morexGenes - Barley RNA-seq Database

Contig contig_44760
Source Contig contig_44760
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_44760 (10133 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_44760

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60769	10	2045 bp	MLOC_60769.5	Available	Available	LOC_Os08g01610.1, FRAME:-3, EVALUE:0.0, 13108.m00084 protein DUF250 domain containing protein, putative, expressed
MLOC_60770	1	192 bp	AK372440	Not available	Available	None
CDS Structure of MLOC_60769

CDS Structure of MLOC_60770

Contig Sequence (10133 bp)

>contig_44760 10133 assembly3_WGSMorex_rbca.fasta
TACAGATCGATGACGATCTCCGCCTATTTGATCCAGCAAGAGAGACGAAGAGGAAGCTGA
AACTCCTTAGGTCGACGCAGAGGATCCCGCGAGCTGCAATTGGACAGAAGATCCCGACGC
TGCAGAAGATATCTCCGGTGCCACCGGATCAGCTGAGGCCACATCACGAGGAGAAGAAGG
TGCGGGTGACATAGAAGATCCGGGCAAAGCCGTCAAATCTGGGTGGGTTCCCGCACCCGC
AGACGATGCGCCCGCGTGCCGCCGGATGTAGACGTGTGGGTCCGGGCCAAACCGCGTGGG
TGGTTGCGCCTACCACGGCTACAATCCCGAAGAAGATGGCACCGTCGTTGTTGCCACGAT
CCCGAGGGAGATGCGGCTACAGCGTTGTCTCGTGACGCCGGACACATTAAATAGTGACCG
TGGTGGCCATTTTCTCCATGGTTTAGCACCGAATGTTTTTCTACTCATGAATCACTCGAT
CCTGCATTGTCACAAACCTCAACTGCATGGTTAGAAGAGTTAGTCAAGTGGTCATTGCAA
TTGCCATCCCCCGGGAAAGAACAAGATAAATGTGGTGGTAAAATAAGGGTTCTTAACGAA
GAAGGGATCGACATTGGGGTGAAGATCTGCGAAAGGAAACACTTTCTCATTGAAAACAAC
ATCACGGGAGATATATACTCGACCAGTAGAAACATCAAGGCACTGAACACCTTTATGTTG
AGCACTATATCCCAAGAAAACACATTGTCTTGAGTGAAACATAAGTTTGCGAGTGTTGTA
GGGACCAAGGTTGGGCCAATAAGTGCAACCAAAGACACGAAGTGAATGATAGTTTGTTCG
ACTATGAAGAAGATGTTGCATGGGTGTTTCATTATTAATGACTCGGCTAGGGAGCATATT
GATAACATGAACCGCACTTAGGAAGGCCTCATCCAAAAATTTTAGGGGCATGGAGATACC
TGCAAGGAGGGCAAGCCCAACTTCAACTATGTGTCGGTATTTGCGTTCCGCAGACCCATT
TTGTTGATGCGCATGTGGACATGAAACATGATGTGAAACACCAAATTTTTGAAAAAATGA
GTTTAACTTTTCATATTCGGCACCCCAATCAGATTGGACGGCAAGAATCTTTGTGTCAAA
TTGTCGTTCAACAAGTGCTTGAAAGTTATGAAAAAATTGAAAAACGTAAGAACGTCTTTG
