morexGenes - Barley RNA-seq Database

Contig contig_44726
Source Contig contig_44726
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_44726 (10325 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location
Predicted Genes from contig_44726

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_60745	2	1148 bp	MLOC_60745.2	Available	Available	None
MLOC_60747	1	1001 bp	MLOC_60747.1	Available	Available	LOC_Os09g23370.2, FRAME:-3, EVALUE:1e-78, 13109.m02207 protein proline-rich protein 6, putative, expressed
MLOC_60746	1	820 bp	None	Available	Available	None
MLOC_60744	1	872 bp	None	Available	Available	None
CDS Structure of MLOC_60745

CDS Structure of MLOC_60747

CDS Structure of MLOC_60746

CDS Structure of MLOC_60744

Contig Sequence (10325 bp)

>contig_44726 10325 assembly3_WGSMorex_rbca.fasta
GCACAAGATGAGTTTCATGTTTCTGGCCTTTTAAGATTATGTTCCATAAAAAGGATCGTG
TCATCTGCATACTTTAGAATAGAGACACCCCCATCCACTAGATGTGGTACTAGTCCCCGT
ACAAGGTCTTTCTCATTAGCTCTCTGATCATGAGTGCCAACATATCTTCAACAATGTTAA
ATAAAAATAGGAAACATAGGGTCACCTTGTCTAAGACCCTTCAGTGTCTGAAAGAAATGA
CCCACATCATCATTTACTTTAATACCGACACTTCCTTTTTTTATAAAAAAAGTCGATATG
CTTGCGCCATATCTCACCAAACCCCTTCATACATAGGGTTTGTTGTAGAAAAGACCATTT
CACTTTGTCGTATGCTTTTTCAAAATCTACTTTGAATATCACTCCATCAAGTTTCTTGGA
GTGCATCTCATGCAAAGTCTCATGTAAGACCACGACCCGTTCTAGAATGTTATGTCCAGG
CATAAAGGTCGTCTGCGTATATTGCACCATCGAATGGGCCATCTTAGTTAGCCTATCCGT
TCCCACCTTCGTGAAAATTTTGAAGCTAACGTTTAACACACAAATAGGACGAAATTGTTC
AATCCGCGTAGCACCCTCCTTCTTTGGTAACAACGTAATGGTACCAAAATTCAGGTGAAA
GAGTTGTAAGTGTCCACAAAACAGATCATGAAACATTGACATCAGGTCTTTCTTGATAAT
ATGCCGACACTTCTTATAAAACTCAGCCGGAAACCCATCTGGACCGGGAGCTTTTCCGTT
CCTCATACCCTCAATAGCCTGTAACACCTCTTTCTCCAAAAATGGAGCGGATAAACTCTC
ATTATCGGCCTCTCCGACTTGAGTAATATCCTCTACCCGATGCTCATACATAGACACAAA
ACTATGATCTGGAGCACCAAACAACTGTTTCTAATAGTTCGAGATATACAATTTTAGATT
CTCATGACCTACTATTGTACCCTCATCCTACTCAAGCTGCAGAATCCTCTTTTTCCTATG
TTTGCCATTTGCAATTAAGTGGAAAAATCTGGTGTTATTGTCCCCATGGACGATTGCCCT
