCCTTTTCTTTGCTGCCAAGCA
AAGCTGCTGTCATTGCAACTACTTCAGCCTCTAGCTGTGCCACACTCTTGAATACATCCT
GATGCAGTGGATTTGTGTGTGAAAACCTGAAAACATTGAGAAAAAATTATGCATACTTCA
TTTGGAAATCATCATTAGAGAACGTAGTATGAGTCTAAAGGTTAGGTATATAATGCAAGG
CCTATTCACGCCACAGCAAAAAACATTTAATTAGGAAGAAACAAATCCCAAATTCTCTAT
CCCTATTCCCTATTACTGATCATGGATGTAGATGCTTCACTGACTAATCTTTCGGATAGC
CTATAGTCATATTATTTAGAACTTCTTTACCGATCTTGCTTGTACAGGTAGCATGTAAAT
TTTAAGGGAGTGTCCCCTGAAAAGCAAATATGACATTTGTTTTACATAAGCAAGAGTCAT
CACCTATCATTACCTAAAAAAAGGCACCGTCGCCTATTACTGCTACATTTTCTATGTAAG
GTGGAAAGTGATACAAAGTATATGTCATGAACAGGTCGTGTATAAATAAAGACAGTTCAT
ATCTGGAGTAGCCAGGATGTGTTAACATCTCAGGCCTTACATAGAGTAGGCCTTGTTTAT
AAGTGAAAAATGGCCTTCGGACTCGCTCCCAGCGATATAACTGCAAGAAACAGAGAGCAG
AGTTAGGCACGCTTATTTGACATGAACAAAAAAAGTAAGAACAATAGAGTAGAATTAAAA
GTTCTAAGAACACGAAGCAGTTCGAGTTCATCATGCCGTTGAGGTGCACGTGCACGTACA
CGGTGCCGGAGCATTTGCCCTGCCATCTCACATCCTTGTCCTTGAGCGCCTGGAGCTCGC
CTATTACCCCGTCGGGATCCCCGATGGCGGGCAGCTCGGTTCGCAGGTTCTTCTTGCTGG
ATGCACTTCCTGACTGCAACTGCTCAACAACCTGCAGCACGGATGACACAAGGTAAGCAA
TCAGTTTAGTCACCGATGTCAGCATGGGTATGGGTGTGGCGTGCACGGCAGCAAGTGAGT
ATGAGTATGAGATGCGTGTGCTGTCTGTCCGTCCGTTTCCAACAGTGCAATGATATCGTC
TTCCTTATCTTATCTGACCCTAATGCGTGCAAGATTCCTCCTTTGATCATGTCACAAGAA
TTCTTCAGAAAATCTAGAATCGACAGGGAATGGATGCTTGTTCATCTGCTGCGGGATGGG
AATGGGATCGGATGGTGATAGGATTACCTTGCTCTTCTGGGCGGCGATGTATCCGCCAAC
CCCCGGCACCAACCTGCAGGCGCGGAGCAGATTAGATTGGATTAGGCAGATGAACTGGCT
AGCTAGCTGAGCGGCGCTCGGTTGGATGAAGGCGAGGAAGATAAGCGAGAAGAGATAGGT
GTACTTGAGCGCGGCCATGGCGAGGGTGATGAGGACGGCGCGGAGGCCGCGGTCGGCGAC
GTGGGCGGCGGCGGCGTGG