AAGAAGATAAATCCAAGTAAATTTACTATAATCATTGATGAAGCTAACATAATAAGTATG
TCTACCAACAGAAGAAGGGGTTGGTCCCCATACATCAGAGAACACAAGTTGCAAAGGCTT
GGTAGGAATATTTTGGACACAGGATAAGGCAAATGACGACCTTTTGCATTTTGACATGAA
TCACAAATAGTTTCAAGACTATGCTCACCAACACATGGGAGCTAATTATTTCTAAGCACT
TGTTGAAGAATAATAAAAGAGGGATGTCTTAATCGCGCATGCCACTGTTCGGACGAAAGT
TTGATAACACCACGAACTTGTTTATTGAATCTTCTAAACTGAGCAATCAAAGAGTAGAGC
CCATGCACGCATCTACCGAGGTAAAGAATTTTCATTGTGACCTGATCACGAATAAAAAAA
ACTAAGGGTAAAACTCAAGAAAAACGTGGTTGTCTAAGGCAATGCGATGGACAGAAAGAG
GATTTTTCAGTTTGTGGGACATGCAAAATATTTTTGAGATGAAGGTTGTGATGAGGAGTG
CTGACAATTGCATGACCAACATGATCTATCTTCATACCTTCACCATTGGTGTTGTGGACT
TGATCGTGGACAAGGTACTTCTCGTGCATGGTGAACTTTTATAGCTCATTGGTGATGTGG
TTTGTGGCTCCAGTGTCGACGTACCAATTGGTGCCACCTCCATAGAAGGTGTCTGCATCT
GCTGCAACTTTCTTGTGTTGAGAATTGTTCTCGGCATAGCGCCAATAACAATCCTTAGCA
ATATGATTATTGTTTTTTGCAAATGTGGCATTTATTTTCATATTCATCATAACCTTGAAA
TGGACGGCCCTTATTGTTGTTGTAGAAGGGACGCCGGCTATTGTTGCGAGAGTGTTGGAG
TTGTTGTTGTTGTTGTTTTGGTCATGGCCGCCGCCACCACTAGCGTCGCCGCAGGCGTTG
CCATTGTTGTTATAGTTGGTGTTGCCCGTGTTGTAGTTGTTGCCTCCACTGCTGCCACCA
CCCTAGCCGCCGTGAGATCCCCCTCCACCGTCGCCTATGTTGTTGTTGCAGTAGCCTCTC
GGAGATCCACCACGGCCTCGGGCAACGATTTTTGCAGAAGACTTGAAAGCTCCTACCCCT
GTTCCGTGGAACATATCGACATGTTGGTCAAAATTAGCAACCATGCCAAAGAGATCATCC
ATGGACAGTGGTTTGGTGCAGAAGTCCAGCGCCAATATTAGGGGTTGATAGTCCATATCC
ATCTCCCGATGATGAAGGACAAAAGTTCTTGATCGGAGATAGGTTTCCTAGCCACGGCGA
GCTCATCGCAGAGAGCACGCATATGGCTGAAATAGGTGATGGTGTTTTGAGAGTCTTTTT
GGGCGTTGGATAGAGTGATGCGATAGTTTTGTTCGCAGGAGCAGGACTGGGTTGCAAACA
TGTTGGCTAAAGCTTCCCATATTGCATGGGATTTCTCCAAGGATGCAACTTGGATCAAAA
CTTCTTTGGAGAGATCGCGCAGCGGGTAGGCAACTATTTGTTGATCCTGGACGAGCCAGG
GATTGTAGGCGGGATTGGATATGGACTGATCTTTGCCACTGTAGTTCGTGCTCACGATGC
TTTTAGGTGGTTCGGGAATAGATTGATCTATGTACCCATATAGCCCTGCCCCCATAATGT
GAGAGCGAGCTTGGGCTTTCCAAAGAACGTAGTTGGTGCGGTTGAGTGGCTCAGATGTGG