TACTTTGGCTCTAAGTGCCCATTTCATTTCCTCCTCTCTAAGGAGGACTCGTACTCTTTG
TCCAGCCTCGTTCTTTGAAGACCGTTCGTTTTCATCCAACACACAGGTCTCTGCCTTACG
ATCCAGATCATCTATAAGTTTGAGAAGTCTGTCTTGCTCATCCTTATAAATCCCAAAGAC
ATTCTTAGCCCAACCTCGTAAAAATTGTCTAAGATGTCGGATCTTGTTTTGTCATCTGTC
CACGTTTGAATTCCCACCCACTTCCTTGTTCCATTCCCTATCAATCATGTTCATAAAGCC
CTCACGTGTGAACCAACTAGATTCAAAGGAGAAACCATCTTTTTCCCCCATATGAGTGGC
ATTACCAGAGTCTAGCAAAAGTGGAGTGTGGTCAGATATTGCCCTTTGAAGTGCTCGTAC
CGTTACTAGCGGGAACTTCTGTTCCCAATCAATGCTAGTAAGCACCCTGTCCAACTTTTC
AAAAGTCTGATTTTGTAGAGAATTAGCCCAGGTATATTTCCTACCTGAGAGATCAATCTT
CCTGAGGTCCAGGCTCTATGATTCTGTTGAACATAAATGGCCATTTGCCATCGAAATTAT
CATTGTTTTTTTTCATCAGCACGCCTGATGATATTGAAGTCACCCCCTACCAACAATGGT
AATTTCTCGTCACAAATCCTAACCAGATCAGCAAGAAAGTCGGGTTTATGCTCCGTCTGG
GTTGCACCATAAACAGCAACAAGAGCCCATTGAAACCCATCTCCCTTAGGTCGAATCCTA
AATTTGACCGTAAACTCCCCTAACACCACTTCTCGCACTTGAAGGGTTTCGCATCGGACT
CCAAGTAAGATCCCACCGGACCTTCCTCTTGGAGGGAGACAGTGCGAGTCGAAACCAACT
CTTGCTGATAAAGAGCTTAGGAACTATGATGTGAAACTATCTCGCCCTGTCTCCATTAGC
GCGATAAAATCAAGACTGTGCTCTAAAGTCACCTCTGCTAGGAACCTAATTTTAGCCAAG
TCTCTCAGACCTCTGCTATTCCAAAAATTCCTCTCATGTTTCATCATGGAATTTTTTTGC
AGTCTTAGATCTAGCACTTCTACGCAGTGTAGAAACCAGATACACTTTCCATTTCCAAGT
TCGTTTTGGTTTTTTCAGAAGCAAACACCTGGTCCATATAACCAGGTATTTCTATGCCAA
CATCACAAAACTGCCCATTGGGTAAGCATTGATCATGAAGATCATCATCTCCCTCCTCTA
GAGCATCCATTGGGGCTAGATTCTCACAAAGCAAATTCAGCCCCCCAGTTTAGTGATCTC
AGAATCGTTCATTGGTTGCCCTACAGCTAAGTTCCGAATAATATCTAAAGCCCTATCGAC
TTCTAAGTCCAGTAGGTCATTAATAGATTTTGAAACTTCTTTACTCGTGTTACCCAAGGT
AACCCCAACAGAAACAACATTATCTATAATTTCATGCGGTGAAAAATGAGGAATGGAATG
GTCTGTGTTAATTGACATACCTGTCGAATTTTTAGCATCCTTCACTTTTGCAGCCTGCAT
TGCACAACCCATCTGCAAGTCGTCCGCATCTGGCTGAGTCTGGATCCGCTGACTAGACCT
TCTATCCGGAGTCATCGGATTCAGAATACCGCCAAATGCTATAACTCCGTCAACAGAGAA
CTGTGCAATACCTTGCTTGGTTGCCGCCACTTGTGCACTATCTATGTCCACCTTCGACAC
CAGTTCCAATCCATCCACTAGGACCGAAGCATTAGTCTTAGGAGAGAGAGGGCTGGACTG
CACACCTCCATCCAGCACCAAGTTGTCCACTATTCTTTCGTCAGGATCGAAAGTATTGGA