AGTAGTTGAGGCCGGGGGAAGGAATCTGTGTGGAGGACGACATGGCTGCTCGAGGTGGAA
GATGATGGTTGCAGGAAGAAAGGGTTAGCTAGATGGGATGGGAGAGGAGGCTCTGTATAC
CATGTCAAAGATGGATGAAGCGTCTCAACTGTCATACATGACAGCCCACAGGTTATATAT
TGATAATGACTTAGGTTACAATGTTTCGATGGTGATGTTTAACCAACCAGATAGATTAGA
GGAGGTTGAGAGATAGAGATAAACATGACAGCTAATATCTCTATATACATGTGCGGGACC
AAAGCCTAACCGAGGCCTAAGATCCTGAGAACAATATTCTTCAACACCGATGAGCTGGTA
CAGTCAAAATATGGTACCGTGCCCGACGCCCATCTCTCCTACGACGAAGCCCTAATTGAT
CCAGGTGGAGACCAGAGGGAGAAAGGGAAAGAAGTGTGAGGGCTCCATTGATGCCTTCCA
TGGATTTTCCTACCCTCAAGGGGGAAATAAAGGCCCTTCCCCTTTGGAAGGTTGTGGGCG
AGGATGGATTCAAACCCTTGACACAGTGGTTCATAGCCAAGTGCTCTAATCCTATGAGCT
ACACACCCAACTGTCCACATTGGATTTCTTTCCGGATACCCTTTGATTTTAGATTAAGAT
GGGGAAATGCCTTTCTCTCTATAAGAACAGTGTGTTCCGAGGCGTGAAATGGGAAAGAGG
GGGTGTGATGATTGAGGTTTAGATTTGTATCTTTTTCTTATTACATTTCAAAATGGTGAA
AAAGTAAAAGAAGAGGTGTCAAACTTTTTATCATTCTGGCGGGGAGACCGGAGGCAGGAA
TACGGGAGTTCCCTAGAATTTTATGCGTACAGTTTCAGAGGGGAAAAAAATCATCAGATG
TATAGCATTTTAGAAAAGGCCGGATAAGTATGTTGTTTGTCCCGCAGTTTGTGGCCATTT
AGTCGAGGTACTAAAAGACATAACTTATCTCCTTAGAAATATAATTCTATGGAGTGATAT
GTTTCGTCCATGACTCCATGGTGCAGCCAAACATGCGTTGGTTTCACAAGGTTTTTATCA
TGCAGAGGATCAAATGGCTTTGCCACTGCAGACTGCAGTCCTCAGAAGTTGATGATAGAA
GTGTCCTTTTCCGAGTAGCTGAACCAAGTGCATTTCCCCTTCTCATATACACATTGCAAT
GCATCGACCCACCCACCAACAGTGCGGGTACCTATCTGTATGACTCTATCATACATGCAA
CCATCAAGACGTGCAAGACGTATACCACCACCATTCGAACAACAGCAGGGTTCAGATCGT
CGGCCGGAAGAAAAGAAGAAGAAAACAAGAGCCCCAGGCTAACTAACATGATGTTGCCTC
CCTCCTTTGCCAACTGGGAAAGAACGTCACGCCTGCACAATTTTTTCCCACAGTGTAATT
TGAGGGAGCATCCTGCTTTCGACGATCAGCAGAATACTGCACTCTTCTAGCACCTATATA
TACAGCTTGGCCGACAGCTAGGACTGGGAGTTGTTGCGCAATTTCCCCCTGGCGAAAAAT
ACCCCTGCTAATAGACCTGCAGGGTCGACGGTACATTTTTCCTTTTGTTAGCGAAATGAG
ATGCGCATGTCAGCCCAAAGGTAATATATAAGCTTGGCATCATCATGGATAAAACCTACC
AAGCAGTATACTTATGGAGTTTTCCATGCTTGTGCGGACTTTGAAGAGAAGGATCCCGGC
AATAGAGAGCGGGATCTTGTTGAGAGACCCCACAAGGCTGCAACAGGAGCAATGTCGGCG