GTTGCAACCACCATCCAGCGCCATGTTGCCAACCGTTCTAGCTCCAGCCAGATACTCCCC
AAGTGACACAGTCGGTAGCACCTGCTTAGGTTGCGAAATAGTAAGATCAGCCTTACCCCG
TGGGTTCTTCCCTGGGAACCTTGGTAGCCTAGACTGAAGCAGGCCCTCTTTGTCCGCCGC
CCCACGTGCTCCTCCAACCCTAGCTGGCGTGGAAGCGGGTTCGAAGGAACCAAACCTCAG
CTCGTCCATAGGTGCATTAGCCGAGCGGCTACCCCCTGCACCTGTATTAGGCGAAGACAG
TGTGTGGTTCGGCTCCTTAGTGTTCACAGACGGTTGATGATGTTTTTCTGACTCCCTTGA
ACCAACAACATCATCTCCATCCGTCATATGGACGTCCTTGTCTGTCACACCCTCATCGAA
CAACAGAGGACTCTCAATCTCGAGCTGGAGAGTATATCGCATTCCCGCATGAGTCCATAC
AACCTCATCCGGAACTAGCTCAATATCAATCACACTAACCAGCACCCTCGCAACACCTTT
AGCTCTAGTGAACACCATGTCCACTTCCTCTGTTTTGCTAATGAGCGACCCCAAGCTCCA
AGTAACCAAAAAGTCATTGATCGCCCTGGACGAAGCTCCCGTGAAGCGAACCCAAATCTG
AGGTAGAGGCACTCCTTGTGGCTCCTCGCTCTTACAAGCATCAAACTCAAGCACACAATT
AGTGCTAGGCACTCTGCACATGCCAAACTTGAGCAGACGAGCCAAATTCTCTTTGGTAGG
GAAAACCACCTTGAGTACATTTTCTGCAATCAAAACTGGTTCCCACCTGAATGTCGAGGA
TACCAGCTCCCTTAGCTGCTGCACCACCTGCTCAACAGTCATATTTCCACGTGACACGGT
AACAGTACCAGTGAAACCTGCATCCGGTGTGTGAACCGTTGCCGTAGCAGCCGGCGACTC
AAAGAACATCAGTTCCTGACAACAAACACCATATGTGGTCACCACCGGCATTTGTCCAAT
CGTAAGAGGGCACTTAGTTGTGCCATGCTTGGGCTTCAAGCAAAACACACAAAGCTCGGC
CTTACATTCGGAGACAAAGTGCCCCGTCTCACTGCACCGATAGCATGTCATTTTCTCCTT
CTTGCGCGCCCATTTGGAGGGTCTATCACCTCCTTACCCCTTGCCAATAGCAGTGTTCTT
ATCGACTGGAATAGGATCAGCCACATTGCCATGAGCCTGGATGAGACTGGAATCCTTGTC
CGCCTCCTTTGTCGGTGCCTTGTTGGGTTCATCTTTTTCCACTGGTACATCCTGAGGAGG
TAAAGGGGGCTTCAGCTTCCTTCCTCCCCCTCGACCACCCCAGTTCTGTCTGAATCTTCC
TCTCTTCGGATTTGGAGGACCTGATATCCCCGGCACAAATTTGCCACGCGGTGCATTGAA
CCCATTGCCACCTCCTCCATTATTCTGCCATGCGTAGCCACGCCCACCGCTCGAGGAGGA
AGACCCTCGGTGCTGACCATCCCCATAGGCGTTGACACCATCATCGCCCCAAAGTCCACG
CGGCTGCTGTCTGTTGGCCTCGGCCAATGCTTGAGCGCCAGCCGATGCAGCAGAAGGCGC
CGTCCTACCAGACTGCTGGGAAGGGCGATTCCCCTGCCCCGTCAGGCGCGTTGGAGGCTG
CGCTGGTGGCGGTTGATGGCGATGACCCTGTCCTGCCATGGCCTCCGAAGAAACCCCGAT
GGGGAGTATACGTGCTGCCCTTCCCGATTTCAACGAAGGGAAGCCTTGCTTTGGTCGCTT
AGGAACCCTAGTCCCTGGCGGCAGGAGATAAGTCTCGTGCTGTACGACGATACTGCATGG
ATGGGCAACGACAGTAGCATGGGCTTTGGCCTGGTCCAAAGACCCCAATGCTACATCGGT
ATCGCATGAAGGAATATCGACACGGGCTTGGGCTTGATCCTCGGCCACATACCCAGGTTC
CACGAAACCCAAACCTGAAAGTGTCTCCTCAGGCCCGCAAACGACGCCCAAGGAATTCAA
AAAAATTCTCCTGGAATCACGCGGCTGAGCGGCGTGGCATCGTTTCTTCTTCTTCTTTTT
TGACAGGATTCCAGTAATTTTGATTGAAGAAATAGGAAAGAGTACAAGGTTGGAGATTTA
CCTTAGGGATCGGGCCGATCCATGGTTTAACCCCCTTAGTCGTTCCCATCTTCTTCTTCA
CCATCTGAATGTCCGATGCAGACTTGCTACCATGAATGATCGTAGCCGGCATCATCGAGT
TGGGTTTGTACCTCGCGTGATCATCAAAAGAAGGGCTATCCATCTCTTCCCCATCTTCAT
CTTCTTCATCCTGGTCAACCAAGACCCTGAAACGACCTCCAACCCGAGTAGATTTGATGG
TAAGGTCGCATACCGTGGCCGGCTCATTGTCGATCTTTCTCGGTGACCATGGGCTCCGCA
CGGACACACGGAATCCATCGCGAGTAGATTTGATGGTAAGATCGCATACCGTGGCCGGCT
CGTTGTCGATCTTTCTCGGTGACCATGGGCTCCGCACGGACACACGGAATCCATCGATCT
CCAGCTCGTCCCCCTCCTTGGGGATCTCATGTTGTTGCAGATAAGTTCCTGCCAAGATGT
CATGTTCATCATCTCTCACCGTAATCCAGCGCGAATCCTGGTGGAGGTAGATGAATCCAC
GACGTTCGGTTCTTGAAACCAGAGCATTGTCCATGTAGGAAATCTCCCATCTCCGATGAG
ATGCGCCATCAGCGGTAGACAAGAGAGATGCCGCAGAAAGATCTGTCCTGGTCTCCCCGC
AACGCTCCCTGCCGGCGATCTCACAGATCGCCTAGCCGATCGCCTCGGGCGGCATAGGTT
GGGTGACCAACTAAGAGCCGGTTACCTTCTCTCTCCCCTTCTCTTTCCTCTAACTAAGCA
AAATATACTACTTTATTTTTTATAACCAGCTCTATTGTACTTGCTCTTAAAAGTGTGTTA
GCCACAGAACAGTCTTGATCTTAAGGCCACTGGCGTTTAGATTCGATTGACAATGCAAAA
TGTTCAACATTTTATACCTGCGGCATATCACTCTTTTGTTACTGCAAGATGGAAATGAAC
AATTTGCAAACACTATGTTCTTGGTTGACAACATGCTTAATGTTTGCACAGCCATATAGT
GCGTTTTGATGACCGGGACCAACTGCATAGGGCCCGTATGAACAAGTGCCAATAATCCTG
TGTAAAGAAGTGTAGATTACTTCCTTTTTCAGTCACCCACAAGTTCTACACTGGGCGACA
AAACCAACAAAACTTGCACTAGATCACCATCTGCTTTGTGAAGCATAAAGGGCAGGGCTA
AAGCCTAAAGGGACTCAGCAAATTTGGTGCTGAAAGAATATGCTAAGGCGATCCCTTCCA
GCAAGTCTACAAAAAGATTAATGCCCCCTCTCAAGCTGATCCATTGTACCATCTGAGAGC
CAACCTCGTACCAATTAAACTTGGCATCCATTTGCCATGGCCTTCATCTTCATCCGCTGC
TCCCAAATATGCCCGAGAGCCGTCTTTTGCTGGAGAAGCCGTGGATGACCGGCAGAACAC
CGCGCTGAAGAGCCTCAAGCTTGGAGGGCAACGAAGCATCTTTGGCAGAGTCTCGGCATG