TTAGAAGCTCACCAAGAGTGAAGTGCATCCATCATTTGGTACCTATAGGTTGTTGCGCTT
GTCTGACGAAGAAACCACATCGAAGTAAAGCTGATAGCAAGCCCCAAAACTCCGCTTGCA
GTGATGACTAGCCAAAACATAGGCATCCTCAGAAGAGGCCTGCAAATTCACCTTTTCATA
AGACTGAAGAGTATAATATTTGCAATCGTAGTTACAAAAAACTGCTAGCAGATGTGATTG
GATTAGTTGCATCTTCTTTTGCAAAAAAAAGGACTAGTTGCATCTTAGTAGGACATGAAA
GAAACTTTTCAGGATGAATGGTCTCTTCGTTTCACAGATGGAGGTGACACAGTTTTCACC
TACTTTCATTAGGTTCGTGCTAGAACAAGCGAGCGGATGAAGTTTAAATCACGGGCTTAC
GTTTCCAACAGGTACTCCACTTCATTAAAACCAAGCACAAGGATAATTCCCAATGGTAGT
GAAAGAACGTTGTTCAGTAAAACCATCGAAATCTCATTCAAATTCCCAGACTTGGTGGCC
TGCTTAGCACTGTCCATTACATGCCGCAATGTAAGCTGGAAGAAAACAGTTCATTTGTTG
AAATTTATATTGAGGCACCTCAGAACTGAAGATATTTGTCCCATAAACTAGTGTCAATCT
ATGGGACTGGAGATAATAATCTAAAACATTTGGGAGGAGAAACAGTTTTCAGGTTATCAA
TGATTCAGTGGCATCAAGAAGAATACCGAATACGATGCTGTTAGAAAACAATTTAAGATC
TGCCATGTATAGCCGACTGCATGAAATGAGAGATCTGTTATTCCTCCTGCAATAGCTGAG
ATTATCTACAGAAATATAAAGGTGAGTCAGGTCTTCAGTACACTGTTATTTTGAGCGTTT
CATGAACACCTATGATTAGATATAAGGTAACAAATCAACTACATACAATTATTCAGCAAC
TGAAGAACAAAATAAGCCACTCAAGCATTCTAGTCCTATTTAAACACGTGTAACTTCTAA
TTTTGTCATACCATCAACATAAGCGAAATCCAAACTTGTCCATCGTGTTGCTTCTTAAAG
AAGTAGGTTTCCCCAGAAGCAGTAAGAACATTTGCGACATTCTTCAAGATAGTCAACATC
GCAACATTGATGTACTTCAAACTGTAAGATGCAGAAAATATTAAAAGGTGCAGGAAATAT
ATTCTAAGAAAGACTATGAACTTGGAATATATTTTAAGAAAGACTACAAACTTGGAAACA
GCCTCTTGCAGAAATGTGGGGAAAAGCTGTGTACAGAAGACCAAAAGTGGTCGGACCCTT
CCCCGGACCCTGCGCAAGCGGGAGCTACATGTGCCTGGCTGCCCTTTACTACGAACTTCA
GTGTGATGCATCGTTATTAGTAGTTGAGGAGCAATTTCCTCACATCTCACTTGGAAAAAC
TCAACTCAAAATTTCTGAAAGCCTAGAAACTGTTTCAGGTTTATCATTATCCTATATCAA
ACTAATTCACCATGAACACAGCAAGAGCAGATGAACTGCAACACATATTCCTAACAAATT
TTAGAGAGAAGTCCATTTTTCGTCCCTCGGTTCTTTGGTCTAGCCACTTTTGGTCCCTCA
ACTCTAAAACCGGACAAATTGCACCACGAACTCTCGAAACCGGTCATTTTTCGTCACTGC
GGGGTTCCACTGCAGAGTCAACCTTGTTGACCACGCCATGAACAGTACACCGATGACACT
AAATTAAAAAAAGTAAAAAAAATCAAAATAAAATCTGAAATTTTATGACTTCGAAGATAG