TCTCGTGGATCTATTACAGATATTGCAGCATCTCCCGAGCTCATCTGTATTCATGTAAAC
TTCTACTTCCTCCGTCCCATAATATAAGAACGTGTTTTAAGCTACGGAGTATGTTGGAGA
GTGATGGTAACCTGTTGGCCAAACTAGTAGTAGTATTTGTATGTTCATTTCCCTTCCCTT
TGCGTTGTTGAGCACTTGAGCGTACTTTGTAGTGACACTTGTTTTCAGTCAATTGAAGAA
CTCTGCTTCTCGTGTGCATTAACAATCATCAGGGAAGGTAAGCCACTATCGCAATAGCCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTAGAGAAGGTAAGCACAACTAAA
ACTGTTATTGTTCTCTGAATGTCCACTTCCTGAAATTTTACACACAGTGGATATGTATAG
GGCTATAGGCTCAGTCTCATCCCATGGCTACTGAATGAAGCATTGCAACACGGAGTCTAG
ACATCCATTAAGCACAACGCAGAATTCATCCAGCAACCACCAACCAAACTTTTCACTAAC
AAGGAGAAGAATTCAGACTACCATATCCACGTTTATTCTCACATACTTTTCGCTAACAAG
GAGAAGAATTTCAGCCCGCAGCCACGAACCAAACTGACCTGAAATCCTGAACCGCACACA
GGCCATGGCAGGTCCTACTCGGCTGCCGCGGGCTTGGAGAACTCGGAGATGCCGCTCCCC
TCGATCCAGTCCTCCCAGTTCCTCCCGTCCGCCTTCCTGTACTCGACGTGCGCCAGGGTG
CCGGGGTCGATGCAGGCCGCGGTGACGGCGAAGCCGTCGGGGTTGGACCTCGGGATGTAG
AACGAGGTGATCCCGCACACCTTGCAGAAGGTGTGCTTGGCCGTGTGGGTGCCGAAGGTG
TAGGTGGTGAGGAACTCGGCGGCGCCGGCCTGGAGCGCGAACTTGTCCTTGGGCACGACG
AAATGGGTGTTCCCCCGCATGGAGCAGTCGGAGCAGTTGCAGATCCACGCCACCACGCTC
GCCGGCGCCTCCACCTGCCACCGCACGCGCCGGCAGTGGCACCCGCCGCTGTGGACGACC
GCCGGCTCCGAGGCCATCGTTGTTGGTCTCTTGGGTAGAGGGGGAAATGGGGGATATGGA
TGAGCTCTTGCTCGAAACTTGTCGCTCGTCGGGTTCAGTGGTTTGTTTAGCTGCGCCGGG
CTGATGCCACGCGCTCCTCGCAAAGCGAGACACTCGTCAGCGGTGACGATGACCGGACCG
AAGCTACTGTACTGTGGTGCAGAAAGCGGGGTGAATGGTGCCGGCTGCGGCTGGGCAGCG
ACCAAAGGGCCCGGTACTTGTAGAGTAGTGGCCCAGTTAGCCGGTGATGGTTCCGCGAAA
GAGGCCCCTCACCTGCTCTGTTCGCACACCAGTTTTGACAAAATTCAGTGTTTTGACTTT
TTTAGGAAACTTGAGCATGATATTTTTTCCAACCGGGCATTCCCTTTTTTCCATTCAATT
GCACAAACGGAAAGACAACAATGTATCAAATCATTAAAGTTTTATAGACATCTAATCAAA
GGCAGCTATAAAAAAACAAATACGTGTGCTACAAATCATCCGACTGATTCGAGCATAAAC
ATAAATCACCTCCGTGGTCGTTAAATGCAATCCATTACAACCATTTGCTTTTCTCTCCAC
GGATCCCGCATCACAATCTCCGAGCCTCTCCACCATAAGTGCATGTTGCCTCCATCCATC
CCGAAGTCCGGCGCCGTCTTTCTGCCCGCTGAGGGGCTCGAGTCGGGCCCTCCTCCTCTC
CCGATCCCGCTCCTACGCGGTCACGCCGGGCCGCACCGAGGCGTCTTTGCGGGCTCGAGC