TCAGGTCCACAAGGTCCGTGCAAATTGTCGGCATGTTTGGGCGTTCTATGAGGTTGCAAA
AAAAACTGCTCTGAGATGAACAGTAAATTCAAAAAAATAGCAAAAACAACCAAAAAAATC
TGAAATGTTTTGCCATCGAAGATGCTTGGGTGCGTAAGGCGCATGGAAATTTTAATGGTC
AAATGACATCTGAAGAGCTTGTGGCAAAAAAAAAAGTCGTACGTGTGTGTGCCGCTTCGG
GTGGTTTCCAAACCCTTGGATGTCATTTGACCACGAAAATTTTGTAACTATTTTTTAATT
TACTGTTCATCACAGAGCAGATTTACTTTTTTTTTTGCCGTGAGCTAATCGAACGTCCAG
ACATGACAAAATTTTACACAAACCTTGCATACTTGACTATCTTTGATGTCATAAAATTTG
AGAGTGTTCTTCAAATTTTATCATGTGAGAGTGAAGCAAAGAAACAAAGTGTGGTCTTCA
AATTTTATCGAATGAAGGAATATATAAAAATAAAAATAATTAAGTGCTTAAATTCAGTAA
ACAATTCCATATTCTCATACTGAATTGGTTACAAGTACAGACTAACTATACTGCACAGAA
AATAGTGCTCAGCTCAAAATGATGTGAAGATCTGACACATACCTAAACATGCTTGTGATT
AGCATTCCGACAAATATGATGTTCACAGGCAACCAAACTTTGATTAACTTCCATGTTAAT
GGTTCAGTTCGGATAACACGAGAGAGGGACAGTGCAGAAACTATGGTCACTGATACAATG
TTCTGCAGTAAAACGTGATGAAGACATTATCAATGTCACCCAAGCAGAATAGACACAACA
CAGAAGGAAAACAGAATTGCTCGTTAAGTATACAGTCAGTAATAAAACTTTACCTGGTAA
ATCATCAGAAATATTCCAGCGTTGAAACCATAGCCAGACAACACAAACTTATTAACTAAA
ATCATGCTGCATGATGCTATGCAGTAAGCAGAACCAGATAGAAGAGACTGATTCTGAATG
TTTGGGAGCCTGGGCAAGTGTGAAGGCATATCTCTATCTTTTGAGGCCTTAACGTCTTCC
AGGTCTGTGTCATCAACACAGGAAGTTCCCGTCGTAGATCTGGAAAAGATATGAGACAGA
AATACAACGGCTGTGTTAGCTTGCATGATGATTGCTTCCAAGATACTTTCATTGAGGAGA
ATAAGGTTCAGAAGATGTTTTCAGATTATTTTGGTTTTTTATGACACTACTGATCAAGGG
AAGCTTACATGCCTGTTGCCAATGTCTGGTGCTTTTCTCCCAAGAGGGGCGTCGGGATCA
ACATGAGTGACTAACGGAGGGTTTCTGCAGAGACAATGGAACTCTTGCAATCAACAGTAA
TCCAATTATTAAATCAATTTTCGCTGGCTTATATATTGTGAAGCATCTAAAATTAAAATC
TGAACCCATAGACCAAGCATGTGTGTGAAACCAATGGCAGTTCAAAACGCATCATACTGG
AGGATAATTATAAGCATTTGCATTCTCCTAAAGAGTCACCATGCTCCCCTAGTTAAAATA
AGGCTAAATTGATCGATTTCAGTGGGGTTTTCCAGTTATAGTTAGCTGCAGGACTAGTAC
TGTACTATGCAGCAAAACTGTCCTGCCAATGGTGCTAGTATTGAACATAATTCGACAGGA
CTGCACTGAGCAGGACATAAGTCGTCAACCTAGTACGCTCTGCAATTAATTCCAGTGCAT
TTGGAGGGGCTAAAAGCCAAACTGAAACGAATTGAAATGAGGTTTCGCAGGCCCGCACGC