AAGCCCCCTGCGCCTTCCTCTCCTTTCGTCGCCGCCGGAGGCGTCGCGGGGCAAAGCCCT
GGCGGCACGGCGGGGCGGGACCCCTCGGTCGTCGTTCTCGAGCGTGGGGGCGGTGCTGCT
CCGCTGCTCCAGGCGGTGATGCTGCGGTGCCAGAGGATCCTCCCTTGGCTTGTGGATCTG
TGGTTGCGGCGATGAGGGCGGTGCATCGGGGTGGCAGCTCCCTGTTCGAGATATTGGCGG
GCTGCTCCTTTGGTTGTCGGCTCACGGGCGGCGCGGGCGGAGGCAGCGAGGGTCGGCCGT
CGCAAACAGCCTTTGTTGATAGTGGTGGTTGGTGTGGGGGTGTGCCATGGTGAAGGTACG
ACGGCGTGTCCGCACGCCGGTGTTTGCTGGCAATGAAATTGGTGGCTCCTGTGTGGCGGT
GGCGCCGTCGTCTCGTAGGAGGTGTGTGGGACAATGGGCTTGCGGACCGGTGGAGTTGCA
CCGCCGGTTGCGTGGGGGTGCTCGGCGAGGTGGCTCCAGGCGAAAGCCTAGACGGCACGG
CGTCCGTGGATGTCATTTTCCTCCATGGGGGTCGTTATGGAGCCTCTCCTCGCCCAGCAC
CTTCAGAGCATGGACATTGGGCGAAAGCCTAAGACTCCAAAGTGAGTCGGGTGACGGTGT
CGCTCTCCCACGTTGCTACCCCCTTGGGGCGTTACCTTGAGGGTCATCGGTCTCCCTCGT
GCTTTGCCGGAGCTGGACATGCACAACATCATGGTCGGCAGGTGCCCGACTGACGATGTG
GATGGTTGGCGTGACTTCTTGTGTGGTAACGATGGCCGCTTCGAGCGGAGTTGGTTTGCT
GCTGAGTTTTGGTAGTCGGTCTCATCCGGCGTGTTCGAGGGGTGGATGTGCCTCACTTTG
TCTTTCTGGACTCGAAGTTGTTGAGGAGGGGCCCTTGCGGCGACGATGACATGAGGCGGG
TGGTCAGTTCTGGCGCTGTCTCGGTGCAGGCTCGGTGCTTTTCTCTTGCAATGCTCGTCG
ACAGAGTTGTAACTACCTGGTAGTTGGCGCGTGCTGTTGACTGTTTGGCATTGGCCGGCA
TGGGCCTCGGCGTTTGCGTGCGGTGAGGGCTATATTGATGGTTGTCGATGGCGGAGCCGG
AGTCGCCCTTGTGTAGGCGTGATGGCGATGACACCGGGTTGCAGCATCGACGGTGTTCTC
TCCTCGACGAGGTGAGCGCGTTCTTATGTGAGTTGCCACGTCGCCCCGTGTGTCCTGTTT
GGACGTCTTGTAACGATTTTTGCCCTATTTTCCGTTTATCAACCATCCAATTCTCTTATT
AATTAATGAGATGAGGCAAAGCTTTTGCCTCCATTTCAAAATAAATAAATAAGCGCATGC
TACTACTGCCCCGCTTCTGCAAAGTTGTTGTCCACGATGCTCTCTTTCTCGCTCCACTGC
AGGACCAGCGACCCAACGATGCTCCGACAAACCTCCATTGCAACATCGACAACCCTGGCG
ATGCTTCATTAGACCCTCATCGTAGCACAGCCTGGTGCAACAGTGCTCCAACGCAGCTTC
ATTAGAGCAACTCCAACAAGCCTATCCATTCCGTTCGCGTGCGTCCATTTGATTCGCGGC
CGATAGAAAAGTCGGCCCAACACACCGACCCAAACAGACGCGCGTCCACTTTTCGTCTGC
CTGCCGACCCATTTCCGTCCCATTTTTTAGCCTGATTTGCGTCGGCGCGTCATACGTCTC
CGTCGTATCTATAATTNTTGATTGTTTTATGCCAATATTCTACAAGTTTCATATACTTTT
GGCAACTTTTNNNNNNNNNNNNNNNNNNNACATATTGATCCAGTGCCTAGTGTTAGTTCT
TGTTT