TTCGGAAGTAACCCGAAGTCGAGCTAATCAACAGAAAAGTGCAAGGAAGAATCCGGTTAA
CAATTTAGCGCTTCGGGAATCGAATCGCAAGTTCAGGAAAGCAAGCGGACGTTTGAGCAA
CCCAGCCTAAGCACTACGGCTCCTAATCGGAAGCAAGGCACAACCAAACCGGCGTGAAAT
CTCAACTGCCGTACCCGAAGGGATCATCGGAGCTCAGGCGAGACACTGGGAGAGGGCCGT
ACGTGGAGGTTGGGAGAACGAAAGAGGTCGACCGGGAGCTCACCTGGAAGCCATGGCCTC
AGAGCAGGGTACCCGGGGACACCGAGCGGCTCCCTTTTGGCCCACGGAGACGGAGGCGGG
ACTGCGCCGGCGAGGTGCTAGCGCGGCGGAGGAGCTGGGAGCGGCGGCGACTCGGAAAGT
AACGGAAGGGGGGGCTGCCTGGCTTTTAAAATATCCGGCGGAAGAAGGAACGTTCGCACG
CTGACCGGCGGGCCCCCGCCGTGATACAGCTGACACAGCTTGGCTTTGCTCCCCTGCGGC
TGCTGCTTTTAATCTTCGGCACGCTGCGGCATCGGCCGTCTCTGGTCGCTGAGTACCGGG
TCCCGCTTACGCGTTGGTCCACGTTACAGTGGCTGGGAAGGAAGGGGCGACCGAGCACGG
GGAAGTGGTTGCTCTGAGCTACGGGGGTTACGTCTGGCATTTGTTTACCCTTTTATTTTA
GACGTGTAAAGTTTTCGTCGATTGAGCAAAGTGAGGTGGCATGTTTTGTGTGAGTGTGGC
CGTTTGTACATTGCTTTTTTTTTTTTAAAGATCCAGCTGCTGGCTGGCATATATTAAACG
AAGCAGGTAGAAAGCGGGAATACAACAGGATGGAGACGATCCAGAACGAATCAATGGAAA
AAATCAGAAGAAACAAAAAGAAATGGATACATCCGTCCCCGTAGGGAAAAAACAAACTAC
GTGACTACTCCTGTTGGCTCCCCGAAAGGATACACGAGGCAGGCCACTCCTGCCTGCCTC
CAAAGCTCCATGGTATCTTGTATAGAATTTGTTATGTTGTTGACGGCGGGAGTCTTTCCT
CTGAAAGTGCAGTCGTTTCGCTCCTTCCAGATTTGTGATAATATAATCACAATCATAGAC
CTAATCCCTTTCTTGTGCTCTGGCCTGGCTTTGCTTATCATGTCCATTATGATATCCTGT
GGTGTGGTCCTGCCTTTCCATACTGCTGGGTTAAGCGATACACAGCCGTTTCTGGCCGAC
GATAGTGTCCATACTTCAAGCACCTTCGTACATTGCCAGAACAAATGTTCGGCCGTTTCT
AGATTTCGGAGGCAGAGCTGGCAAAAGTACACGTTTGGCCATCCCCTCCTCTGCAGTCGG
TCGTTGCACCATAGCCTGTTCCTCAATAGCAGCCTGTAAAAGATTTTTAGCCTAGCAGGT
GCCCAAGAAGCCCAGATCAGCTTTCTAAGGGGTGATCTTGTGTGCCCCTGGAACTGGGCC
TTGTACGCTGAGCGAGCGGAGTATAGCCCTGACGCCTCGTGTATCCAAGAGATGTTGTCC
CTGGAGTTTTCCTGGAGGTGAGGCCCTGAAGTTTGCAACCATCTATGCAGCCTAAGCGTC
TCTGCCCAAATGTGAGCATTCTCGCCGTGGGCAAGGTCCTTTATCCATGTGTCGTTATGG
AGAGCCTCTCTCACTGAACGGTTCTTTTTTTCTAGAGTGTTTGTGCAGCGTTGGAAATTC
CGTTCTAAGGTTTCCTGCTCCCGTCCAGGAGCAGTGCCAGAAAGAGGCAATCG